RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 ATPAF1Q5TC12 328 aaPredicted RBP14.91□□□□□ -0.02
CHD3-214ENST00000572579 STUMQ69YW2 141 aa14.91□□□□□ -0.02
CHD3-214ENST00000572579 KRT74Q7RTS7 529 aa14.91□□□□□ -0.02
CHD3-214ENST00000572579 KIR3DL3Q8N743 410 aa14.91□□□□□ -0.02
CHD3-214ENST00000572579 Q8N7P7 452 aa14.91□□□□□ -0.02
CHD3-214ENST00000572579 PNLDC1Q8NA58 520 aaKnown RBP14.91□□□□□ -0.02
CHD3-214ENST00000572579 PPP1R14AQ96A00 147 aa14.91□□□□□ -0.02
CHD3-214ENST00000572579 SLC7A6OSQ96CW6 309 aaPredicted RBP14.91□□□□□ -0.02
CHD3-214ENST00000572579 ACOXLQ9NUZ1 547 aa14.91□□□□□ -0.02
CHD3-214ENST00000572579 APOC1P02654 83 aa14.9□□□□□ -0.02
CHD3-214ENST00000572579 GMFBP60983 142 aa14.9□□□□□ -0.02
CHD3-214ENST00000572579 MICBQ29980 383 aa14.9□□□□□ -0.02
CHD3-214ENST00000572579 METTL11BQ5VVY1 283 aa14.9□□□□□ -0.02
CHD3-214ENST00000572579 ZNF454Q8N9F8 522 aa14.9□□□□□ -0.02
CHD3-214ENST00000572579 SCCPDHQ8NBX0 429 aa14.9□□□□□ -0.02
CHD3-214ENST00000572579 PAPD5Q8NDF8 572 aaKnown RBP14.9□□□□□ -0.02
CHD3-214ENST00000572579 CSNK2A3Q8NEV1 391 aa14.9□□□□□ -0.02
CHD3-214ENST00000572579 GATAD2BQ8WXI9 593 aa14.9□□□□□ -0.02
CHD3-214ENST00000572579 RAB3IPQ96QF0 476 aaPredicted RBP14.9□□□□□ -0.02
CHD3-214ENST00000572579 PKP2Q99959 881 aa14.9□□□□□ -0.02
CHD3-214ENST00000572579 SLITRK2Q9H156 845 aa14.9□□□□□ -0.02
CHD3-214ENST00000572579 SEMA6AQ9H2E6 1030 aa14.9□□□□□ -0.02
CHD3-214ENST00000572579 RGCCQ9H4X1 137 aa14.9□□□□□ -0.02
CHD3-214ENST00000572579 SNTG1Q9NSN8 517 aa14.9□□□□□ -0.02
CHD3-214ENST00000572579 VWFP04275 2813 aa14.9□□□□□ -0.02
CHD3-214ENST00000572579 TCRBV3S1A0A5B6 114 aa14.89□□□□□ -0.03
CHD3-214ENST00000572579 PSMD9O00233 223 aa14.89□□□□□ -0.03
CHD3-214ENST00000572579 RHBDL1O75783 438 aa14.89□□□□□ -0.03
CHD3-214ENST00000572579 ECDO95905 644 aaPredicted RBP14.89□□□□□ -0.03
CHD3-214ENST00000572579 IGHV4-59P01825 116 aa14.89□□□□□ -0.03
CHD3-214ENST00000572579 HMGN1P05114 100 aa14.89□□□□□ -0.03
CHD3-214ENST00000572579 CFL1P23528 166 aaKnown RBP14.89□□□□□ -0.03
CHD3-214ENST00000572579 IKZF1Q13422 519 aa14.89□□□□□ -0.03
CHD3-214ENST00000572579 PDCD1Q15116 288 aa14.89□□□□□ -0.03
CHD3-214ENST00000572579 DGUOKQ16854 277 aa14.89□□□□□ -0.03
CHD3-214ENST00000572579 C11orf91Q3C1V1 193 aa14.89□□□□□ -0.03
CHD3-214ENST00000572579 CDONQ4KMG0 1287 aa14.89□□□□□ -0.03
CHD3-214ENST00000572579 VMO1Q7Z5L0 202 aa14.89□□□□□ -0.03
CHD3-214ENST00000572579 TMEM86BQ8N661 226 aa14.89□□□□□ -0.03
CHD3-214ENST00000572579 PIGCQ92535 297 aa14.89□□□□□ -0.03
CHD3-214ENST00000572579 SP140LQ9H930 580 aa14.89□□□□□ -0.03
CHD3-214ENST00000572579 FAM206AQ9NX38 181 aa14.89□□□□□ -0.03
CHD3-214ENST00000572579 HAO2Q9NYQ3 351 aa14.89□□□□□ -0.03
CHD3-214ENST00000572579 COPS3Q9UNS2 423 aa14.89□□□□□ -0.03
CHD3-214ENST00000572579 LRP12Q9Y561 859 aa14.89□□□□□ -0.03
CHD3-214ENST00000572579 GNGT2O14610 69 aa14.88□□□□□ -0.03
CHD3-214ENST00000572579 PRODHO43272 600 aa14.88□□□□□ -0.03
CHD3-214ENST00000572579 AKR7A2O43488 359 aa14.88□□□□□ -0.03
CHD3-214ENST00000572579 FKBP6O75344 327 aa14.88□□□□□ -0.03
CHD3-214ENST00000572579 TIPRLO75663 272 aa14.88□□□□□ -0.03
CHD3-214ENST00000572579 PAICSP22234 425 aaKnown RBP14.88□□□□□ -0.03
CHD3-214ENST00000572579 IER3P46695 156 aa14.88□□□□□ -0.03
CHD3-214ENST00000572579 PSMA6P60900 246 aaKnown RBP14.88□□□□□ -0.03
CHD3-214ENST00000572579 BCDIN3DQ7Z5W3 292 aaKnown RBP14.88□□□□□ -0.03
CHD3-214ENST00000572579 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.88□□□□□ -0.03
CHD3-214ENST00000572579 ANGPTL6Q8NI99 470 aa14.88□□□□□ -0.03
CHD3-214ENST00000572579 WFDC12Q8WWY7 111 aa14.88□□□□□ -0.03
CHD3-214ENST00000572579 TNFRSF14Q92956 283 aa14.88□□□□□ -0.03
CHD3-214ENST00000572579 C12orf43Q96C57 262 aaKnown RBP14.88□□□□□ -0.03
CHD3-214ENST00000572579 RNF170Q96K19 258 aa14.88□□□□□ -0.03
CHD3-214ENST00000572579 FAM71F1Q96KD3 344 aaPredicted RBP14.88□□□□□ -0.03
CHD3-214ENST00000572579 GAFA1Q96PS6 74 aa14.88□□□□□ -0.03
CHD3-214ENST00000572579 TEAD3Q99594 435 aa14.88□□□□□ -0.03
CHD3-214ENST00000572579 MICU1Q9BPX6 476 aa14.88□□□□□ -0.03
CHD3-214ENST00000572579 DCTN5Q9BTE1 182 aa14.88□□□□□ -0.03
CHD3-214ENST00000572579 SLC25A19Q9HC21 320 aa14.88□□□□□ -0.03
CHD3-214ENST00000572579 DNAJB11Q9UBS4 358 aa14.88□□□□□ -0.03
CHD3-214ENST00000572579 MPC1Q9Y5U8 109 aa14.88□□□□□ -0.03
CHD3-214ENST00000572579 KPTNQ9Y664 436 aa14.88□□□□□ -0.03
CHD3-214ENST00000572579 RNASEK-C17orf49H0YIS7 233 aa14.87□□□□□ -0.03
CHD3-214ENST00000572579 NDUFA7O95182 113 aa14.87□□□□□ -0.03
CHD3-214ENST00000572579 IGLV3-1P01715 115 aa14.87□□□□□ -0.03
CHD3-214ENST00000572579 GNALP38405 381 aa14.87□□□□□ -0.03
CHD3-214ENST00000572579 DAPP51397 102 aa14.87□□□□□ -0.03
CHD3-214ENST00000572579 RAG2P55895 527 aa14.87□□□□□ -0.03
CHD3-214ENST00000572579 CBX1P83916 185 aa14.87□□□□□ -0.03
CHD3-214ENST00000572579 IL5RAQ01344 420 aa14.87□□□□□ -0.03
CHD3-214ENST00000572579 APOFQ13790 326 aa14.87□□□□□ -0.03
CHD3-214ENST00000572579 SLC35D3Q5M8T2 416 aa14.87□□□□□ -0.03
CHD3-214ENST00000572579 ZNF788Q6ZQV5 615 aa14.87□□□□□ -0.03
CHD3-214ENST00000572579 TRPM8Q7Z2W7 1104 aa14.87□□□□□ -0.03
CHD3-214ENST00000572579 SPATA24Q86W54 205 aa14.87□□□□□ -0.03
CHD3-214ENST00000572579 PNKDQ8N490 385 aa14.87□□□□□ -0.03
CHD3-214ENST00000572579 UTP4Q969X6 686 aaKnown RBP14.87□□□□□ -0.03
CHD3-214ENST00000572579 OR51I2Q9H344 312 aa14.87□□□□□ -0.03
CHD3-214ENST00000572579 SIRT7Q9NRC8 400 aa14.87□□□□□ -0.03
CHD3-214ENST00000572579 DNAJB9Q9UBS3 223 aa14.87□□□□□ -0.03
CHD3-214ENST00000572579 POMPQ9Y244 141 aa14.87□□□□□ -0.03
CHD3-214ENST00000572579 M0R129 80 aa14.86□□□□□ -0.03
CHD3-214ENST00000572579 MAGEB4O15481 346 aaPredicted RBP14.86□□□□□ -0.03
CHD3-214ENST00000572579 PRKYO43930 277 aa14.86□□□□□ -0.03
CHD3-214ENST00000572579 E2F6O75461 281 aa14.86□□□□□ -0.03
CHD3-214ENST00000572579 MRPL3P09001 348 aaKnown RBP14.86□□□□□ -0.03
CHD3-214ENST00000572579 ANXA8P13928 327 aa14.86□□□□□ -0.03
CHD3-214ENST00000572579 EPHA2P29317 976 aa14.86□□□□□ -0.03
CHD3-214ENST00000572579 GPM6AP51674 278 aa14.86□□□□□ -0.03
CHD3-214ENST00000572579 EFNB1P98172 346 aa14.86□□□□□ -0.03
CHD3-214ENST00000572579 FAHD1Q6P587 224 aa14.86□□□□□ -0.03
CHD3-214ENST00000572579 TREML4Q6UXN2 200 aa14.86□□□□□ -0.03
CHD3-214ENST00000572579 LDLRAD3Q86YD5 345 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms