RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 TRAV39A0A0B4J263 110 aa14.31□□□□□ -0.12
RAB40B-206ENST00000571995 EFSO43281 561 aa14.31□□□□□ -0.12
RAB40B-206ENST00000571995 ZNF44P15621 663 aa14.31□□□□□ -0.12
RAB40B-206ENST00000571995 SHBQ15464 509 aa14.31□□□□□ -0.12
RAB40B-206ENST00000571995 EXT1Q16394 746 aa14.31□□□□□ -0.12
RAB40B-206ENST00000571995 ATPAF1Q5TC12 328 aaPredicted RBP14.31□□□□□ -0.12
RAB40B-206ENST00000571995 UBALD2Q8IYN6 164 aa14.31□□□□□ -0.12
RAB40B-206ENST00000571995 NUBPLQ8TB37 319 aa14.31□□□□□ -0.12
RAB40B-206ENST00000571995 CT55Q8WUE5 264 aa14.31□□□□□ -0.12
RAB40B-206ENST00000571995 NARFLQ9H6Q4 476 aa14.31□□□□□ -0.12
RAB40B-206ENST00000571995 A0A1W2PQD3 144 aa14.31□□□□□ -0.12
RAB40B-206ENST00000571995 SWI5Q1ZZU3 235 aa14.31□□□□□ -0.12
RAB40B-206ENST00000571995 OR5L1Q8NGL2 311 aa14.31□□□□□ -0.12
RAB40B-206ENST00000571995 OR2Y1Q8NGV0 311 aa14.31□□□□□ -0.12
RAB40B-206ENST00000571995 SECTM1Q8WVN6 248 aa14.31□□□□□ -0.12
RAB40B-206ENST00000571995 USF3Q68DE3 2245 aa14.31□□□□□ -0.12
RAB40B-206ENST00000571995 RAD51DO75771 328 aa14.31□□□□□ -0.12
RAB40B-206ENST00000571995 SLC25A26Q70HW3 274 aa14.31□□□□□ -0.12
RAB40B-206ENST00000571995 OR10R2Q8NGX6 335 aa14.31□□□□□ -0.12
RAB40B-206ENST00000571995 KCNK17Q96T54 332 aa14.31□□□□□ -0.12
RAB40B-206ENST00000571995 KCNK7Q9Y2U2 307 aa14.31□□□□□ -0.12
RAB40B-206ENST00000571995 TXNDC12O95881 172 aa14.3□□□□□ -0.12
RAB40B-206ENST00000571995 ISXQ2M1V0 245 aa14.3□□□□□ -0.12
RAB40B-206ENST00000571995 C1QL2Q7Z5L3 287 aa14.3□□□□□ -0.12
RAB40B-206ENST00000571995 OR9K2Q8NGE7 335 aa14.3□□□□□ -0.12
RAB40B-206ENST00000571995 TMED6Q8WW62 240 aa14.3□□□□□ -0.12
RAB40B-206ENST00000571995 ZNF285Q96NJ3 590 aa14.3□□□□□ -0.12
RAB40B-206ENST00000571995 UCK1Q9HA47 277 aa14.3□□□□□ -0.12
RAB40B-206ENST00000571995 ZNF616Q08AN1 781 aa14.3□□□□□ -0.12
RAB40B-206ENST00000571995 ZNF626Q68DY1 528 aa14.3□□□□□ -0.12
RAB40B-206ENST00000571995 C5orf46Q6UWT4 87 aa14.3□□□□□ -0.12
RAB40B-206ENST00000571995 FOXRED1Q96CU9 486 aaPredicted RBP14.3□□□□□ -0.12
RAB40B-206ENST00000571995 IL17BQ9UHF5 180 aa14.3□□□□□ -0.12
RAB40B-206ENST00000571995 FBXO9Q9UK97 447 aaPredicted RBP14.3□□□□□ -0.12
RAB40B-206ENST00000571995 KCNS2Q9ULS6 477 aa14.3□□□□□ -0.12
RAB40B-206ENST00000571995 CBR3O75828 277 aa14.3□□□□□ -0.12
RAB40B-206ENST00000571995 IFNA21P01568 189 aa14.3□□□□□ -0.12
RAB40B-206ENST00000571995 GIPP09681 153 aaPredicted RBP14.3□□□□□ -0.12
RAB40B-206ENST00000571995 HOXC12P31275 282 aa14.3□□□□□ -0.12
RAB40B-206ENST00000571995 PDSS1Q5T2R2 415 aa14.3□□□□□ -0.12
RAB40B-206ENST00000571995 CXorf67Q86X51 503 aaPredicted RBP14.3□□□□□ -0.12
RAB40B-206ENST00000571995 EXD3Q8N9H8 876 aa14.3□□□□□ -0.12
RAB40B-206ENST00000571995 REEP6Q96HR9 211 aa14.3□□□□□ -0.12
RAB40B-206ENST00000571995 C12orf4Q9NQ89 552 aa14.3□□□□□ -0.12
RAB40B-206ENST00000571995 LEUTXA8MZ59 168 aa14.29□□□□□ -0.12
RAB40B-206ENST00000571995 DIRAS3O95661 229 aa14.29□□□□□ -0.12
RAB40B-206ENST00000571995 CELA3AP09093 270 aa14.29□□□□□ -0.12
RAB40B-206ENST00000571995 ZNF565Q8N9K5 539 aa14.29□□□□□ -0.12
RAB40B-206ENST00000571995 OR51F2Q8NH61 342 aa14.29□□□□□ -0.12
RAB40B-206ENST00000571995 POC1BQ8TC44 478 aa14.29□□□□□ -0.12
RAB40B-206ENST00000571995 ST7LQ8TDW4 575 aa14.29□□□□□ -0.12
RAB40B-206ENST00000571995 RNF133Q8WVZ7 376 aa14.29□□□□□ -0.12
RAB40B-206ENST00000571995 SLC5A7Q9GZV3 580 aa14.29□□□□□ -0.12
RAB40B-206ENST00000571995 FAM86C1Q9NVL1 165 aa14.29□□□□□ -0.12
RAB40B-206ENST00000571995 CSAG2Q9Y5P2 127 aa14.29□□□□□ -0.12
RAB40B-206ENST00000571995 EIF1BO60739 113 aaKnown RBP14.29□□□□□ -0.12
RAB40B-206ENST00000571995 MAGEA5P43359 124 aa14.29□□□□□ -0.12
RAB40B-206ENST00000571995 CAV2P51636 162 aa14.29□□□□□ -0.12
RAB40B-206ENST00000571995 HLXQ14774 488 aaPredicted RBP14.29□□□□□ -0.12
RAB40B-206ENST00000571995 COL19A1Q14993 1142 aa14.29□□□□□ -0.12
RAB40B-206ENST00000571995 IGFBP7Q16270 282 aa14.29□□□□□ -0.12
RAB40B-206ENST00000571995 SULF2Q8IWU5 870 aa14.29□□□□□ -0.12
RAB40B-206ENST00000571995 FBXL14Q8N1E6 418 aa14.29□□□□□ -0.12
RAB40B-206ENST00000571995 SEMA6DQ8NFY4 1073 aa14.29□□□□□ -0.12
RAB40B-206ENST00000571995 SLC25A43Q8WUT9 341 aaPredicted RBP14.29□□□□□ -0.12
RAB40B-206ENST00000571995 EDEM2Q9BV94 578 aa14.29□□□□□ -0.12
RAB40B-206ENST00000571995 G6PC2Q9NQR9 355 aa14.29□□□□□ -0.12
RAB40B-206ENST00000571995 SDHAF2Q9NX18 166 aa14.29□□□□□ -0.12
RAB40B-206ENST00000571995 FZR1Q9UM11 496 aa14.29□□□□□ -0.12
RAB40B-206ENST00000571995 GJE1A6NN92 205 aa14.29□□□□□ -0.12
RAB40B-206ENST00000571995 MCRIP1C9JLW8 97 aa14.29□□□□□ -0.12
RAB40B-206ENST00000571995 WNT2BQ93097 391 aa14.29□□□□□ -0.12
RAB40B-206ENST00000571995 OPN4Q9UHM6 478 aa14.29□□□□□ -0.12
RAB40B-206ENST00000571995 MCTS1Q9ULC4 181 aaKnown RBP14.29□□□□□ -0.12
RAB40B-206ENST00000571995 BOKQ9UMX3 212 aaPredicted RBP14.29□□□□□ -0.12
RAB40B-206ENST00000571995 NUP210Q8TEM1 1887 aaPredicted RBP14.28□□□□□ -0.12
RAB40B-206ENST00000571995 TRBV5-7A0A0A0MS05 114 aa14.28□□□□□ -0.12
RAB40B-206ENST00000571995 IDH3GP51553 393 aaPredicted RBP14.28□□□□□ -0.12
RAB40B-206ENST00000571995 PMP22Q01453 160 aa14.28□□□□□ -0.12
RAB40B-206ENST00000571995 IKZF1Q13422 519 aa14.28□□□□□ -0.12
RAB40B-206ENST00000571995 TSC22D1Q15714 1073 aa14.28□□□□□ -0.12
RAB40B-206ENST00000571995 BIVMQ86UB2 503 aa14.28□□□□□ -0.12
RAB40B-206ENST00000571995 GTPBP8Q8N3Z3 284 aaPredicted RBP14.28□□□□□ -0.12
RAB40B-206ENST00000571995 NKAIN3Q8N8D7 197 aa14.28□□□□□ -0.12
RAB40B-206ENST00000571995 ZNF2Q9BSG1 426 aaPredicted RBP14.28□□□□□ -0.12
RAB40B-206ENST00000571995 UFSP2Q9NUQ7 469 aa14.28□□□□□ -0.12
RAB40B-206ENST00000571995 SPAARA0A1B0GVQ0 90 aa14.28□□□□□ -0.12
RAB40B-206ENST00000571995 FTCDNL1E5RQL4 147 aa14.28□□□□□ -0.12
RAB40B-206ENST00000571995 XRCC2O43543 280 aa14.28□□□□□ -0.12
RAB40B-206ENST00000571995 GSTZ1O43708 216 aaPredicted RBP14.28□□□□□ -0.12
RAB40B-206ENST00000571995 GLP1RP43220 463 aa14.28□□□□□ -0.12
RAB40B-206ENST00000571995 IL11RAQ14626 422 aa14.28□□□□□ -0.12
RAB40B-206ENST00000571995 OR56B1Q8NGI3 324 aa14.28□□□□□ -0.12
RAB40B-206ENST00000571995 RBPMSQ93062 196 aaKnown RBP14.28□□□□□ -0.12
RAB40B-206ENST00000571995 TRAF3IP2O43734 574 aaPredicted RBP14.28□□□□□ -0.12
RAB40B-206ENST00000571995 TGM6O95932 706 aa14.28□□□□□ -0.12
RAB40B-206ENST00000571995 PTGS2P35354 604 aa14.28□□□□□ -0.12
RAB40B-206ENST00000571995 ZNF684Q5T5D7 378 aa14.28□□□□□ -0.12
RAB40B-206ENST00000571995 ZNF700Q9H0M5 742 aa14.28□□□□□ -0.12
RAB40B-206ENST00000571995 VSIG4Q9Y279 399 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms