RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 OR10K2Q6IF99 312 aa16.81■□□□□ 0.28
RPAIN-210ENST00000571613 ZNF610Q8N9Z0 462 aa16.81■□□□□ 0.28
RPAIN-210ENST00000571613 TNFAIP8L1Q8WVP5 186 aa16.81■□□□□ 0.28
RPAIN-210ENST00000571613 SLX1AQ9BQ83 275 aa16.81■□□□□ 0.28
RPAIN-210ENST00000571613 TMEM59Q9BXS4 323 aa16.81■□□□□ 0.28
RPAIN-210ENST00000571613 DPAGT1Q9H3H5 408 aa16.81■□□□□ 0.28
RPAIN-210ENST00000571613 CDH20Q9HBT6 801 aa16.81■□□□□ 0.28
RPAIN-210ENST00000571613 MTFP1Q9UDX5 166 aa16.81■□□□□ 0.28
RPAIN-210ENST00000571613 GTF3C1Q12789 2109 aa16.81■□□□□ 0.28
RPAIN-210ENST00000571613 KDM4BO94953 1096 aa16.81■□□□□ 0.28
RPAIN-210ENST00000571613 FAM157BP0CG42 384 aa16.81■□□□□ 0.28
RPAIN-210ENST00000571613 CCL2P13500 99 aa16.81■□□□□ 0.28
RPAIN-210ENST00000571613 FAUP35544 74 aaKnown RBP16.81■□□□□ 0.28
RPAIN-210ENST00000571613 ACTBP60709 375 aa16.81■□□□□ 0.28
RPAIN-210ENST00000571613 ACTG1P63261 375 aa16.81■□□□□ 0.28
RPAIN-210ENST00000571613 RBPJQ06330 500 aa16.81■□□□□ 0.28
RPAIN-210ENST00000571613 RNASE12Q5GAN4 147 aaKnown RBP16.81■□□□□ 0.28
RPAIN-210ENST00000571613 CADM3Q8N126 398 aa16.81■□□□□ 0.28
RPAIN-210ENST00000571613 STEAP2Q8NFT2 490 aa16.81■□□□□ 0.28
RPAIN-210ENST00000571613 CREB3L1Q96BA8 519 aa16.81■□□□□ 0.28
RPAIN-210ENST00000571613 PCDHB16Q9NRJ7 776 aa16.81■□□□□ 0.28
RPAIN-210ENST00000571613 NPAP1Q9NZP6 1156 aa16.81■□□□□ 0.28
RPAIN-210ENST00000571613 AMDHD2Q9Y303 409 aa16.81■□□□□ 0.28
RPAIN-210ENST00000571613 ANKRD20A5PA0PJZ0 165 aa16.8■□□□□ 0.28
RPAIN-210ENST00000571613 ZNF780AO75290 641 aaPredicted RBP16.8■□□□□ 0.28
RPAIN-210ENST00000571613 TOXO94900 526 aa16.8■□□□□ 0.28
RPAIN-210ENST00000571613 CST4P01036 141 aa16.8■□□□□ 0.28
RPAIN-210ENST00000571613 CSF1P09603 554 aa16.8■□□□□ 0.28
RPAIN-210ENST00000571613 SRP9P49458 86 aaKnown RBP16.8■□□□□ 0.28
RPAIN-210ENST00000571613 BIVMQ86UB2 503 aa16.8■□□□□ 0.28
RPAIN-210ENST00000571613 FAM169BQ8N8A8 192 aa16.8■□□□□ 0.28
RPAIN-210ENST00000571613 OR56B1Q8NGI3 324 aa16.8■□□□□ 0.28
RPAIN-210ENST00000571613 UBASH3BQ8TF42 649 aa16.8■□□□□ 0.28
RPAIN-210ENST00000571613 NPRL2Q8WTW4 380 aa16.8■□□□□ 0.28
RPAIN-210ENST00000571613 PIGCQ92535 297 aa16.8■□□□□ 0.28
RPAIN-210ENST00000571613 C1orf147Q96MC9 270 aaPredicted RBP16.8■□□□□ 0.28
RPAIN-210ENST00000571613 NLKQ9UBE8 527 aa16.8■□□□□ 0.28
RPAIN-210ENST00000571613 ZNF107Q9UII5 783 aaPredicted RBP16.8■□□□□ 0.28
RPAIN-210ENST00000571613 ING4Q9UNL4 249 aa16.8■□□□□ 0.28
RPAIN-210ENST00000571613 STARD10Q9Y365 291 aa16.8■□□□□ 0.28
RPAIN-210ENST00000571613 ZFHX4Q86UP3 3567 aa16.8■□□□□ 0.28
RPAIN-210ENST00000571613 RAB27BO00194 218 aa16.79■□□□□ 0.28
RPAIN-210ENST00000571613 CDC14BO60729 498 aa16.79■□□□□ 0.28
RPAIN-210ENST00000571613 IGKV3-15P01624 115 aa16.79■□□□□ 0.28
RPAIN-210ENST00000571613 LPLP06858 475 aa16.79■□□□□ 0.28
RPAIN-210ENST00000571613 TUBG1P23258 451 aa16.79■□□□□ 0.28
RPAIN-210ENST00000571613 ARL6IP1Q15041 203 aa16.79■□□□□ 0.28
RPAIN-210ENST00000571613 PLCXD3Q63HM9 321 aa16.79■□□□□ 0.28
RPAIN-210ENST00000571613 GFRALQ6UXV0 394 aa16.79■□□□□ 0.28
RPAIN-210ENST00000571613 BHLHA15Q7RTS1 189 aaPredicted RBP16.79■□□□□ 0.28
RPAIN-210ENST00000571613 CELF2-AS1Q8N7Q2 184 aa16.79■□□□□ 0.28
RPAIN-210ENST00000571613 GPX8Q8TED1 209 aa16.79■□□□□ 0.28
RPAIN-210ENST00000571613 MS4A3Q96HJ5 214 aa16.79■□□□□ 0.28
RPAIN-210ENST00000571613 MARVELD1Q9BSK0 173 aa16.79■□□□□ 0.28
RPAIN-210ENST00000571613 TUBG2Q9NRH3 451 aa16.79■□□□□ 0.28
RPAIN-210ENST00000571613 MYEF2Q9P2K5 600 aaKnown RBP16.79■□□□□ 0.28
RPAIN-210ENST00000571613 KLK11Q9UBX7 282 aa16.79■□□□□ 0.28
RPAIN-210ENST00000571613 CRTAPO75718 401 aaPredicted RBP16.78■□□□□ 0.28
RPAIN-210ENST00000571613 MPIG6BO95866 241 aa16.78■□□□□ 0.28
RPAIN-210ENST00000571613 MELTFP08582 738 aa16.78■□□□□ 0.28
RPAIN-210ENST00000571613 FAM87AP0C7U9 286 aa16.78■□□□□ 0.28
RPAIN-210ENST00000571613 OPRM1P35372 400 aa16.78■□□□□ 0.28
RPAIN-210ENST00000571613 WNT5AP41221 380 aa16.78■□□□□ 0.28
RPAIN-210ENST00000571613 LINC00303Q3SY05 128 aa16.78■□□□□ 0.28
RPAIN-210ENST00000571613 PLA1AQ53H76 456 aa16.78■□□□□ 0.28
RPAIN-210ENST00000571613 MOB3CQ70IA8 216 aa16.78■□□□□ 0.28
RPAIN-210ENST00000571613 ZNF554Q86TJ5 538 aa16.78■□□□□ 0.28
RPAIN-210ENST00000571613 CXorf67Q86X51 503 aaPredicted RBP16.78■□□□□ 0.28
RPAIN-210ENST00000571613 C1orf174Q8IYL3 243 aa16.78■□□□□ 0.28
RPAIN-210ENST00000571613 OR56B2PQ8NGI1 322 aa16.78■□□□□ 0.28
RPAIN-210ENST00000571613 OR10R2Q8NGX6 335 aa16.78■□□□□ 0.28
RPAIN-210ENST00000571613 CHAC2Q8WUX2 184 aa16.78■□□□□ 0.28
RPAIN-210ENST00000571613 METTL9Q9H1A3 318 aa16.78■□□□□ 0.28
RPAIN-210ENST00000571613 LPAR5Q9H1C0 372 aa16.78■□□□□ 0.28
RPAIN-210ENST00000571613 OPN3Q9H1Y3 402 aaPredicted RBP16.78■□□□□ 0.28
RPAIN-210ENST00000571613 MMP28Q9H239 520 aa16.78■□□□□ 0.28
RPAIN-210ENST00000571613 PIGMQ9H3S5 423 aa16.78■□□□□ 0.28
RPAIN-210ENST00000571613 PTTG3PQ9NZH4 202 aa16.78■□□□□ 0.28
RPAIN-210ENST00000571613 NUBP2Q9Y5Y2 271 aa16.78■□□□□ 0.28
RPAIN-210ENST00000571613 ASPMQ8IZT6 3477 aa16.78■□□□□ 0.28
RPAIN-210ENST00000571613 FAM230AA0A1W2PPH8 454 aa16.78■□□□□ 0.28
RPAIN-210ENST00000571613 IDH3GP51553 393 aaPredicted RBP16.78■□□□□ 0.28
RPAIN-210ENST00000571613 ZP1P60852 638 aa16.78■□□□□ 0.28
RPAIN-210ENST00000571613 SLC22A6Q4U2R8 563 aa16.78■□□□□ 0.28
RPAIN-210ENST00000571613 RSBN1Q5VWQ0 802 aaPredicted RBP16.78■□□□□ 0.28
RPAIN-210ENST00000571613 OLFML2AQ68BL7 652 aa16.78■□□□□ 0.28
RPAIN-210ENST00000571613 WDR31Q8NA23 367 aa16.78■□□□□ 0.28
RPAIN-210ENST00000571613 ACBD4Q8NC06 268 aa16.78■□□□□ 0.28
RPAIN-210ENST00000571613 PXT1Q8NFP0 134 aa16.78■□□□□ 0.28
RPAIN-210ENST00000571613 AQP3Q92482 292 aa16.78■□□□□ 0.28
RPAIN-210ENST00000571613 HIST1H2AAQ96QV6 131 aa16.78■□□□□ 0.28
RPAIN-210ENST00000571613 ZNF835Q9Y2P0 537 aa16.78■□□□□ 0.28
RPAIN-210ENST00000571613 OR5H1A6NKK0 313 aa16.77■□□□□ 0.28
RPAIN-210ENST00000571613 MSTNO14793 375 aa16.77■□□□□ 0.28
RPAIN-210ENST00000571613 NGFP01138 241 aa16.77■□□□□ 0.28
RPAIN-210ENST00000571613 GSTP1P09211 210 aaKnown RBP16.77■□□□□ 0.28
RPAIN-210ENST00000571613 TMEM225BP0DP42 221 aa16.77■□□□□ 0.28
RPAIN-210ENST00000571613 GLI4P10075 376 aa16.77■□□□□ 0.28
RPAIN-210ENST00000571613 VEGFCP49767 419 aa16.77■□□□□ 0.28
RPAIN-210ENST00000571613 BTG1P62324 171 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms