RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 SKA3Q8IX90 412 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 C20orf196Q8IYI0 205 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 ZNF101Q8IZC7 436 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 SPARTQ8N0X7 666 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 LINC00482Q8N8I6 264 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 RHOXF1Q8NHV9 184 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 OIT3Q8WWZ8 545 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 MEGF10Q96KG7 1140 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 PRRC1Q96M27 445 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 OR2M2Q96R28 347 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 SDF2Q99470 211 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 DDOQ99489 341 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 NKX3-1Q99801 234 aaPredicted RBP5.6□□□□□ -1.51
CHD3-213ENST00000571249 DCTN5Q9BTE1 182 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 SLC19A3Q9BZV2 496 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 NPFFR1Q9GZQ6 430 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 ZNF350Q9GZX5 532 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 MAN2C1Q9NTJ4 1040 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 FKBP14Q9NWM8 211 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 PTTG2Q9NZH5 202 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 MKLN1Q9UL63 735 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 IFT52Q9Y366 437 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 MAB21L2Q9Y586 359 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 A0A1W2PRD5 423 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 A0A1W2PRF3 423 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 A0A1W2PRM7 423 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 ZAR1LA6NP61 321 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 H3BSA7 217 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 J3KTA2 159 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 TSPAN4O14817 238 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 MPZL2O60487 215 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 FMO6PO60774 539 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 RAMP3O60896 148 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 WBP4O75554 376 aaKnown RBP5.59□□□□□ -1.51
CHD3-213ENST00000571249 CYB5R3P00387 301 aaPredicted RBP5.59□□□□□ -1.51
CHD3-213ENST00000571249 PAHP00439 452 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 CLEC3BP05452 202 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 IL7RP16871 459 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 DCKP27707 260 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 CRISP1P54107 249 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 PRB3Q04118 309 aaPredicted RBP5.59□□□□□ -1.51
CHD3-213ENST00000571249 C1DQ13901 141 aaKnown RBP5.59□□□□□ -1.51
CHD3-213ENST00000571249 NPTX1Q15818 432 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 MAPK14Q16539 360 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 TBC1D28Q2M2D7 210 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 GPAT3Q53EU6 434 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 ZMAT1Q5H9K5 638 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 ENTPD8Q5MY95 495 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 SLC25A30Q5SVS4 291 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 TYW3Q6IPR3 259 aaKnown RBP5.59□□□□□ -1.51
CHD3-213ENST00000571249 C1orf94Q6P1W5 598 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 KCTD8Q6ZWB6 473 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 ZNF627Q7L945 461 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 C16orf62Q7Z3J2 963 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 GPR141Q7Z602 305 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 VRK2Q86Y07 508 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 RBM45Q8IUH3 476 aaKnown RBP5.59□□□□□ -1.51
CHD3-213ENST00000571249 ENTHD1Q8IYW4 607 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 TMEM123Q8N131 208 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 DTX3Q8N9I9 347 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 FAM71CQ8NEG0 241 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 OR6T1Q8NGN1 323 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 OR1J2Q8NGS2 313 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 OR13F1Q8NGS4 319 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 SLC25A40Q8TBP6 338 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 SLC7A13Q8TCU3 470 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 KLF14Q8TD94 323 aaPredicted RBP5.59□□□□□ -1.51
CHD3-213ENST00000571249 APH1BQ8WW43 257 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 ITLN1Q8WWA0 313 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 SLC35B4Q969S0 331 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 TECTBQ96PL2 329 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 TSC22D3Q99576 134 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 NIPSNAP1Q9BPW8 284 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 WFDC6Q9BQY6 131 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 YIPF3Q9GZM5 350 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 RIBC2Q9H4K1 309 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 ZNF702PQ9H963 129 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 ZNF556Q9HAH1 456 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 CCNB1IP1Q9NPC3 277 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 SCN3BQ9NY72 215 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 TMCC3Q9ULS5 477 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 HSF4Q9ULV5 492 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 SLC35A3Q9Y2D2 325 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 TPRKBQ9Y3C4 175 aa5.59□□□□□ -1.51
CHD3-213ENST00000571249 TRBV4-1A0A0J9YWV2 114 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 PRSS29PA6NIE9 313 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 TPST2O60704 377 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 STX11O75558 287 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 OR5F1O95221 314 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 THY1P04216 161 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 DBIP07108 87 aaKnown RBP5.58□□□□□ -1.52
CHD3-213ENST00000571249 DBHP09172 617 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 PNMTP11086 282 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 GSTM3P21266 225 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 CCNOP22674 350 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 CXCR1P25024 350 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 YAP1P46937 504 aaKnown RBP5.58□□□□□ -1.52
CHD3-213ENST00000571249 TMBIM6P55061 237 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 SNRPGP62308 76 aaKnown RBP5.58□□□□□ -1.52
CHD3-213ENST00000571249 EFNB1P98172 346 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms