RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 DOCK7Q96N67 2140 aa15.05■□□□□ -0
RPAIN-208ENST00000571043 GPER1Q99527 375 aa15.05■□□□□ -0
RPAIN-208ENST00000571043 C1QTNF5Q9BXJ0 243 aa15.05■□□□□ -0
RPAIN-208ENST00000571043 GHITMQ9H3K2 345 aa15.05■□□□□ -0
RPAIN-208ENST00000571043 NEK6Q9HC98 313 aa15.05■□□□□ -0
RPAIN-208ENST00000571043 MYEF2Q9P2K5 600 aaKnown RBP15.05■□□□□ -0
RPAIN-208ENST00000571043 A0A0A6YYJ9 748 aa15.04■□□□□ -0
RPAIN-208ENST00000571043 XRCC2O43543 280 aa15.04■□□□□ -0
RPAIN-208ENST00000571043 MELTFP08582 738 aa15.04■□□□□ -0
RPAIN-208ENST00000571043 ARR3P36575 388 aa15.04■□□□□ -0
RPAIN-208ENST00000571043 OR3A4PP47883 348 aa15.04■□□□□ -0
RPAIN-208ENST00000571043 FAPQ12884 760 aa15.04■□□□□ -0
RPAIN-208ENST00000571043 KISS1Q15726 138 aa15.04■□□□□ -0
RPAIN-208ENST00000571043 MOGAT2Q3SYC2 334 aa15.04■□□□□ -0
RPAIN-208ENST00000571043 ZNF260Q3ZCT1 412 aa15.04■□□□□ -0
RPAIN-208ENST00000571043 TMEM255AQ5JRV8 349 aa15.04■□□□□ -0
RPAIN-208ENST00000571043 COLCA1Q6ZS62 124 aa15.04■□□□□ -0
RPAIN-208ENST00000571043 TMEM229BQ8NBD8 167 aa15.04■□□□□ -0
RPAIN-208ENST00000571043 CPEB3Q8NE35 698 aaKnown RBP15.04■□□□□ -0
RPAIN-208ENST00000571043 ITFG2Q969R8 447 aa15.04■□□□□ -0
RPAIN-208ENST00000571043 SPSB1Q96BD6 273 aa15.04■□□□□ -0
RPAIN-208ENST00000571043 SPACA5Q96QH8 159 aa15.04■□□□□ -0
RPAIN-208ENST00000571043 C20orf85Q9H1P6 137 aa15.04■□□□□ -0
RPAIN-208ENST00000571043 ZNF835Q9Y2P0 537 aa15.04■□□□□ -0
RPAIN-208ENST00000571043 ESPL1Q14674 2120 aa15.04■□□□□ -0
RPAIN-208ENST00000571043 FAM208BQ5VWN6 2430 aa15.04■□□□□ -0
RPAIN-208ENST00000571043 PHF3Q92576 2039 aaKnown RBP15.03■□□□□ -0
RPAIN-208ENST00000571043 CHD6Q8TD26 2715 aa15.03■□□□□ -0
RPAIN-208ENST00000571043 PRAF2O60831 178 aa15.03■□□□□ -0
RPAIN-208ENST00000571043 SS18L1O75177 396 aaPredicted RBP15.03■□□□□ -0
RPAIN-208ENST00000571043 AKAIN1P0CW23 69 aa15.03■□□□□ -0
RPAIN-208ENST00000571043 NAT2P11245 290 aa15.03■□□□□ -0
RPAIN-208ENST00000571043 MPGP29372 298 aa15.03■□□□□ -0
RPAIN-208ENST00000571043 OR3A2P47893 321 aa15.03■□□□□ -0
RPAIN-208ENST00000571043 GSG1Q2KHT4 349 aa15.03■□□□□ -0
RPAIN-208ENST00000571043 FBXW9Q5XUX1 488 aa15.03■□□□□ -0
RPAIN-208ENST00000571043 RNF144BQ7Z419 303 aa15.03■□□□□ -0
RPAIN-208ENST00000571043 TCTE3Q8IZS6 198 aa15.03■□□□□ -0
RPAIN-208ENST00000571043 ACBD4Q8NC06 268 aa15.03■□□□□ -0
RPAIN-208ENST00000571043 OR5M9Q8NGP3 310 aa15.03■□□□□ -0
RPAIN-208ENST00000571043 FAM57AQ8TBR7 257 aa15.03■□□□□ -0
RPAIN-208ENST00000571043 SPSB4Q96A44 273 aa15.03■□□□□ -0
RPAIN-208ENST00000571043 GAL3ST1Q99999 423 aa15.03■□□□□ -0
RPAIN-208ENST00000571043 LPAR5Q9H1C0 372 aa15.03■□□□□ -0
RPAIN-208ENST00000571043 MOV10Q9HCE1 1003 aaKnown RBP15.03■□□□□ -0
RPAIN-208ENST00000571043 MCUBQ9NWR8 336 aa15.03■□□□□ -0
RPAIN-208ENST00000571043 B3GNT2Q9NY97 397 aa15.03■□□□□ -0
RPAIN-208ENST00000571043 CLCF1Q9UBD9 225 aa15.03■□□□□ -0
RPAIN-208ENST00000571043 PCNX1Q96RV3 2341 aa15.03■□□□□ -0
RPAIN-208ENST00000571043 MYO7BQ6PIF6 2116 aa15.03■□□□□ -0
RPAIN-208ENST00000571043 A0A096LPE4 126 aa15.02■□□□□ -0
RPAIN-208ENST00000571043 hCG_38984A0A1B0GV85 526 aa15.02■□□□□ -0
RPAIN-208ENST00000571043 A0A1W2PPZ6 126 aa15.02■□□□□ -0
RPAIN-208ENST00000571043 CDC14BO60729 498 aa15.02■□□□□ -0
RPAIN-208ENST00000571043 PEX14O75381 377 aa15.02■□□□□ -0
RPAIN-208ENST00000571043 NDUFB6O95139 128 aa15.02■□□□□ -0
RPAIN-208ENST00000571043 GTF2F2P13984 249 aa15.02■□□□□ -0
RPAIN-208ENST00000571043 PRKACBP22694 351 aa15.02■□□□□ -0
RPAIN-208ENST00000571043 ACKR3P25106 362 aa15.02■□□□□ -0
RPAIN-208ENST00000571043 PTGFRP43088 359 aa15.02■□□□□ -0
RPAIN-208ENST00000571043 FOXG1P55316 489 aaPredicted RBP15.02■□□□□ -0
RPAIN-208ENST00000571043 TAS2R19P59542 299 aa15.02■□□□□ -0
RPAIN-208ENST00000571043 SF3B4Q15427 424 aaKnown RBP eCLIP15.02■□□□□ -05e-17■■■■■ 28.1
RPAIN-208ENST00000571043 C9orf135Q5VTT2 229 aa15.02■□□□□ -0
RPAIN-208ENST00000571043 TMEM42Q69YG0 159 aa15.02■□□□□ -0
RPAIN-208ENST00000571043 TMEM53Q6P2H8 277 aa15.02■□□□□ -0
RPAIN-208ENST00000571043 CRIP3Q6Q6R5 217 aa15.02■□□□□ -0
RPAIN-208ENST00000571043 Q6ZTK2 550 aa15.02■□□□□ -0
RPAIN-208ENST00000571043 P4HA3Q7Z4N8 544 aa15.02■□□□□ -0
RPAIN-208ENST00000571043 ST6GALNAC3Q8NDV1 305 aa15.02■□□□□ -0
RPAIN-208ENST00000571043 OR10R2Q8NGX6 335 aa15.02■□□□□ -0
RPAIN-208ENST00000571043 OR2AE1Q8NHA4 323 aa15.02■□□□□ -0
RPAIN-208ENST00000571043 CPNE2Q96FN4 548 aaPredicted RBP15.02■□□□□ -0
RPAIN-208ENST00000571043 CST11Q9H112 138 aa15.02■□□□□ -0
RPAIN-208ENST00000571043 INTS1Q8N201 2190 aaKnown RBP15.02□□□□□ -0.01
RPAIN-208ENST00000571043 WDR1O75083 606 aa15.02□□□□□ -0.01
RPAIN-208ENST00000571043 TPOP07202 933 aa15.02□□□□□ -0.01
RPAIN-208ENST00000571043 MECP2P51608 486 aaKnown RBP15.02□□□□□ -0.01
RPAIN-208ENST00000571043 CNN3Q15417 329 aaKnown RBP15.02□□□□□ -0.01
RPAIN-208ENST00000571043 ZFP69Q49AA0 526 aa15.02□□□□□ -0.01
RPAIN-208ENST00000571043 CDNFQ49AH0 187 aa15.02□□□□□ -0.01
RPAIN-208ENST00000571043 CLVS2Q5SYC1 327 aa15.02□□□□□ -0.01
RPAIN-208ENST00000571043 ZBTB37Q5TC79 503 aa15.02□□□□□ -0.01
RPAIN-208ENST00000571043 ZBTB8BQ8NAP8 495 aaPredicted RBP15.02□□□□□ -0.01
RPAIN-208ENST00000571043 OR4C16Q8NGL9 310 aa15.02□□□□□ -0.01
RPAIN-208ENST00000571043 URM1Q9BTM9 101 aaKnown RBP15.02□□□□□ -0.01
RPAIN-208ENST00000571043 TMEM59Q9BXS4 323 aa15.02□□□□□ -0.01
RPAIN-208ENST00000571043 OR51J1Q9H342 316 aa15.02□□□□□ -0.01
RPAIN-208ENST00000571043 RANGRFQ9HD47 186 aaPredicted RBP15.02□□□□□ -0.01
RPAIN-208ENST00000571043 ING3Q9NXR8 418 aa15.02□□□□□ -0.01
RPAIN-208ENST00000571043 PRSS50Q9UI38 385 aa15.02□□□□□ -0.01
RPAIN-208ENST00000571043 WIPF3A6NGB9 483 aa15.01□□□□□ -0.01
RPAIN-208ENST00000571043 A8MV72 311 aaPredicted RBP15.01□□□□□ -0.01
RPAIN-208ENST00000571043 MPIG6BO95866 241 aa15.01□□□□□ -0.01
RPAIN-208ENST00000571043 HLA-HP01893 362 aa15.01□□□□□ -0.01
RPAIN-208ENST00000571043 HOXD4P09016 255 aaPredicted RBP15.01□□□□□ -0.01
RPAIN-208ENST00000571043 STOMP27105 288 aa15.01□□□□□ -0.01
RPAIN-208ENST00000571043 RCVRNP35243 200 aa15.01□□□□□ -0.01
RPAIN-208ENST00000571043 PTGER4P35408 488 aa15.01□□□□□ -0.01
RPAIN-208ENST00000571043 VEGFCP49767 419 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms