RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 ESPL1Q14674 2120 aa13.55□□□□□ -0.24
USP43-202ENST00000570475 C5orf63A6NC05 138 aa13.55□□□□□ -0.24
USP43-202ENST00000570475 LILRA5A6NI73 299 aa13.55□□□□□ -0.24
USP43-202ENST00000570475 H0YIZ8 118 aa13.55□□□□□ -0.24
USP43-202ENST00000570475 TXNL1O43396 289 aa13.55□□□□□ -0.24
USP43-202ENST00000570475 SSX5O60225 188 aa13.55□□□□□ -0.24
USP43-202ENST00000570475 FCGR2CP31995 323 aa13.55□□□□□ -0.24
USP43-202ENST00000570475 MMP16P51512 607 aa13.55□□□□□ -0.24
USP43-202ENST00000570475 CAV2P51636 162 aa13.55□□□□□ -0.24
USP43-202ENST00000570475 FLI1Q01543 452 aaPredicted RBP13.55□□□□□ -0.24
USP43-202ENST00000570475 MFSD8Q8NHS3 518 aa13.55□□□□□ -0.24
USP43-202ENST00000570475 ZC3H10Q96K80 434 aaKnown RBP13.55□□□□□ -0.24
USP43-202ENST00000570475 CFAP54Q96N23 3096 aa13.54□□□□□ -0.24
USP43-202ENST00000570475 PET100P0DJ07 73 aa13.54□□□□□ -0.24
USP43-202ENST00000570475 IGFBP3P17936 291 aaPredicted RBP13.54□□□□□ -0.24
USP43-202ENST00000570475 CLINT1Q14677 625 aa13.54□□□□□ -0.24
USP43-202ENST00000570475 KCNK17Q96T54 332 aa13.54□□□□□ -0.24
USP43-202ENST00000570475 UQCC1Q9NVA1 299 aa13.54□□□□□ -0.24
USP43-202ENST00000570475 FAM206AQ9NX38 181 aa13.54□□□□□ -0.24
USP43-202ENST00000570475 B3GALT5Q9Y2C3 310 aa13.54□□□□□ -0.24
USP43-202ENST00000570475 WIPF3A6NGB9 483 aa13.54□□□□□ -0.24
USP43-202ENST00000570475 JMJD7P0C870 316 aa13.54□□□□□ -0.24
USP43-202ENST00000570475 SPP1P10451 314 aa13.54□□□□□ -0.24
USP43-202ENST00000570475 HNF4GQ14541 408 aa13.54□□□□□ -0.24
USP43-202ENST00000570475 FAM166AQ6J272 317 aa13.54□□□□□ -0.24
USP43-202ENST00000570475 SLC25A24Q6NUK1 477 aa13.54□□□□□ -0.24
USP43-202ENST00000570475 SLC38A9Q8NBW4 561 aa13.54□□□□□ -0.24
USP43-202ENST00000570475 PURGQ9UJV8 347 aaKnown RBP13.54□□□□□ -0.24
USP43-202ENST00000570475 FBXO7Q9Y3I1 522 aa13.54□□□□□ -0.24
USP43-202ENST00000570475 GDF9O60383 454 aa13.53□□□□□ -0.24
USP43-202ENST00000570475 CD8AP01732 235 aa13.53□□□□□ -0.24
USP43-202ENST00000570475 CD74P04233 296 aa13.53□□□□□ -0.24
USP43-202ENST00000570475 SFTA3P0C7M3 94 aa13.53□□□□□ -0.24
USP43-202ENST00000570475 MECP2P51608 486 aaKnown RBP13.53□□□□□ -0.24
USP43-202ENST00000570475 OR2B8PP59922 312 aa13.53□□□□□ -0.24
USP43-202ENST00000570475 C1orf100Q5SVJ3 147 aa13.53□□□□□ -0.24
USP43-202ENST00000570475 ADAM5Q6NVV9 412 aa13.53□□□□□ -0.24
USP43-202ENST00000570475 FDX2Q6P4F2 183 aa13.53□□□□□ -0.24
USP43-202ENST00000570475 RNASE11Q8TAA1 199 aaKnown RBP13.53□□□□□ -0.24
USP43-202ENST00000570475 SECTM1Q8WVN6 248 aa13.53□□□□□ -0.24
USP43-202ENST00000570475 EDAQ92838 391 aa13.53□□□□□ -0.24
USP43-202ENST00000570475 FAAP24Q9BTP7 215 aa13.53□□□□□ -0.24
USP43-202ENST00000570475 AKIRIN1Q9H9L7 192 aaPredicted RBP13.53□□□□□ -0.24
USP43-202ENST00000570475 LHFPL6Q9Y693 200 aa13.53□□□□□ -0.24
USP43-202ENST00000570475 CACNA1DQ01668 2161 aa13.53□□□□□ -0.24
USP43-202ENST00000570475 LIPT2A6NK58 231 aa13.53□□□□□ -0.24
USP43-202ENST00000570475 CRYBA1P05813 215 aa13.53□□□□□ -0.24
USP43-202ENST00000570475 OR13C7P0DN81 318 aa13.53□□□□□ -0.24
USP43-202ENST00000570475 RPL12P30050 165 aaKnown RBP13.53□□□□□ -0.24
USP43-202ENST00000570475 SNRPEP62304 92 aaKnown RBP13.53□□□□□ -0.24
USP43-202ENST00000570475 ARHGEF39Q8N4T4 335 aa13.53□□□□□ -0.24
USP43-202ENST00000570475 ZNF442Q9H7R0 627 aa13.53□□□□□ -0.24
USP43-202ENST00000570475 RARRES3Q9UL19 164 aa13.53□□□□□ -0.24
USP43-202ENST00000570475 KCNIP3Q9Y2W7 256 aa13.53□□□□□ -0.24
USP43-202ENST00000570475 GPR179Q6PRD1 2367 aa13.53□□□□□ -0.24
USP43-202ENST00000570475 ANKUB1A6NFN9 424 aa13.53□□□□□ -0.24
USP43-202ENST00000570475 C1QL1O75973 258 aa13.53□□□□□ -0.24
USP43-202ENST00000570475 SFT2D2O95562 160 aa13.53□□□□□ -0.24
USP43-202ENST00000570475 MUC1P15941 1255 aaPredicted RBP13.53□□□□□ -0.24
USP43-202ENST00000570475 CSRP1P21291 193 aaKnown RBP13.53□□□□□ -0.24
USP43-202ENST00000570475 EIF5AP63241 154 aaKnown RBP13.53□□□□□ -0.24
USP43-202ENST00000570475 THEM4Q5T1C6 240 aa13.53□□□□□ -0.24
USP43-202ENST00000570475 AVPI1Q5T686 147 aa13.53□□□□□ -0.24
USP43-202ENST00000570475 SEMA6DQ8NFY4 1073 aa13.53□□□□□ -0.24
USP43-202ENST00000570475 OR5L2Q8NGL0 311 aa13.53□□□□□ -0.24
USP43-202ENST00000570475 MED9Q9NWA0 146 aa13.53□□□□□ -0.24
USP43-202ENST00000570475 ALKBH4Q9NXW9 302 aa13.53□□□□□ -0.24
USP43-202ENST00000570475 AMDHD2Q9Y303 409 aa13.53□□□□□ -0.24
USP43-202ENST00000570475 PRRC2CQ9Y520 2896 aaKnown RBP13.53□□□□□ -0.24
USP43-202ENST00000570475 GVINP1Q7Z2Y8 2422 aa13.53□□□□□ -0.24
USP43-202ENST00000570475 A0A1B0GTI1 187 aa13.52□□□□□ -0.24
USP43-202ENST00000570475 TIAF1O95411 115 aa13.52□□□□□ -0.24
USP43-202ENST00000570475 CELA2AP08217 269 aa13.52□□□□□ -0.24
USP43-202ENST00000570475 FSTP19883 344 aa13.52□□□□□ -0.24
USP43-202ENST00000570475 RAB30Q15771 203 aa13.52□□□□□ -0.24
USP43-202ENST00000570475 P4HA3Q7Z4N8 544 aa13.52□□□□□ -0.24
USP43-202ENST00000570475 ST8SIA1Q92185 356 aa13.52□□□□□ -0.24
USP43-202ENST00000570475 BIN3Q9NQY0 253 aa13.52□□□□□ -0.24
USP43-202ENST00000570475 CYB5R1Q9UHQ9 305 aa13.52□□□□□ -0.24
USP43-202ENST00000570475 PUS1Q9Y606 427 aaKnown RBP eCLIP13.52□□□□□ -0.24
USP43-202ENST00000570475 ZNF814B7Z6K7 855 aa13.52□□□□□ -0.25
USP43-202ENST00000570475 RNASEK-C17orf49H0YIS7 233 aa13.52□□□□□ -0.25
USP43-202ENST00000570475 MBTPS2O43462 519 aa13.52□□□□□ -0.25
USP43-202ENST00000570475 ZFAND5O76080 213 aa13.52□□□□□ -0.25
USP43-202ENST00000570475 SLC25A4P12235 298 aa13.52□□□□□ -0.25
USP43-202ENST00000570475 TMEM50BP56557 158 aa13.52□□□□□ -0.25
USP43-202ENST00000570475 DTWD2Q8NBA8 298 aa13.52□□□□□ -0.25
USP43-202ENST00000570475 OR10S1Q8NGN2 331 aa13.52□□□□□ -0.25
USP43-202ENST00000570475 OR13G1Q8NGZ3 307 aa13.52□□□□□ -0.25
USP43-202ENST00000570475 MR1Q95460 341 aa13.52□□□□□ -0.25
USP43-202ENST00000570475 DKKL1Q9UK85 242 aa13.52□□□□□ -0.25
USP43-202ENST00000570475 ZNF175Q9Y473 711 aa13.52□□□□□ -0.25
USP43-202ENST00000570475 VPS13AQ96RL7 3174 aa13.52□□□□□ -0.25
USP43-202ENST00000570475 CFIP05156 583 aa13.52□□□□□ -0.25
USP43-202ENST00000570475 OR8U9P0C7N5 309 aa13.52□□□□□ -0.25
USP43-202ENST00000570475 ANOS1P23352 680 aa13.52□□□□□ -0.25
USP43-202ENST00000570475 ACY1Q03154 408 aa13.52□□□□□ -0.25
USP43-202ENST00000570475 PJVKQ0ZLH3 352 aa13.52□□□□□ -0.25
USP43-202ENST00000570475 NANPQ8TBE9 248 aa13.52□□□□□ -0.25
USP43-202ENST00000570475 SLC39A7Q92504 469 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms