RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 hCG_38984A0A1B0GV85 526 aa9.55□□□□□ -0.88
GTF3C1-209ENST00000568569 TMEM210A6NLX4 147 aa9.55□□□□□ -0.88
GTF3C1-209ENST00000568569 VGLL3A8MV65 326 aa9.55□□□□□ -0.88
GTF3C1-209ENST00000568569 ZNF878C9JN71 531 aa9.55□□□□□ -0.88
GTF3C1-209ENST00000568569 TBX1O43435 398 aa9.55□□□□□ -0.88
GTF3C1-209ENST00000568569 EDF1O60869 148 aaKnown RBP9.55□□□□□ -0.88
GTF3C1-209ENST00000568569 ACAA1P09110 424 aaPredicted RBP9.55□□□□□ -0.88
GTF3C1-209ENST00000568569 PF4V1P10720 104 aa9.55□□□□□ -0.88
GTF3C1-209ENST00000568569 CFL1P23528 166 aaKnown RBP9.55□□□□□ -0.88
GTF3C1-209ENST00000568569 PYCR1P32322 319 aa9.55□□□□□ -0.88
GTF3C1-209ENST00000568569 SLC35A2P78381 396 aa9.55□□□□□ -0.88
GTF3C1-209ENST00000568569 SPIBQ01892 262 aa9.55□□□□□ -0.88
GTF3C1-209ENST00000568569 LIPEQ05469 1076 aa9.55□□□□□ -0.88
GTF3C1-209ENST00000568569 CNN3Q15417 329 aaKnown RBP9.55□□□□□ -0.88
GTF3C1-209ENST00000568569 SNCBQ16143 134 aa9.55□□□□□ -0.88
GTF3C1-209ENST00000568569 CCBE1Q6UXH8 406 aaPredicted RBP9.55□□□□□ -0.88
GTF3C1-209ENST00000568569 SLC15A3Q8IY34 581 aa9.55□□□□□ -0.88
GTF3C1-209ENST00000568569 FAM185AQ8N0U4 392 aa9.55□□□□□ -0.88
GTF3C1-209ENST00000568569 CSNK2A3Q8NEV1 391 aa9.55□□□□□ -0.88
GTF3C1-209ENST00000568569 OR2T4Q8NH00 348 aa9.55□□□□□ -0.88
GTF3C1-209ENST00000568569 OR52J3Q8NH60 311 aa9.55□□□□□ -0.88
GTF3C1-209ENST00000568569 FAM162AQ96A26 154 aa9.55□□□□□ -0.88
GTF3C1-209ENST00000568569 SLAMF6Q96DU3 332 aa9.55□□□□□ -0.88
GTF3C1-209ENST00000568569 ATP6V1G3Q96LB4 118 aa9.55□□□□□ -0.88
GTF3C1-209ENST00000568569 DHRS1Q96LJ7 313 aa9.55□□□□□ -0.88
GTF3C1-209ENST00000568569 DDOQ99489 341 aa9.55□□□□□ -0.88
GTF3C1-209ENST00000568569 RTL8AQ9BWD3 113 aa9.55□□□□□ -0.88
GTF3C1-209ENST00000568569 HEXA-AS1Q9H8Q6 139 aa9.55□□□□□ -0.88
GTF3C1-209ENST00000568569 ELL3Q9HB65 397 aaPredicted RBP9.55□□□□□ -0.88
GTF3C1-209ENST00000568569 CENPMQ9NSP4 180 aa9.55□□□□□ -0.88
GTF3C1-209ENST00000568569 NLKQ9UBE8 527 aa9.55□□□□□ -0.88
GTF3C1-209ENST00000568569 TCF19Q9Y242 345 aa9.55□□□□□ -0.88
GTF3C1-209ENST00000568569 RHBDD3Q9Y3P4 386 aa9.55□□□□□ -0.88
GTF3C1-209ENST00000568569 COMMD3-BMI1R4GMX3 469 aa9.55□□□□□ -0.88
GTF3C1-209ENST00000568569 TVP23AA6NH52 213 aa9.54□□□□□ -0.88
GTF3C1-209ENST00000568569 OR2AT4A6NND4 320 aa9.54□□□□□ -0.88
GTF3C1-209ENST00000568569 AKR7A2O43488 359 aa9.54□□□□□ -0.88
GTF3C1-209ENST00000568569 GLCEO94923 617 aa9.54□□□□□ -0.88
GTF3C1-209ENST00000568569 DUS4LO95620 317 aaKnown RBP9.54□□□□□ -0.88
GTF3C1-209ENST00000568569 TFF1P04155 84 aa9.54□□□□□ -0.88
GTF3C1-209ENST00000568569 ANXA2P07355 339 aaKnown RBP9.54□□□□□ -0.88
GTF3C1-209ENST00000568569 SPARCP09486 303 aa9.54□□□□□ -0.88
GTF3C1-209ENST00000568569 PSKH1P11801 424 aa9.54□□□□□ -0.88
GTF3C1-209ENST00000568569 SLC15A1P46059 708 aa9.54□□□□□ -0.88
GTF3C1-209ENST00000568569 GABRA2P47869 451 aa9.54□□□□□ -0.88
GTF3C1-209ENST00000568569 CX3CR1P49238 355 aa9.54□□□□□ -0.88
GTF3C1-209ENST00000568569 LGALS4P56470 323 aa9.54□□□□□ -0.88
GTF3C1-209ENST00000568569 GRB2P62993 217 aaKnown RBP9.54□□□□□ -0.88
GTF3C1-209ENST00000568569 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.54□□□□□ -0.88
GTF3C1-209ENST00000568569 KRT72Q14CN4 511 aa9.54□□□□□ -0.88
GTF3C1-209ENST00000568569 SLC35F1Q5T1Q4 408 aa9.54□□□□□ -0.88
GTF3C1-209ENST00000568569 LYPD4Q6UWN0 246 aa9.54□□□□□ -0.88
GTF3C1-209ENST00000568569 MKXQ8IYA7 352 aa9.54□□□□□ -0.88
GTF3C1-209ENST00000568569 TMEM185AQ8NFB2 350 aa9.54□□□□□ -0.88
GTF3C1-209ENST00000568569 OR5K1Q8NHB7 308 aa9.54□□□□□ -0.88
GTF3C1-209ENST00000568569 RPL3LQ92901 407 aaKnown RBP9.54□□□□□ -0.88
GTF3C1-209ENST00000568569 RCC1LQ96I51 464 aaKnown RBP9.54□□□□□ -0.88
GTF3C1-209ENST00000568569 OR5M11Q96RB7 305 aa9.54□□□□□ -0.88
GTF3C1-209ENST00000568569 FUZQ9BT04 418 aa9.54□□□□□ -0.88
GTF3C1-209ENST00000568569 PRSS22Q9GZN4 317 aa9.54□□□□□ -0.88
GTF3C1-209ENST00000568569 PPP1R3EQ9H7J1 279 aa9.54□□□□□ -0.88
GTF3C1-209ENST00000568569 SP140LQ9H930 580 aa9.54□□□□□ -0.88
GTF3C1-209ENST00000568569 ABCB9Q9NP78 766 aa9.54□□□□□ -0.88
GTF3C1-209ENST00000568569 SAR1AQ9NR31 198 aa9.54□□□□□ -0.88
GTF3C1-209ENST00000568569 LRP12Q9Y561 859 aa9.54□□□□□ -0.88
GTF3C1-209ENST00000568569 A0A1W2PPH5 198 aa9.53□□□□□ -0.88
GTF3C1-209ENST00000568569 WI2-2373I1.2A0A1W2PRP0 233 aa9.53□□□□□ -0.88
GTF3C1-209ENST00000568569 A0A1W2PRX2 142 aa9.53□□□□□ -0.88
GTF3C1-209ENST00000568569 DIRAS1O95057 198 aa9.53□□□□□ -0.88
GTF3C1-209ENST00000568569 PF4P02776 101 aa9.53□□□□□ -0.88
GTF3C1-209ENST00000568569 ALDOBP05062 364 aa9.53□□□□□ -0.88
GTF3C1-209ENST00000568569 MSX2P35548 267 aaPredicted RBP9.53□□□□□ -0.88
GTF3C1-209ENST00000568569 GSK3AP49840 483 aa9.53□□□□□ -0.88
GTF3C1-209ENST00000568569 ENTPD1P49961 510 aa9.53□□□□□ -0.88
GTF3C1-209ENST00000568569 KLHL12Q53G59 568 aa9.53□□□□□ -0.88
GTF3C1-209ENST00000568569 ARSJQ5FYB0 599 aaPredicted RBP9.53□□□□□ -0.88
GTF3C1-209ENST00000568569 KCTD8Q6ZWB6 473 aa9.53□□□□□ -0.88
GTF3C1-209ENST00000568569 ZNRF1Q8ND25 227 aa9.53□□□□□ -0.88
GTF3C1-209ENST00000568569 OR52H1Q8NGJ2 320 aa9.53□□□□□ -0.88
GTF3C1-209ENST00000568569 RPS4Y2Q8TD47 263 aa9.53□□□□□ -0.88
GTF3C1-209ENST00000568569 SGK3Q96BR1 496 aa9.53□□□□□ -0.88
GTF3C1-209ENST00000568569 RCN3Q96D15 328 aa9.53□□□□□ -0.88
GTF3C1-209ENST00000568569 B9D2Q9BPU9 175 aa9.53□□□□□ -0.88
GTF3C1-209ENST00000568569 ABCB10Q9NRK6 738 aa9.53□□□□□ -0.88
GTF3C1-209ENST00000568569 CD300AQ9UGN4 299 aa9.53□□□□□ -0.88
GTF3C1-209ENST00000568569 PITPNC1Q9UKF7 332 aa9.53□□□□□ -0.88
GTF3C1-209ENST00000568569 MPC1Q9Y5U8 109 aa9.53□□□□□ -0.88
GTF3C1-209ENST00000568569 IGKV1D-17A0A075B6S4 117 aa9.52□□□□□ -0.89
GTF3C1-209ENST00000568569 hCG_1809904A0A1W2PP81 198 aa9.52□□□□□ -0.89
GTF3C1-209ENST00000568569 A0A1W2PPE2 198 aa9.52□□□□□ -0.89
GTF3C1-209ENST00000568569 A0A1W2PR64 198 aa9.52□□□□□ -0.89
GTF3C1-209ENST00000568569 A0A1W2PRV1 198 aa9.52□□□□□ -0.89
GTF3C1-209ENST00000568569 E9PQ18 207 aa9.52□□□□□ -0.89
GTF3C1-209ENST00000568569 NME4O00746 187 aa9.52□□□□□ -0.89
GTF3C1-209ENST00000568569 APOC1P02654 83 aa9.52□□□□□ -0.89
GTF3C1-209ENST00000568569 GLRA1P23415 457 aa9.52□□□□□ -0.89
GTF3C1-209ENST00000568569 COX7A1P24310 79 aa9.52□□□□□ -0.89
GTF3C1-209ENST00000568569 HSD11B1P28845 292 aa9.52□□□□□ -0.89
GTF3C1-209ENST00000568569 IFNGR2P38484 337 aa9.52□□□□□ -0.89
GTF3C1-209ENST00000568569 VDAC2P45880 294 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms