RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 PCDHGB5Q9Y5G0 923 aa10.82□□□□□ -0.68
TSC2-220ENST00000568238 R4GMQ9 66 aa10.82□□□□□ -0.68
TSC2-220ENST00000568238 CEACAM18A8MTB9 384 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 A8MXK9 166 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 F5H5P2 479 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 LOC110117498-PIK3R3F6TDL0 507 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 TRIM77I1YAP6 450 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 J3QLW9 94 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 SLC1A7O00341 560 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 MLNRO43193 412 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 SULT1C4O75897 302 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 SELEP16581 610 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 ZNF19P17023 458 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 MYL12AP19105 171 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 PSMB10P40306 273 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 ETV1P50549 477 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 OR12D2P58182 307 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 SEC61A1P61619 476 aaKnown RBP10.81□□□□□ -0.68
TSC2-220ENST00000568238 ACTA2P62736 377 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 ACTG2P63267 376 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 ZNF92Q03936 586 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 ST3GAL4Q11206 333 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 GALEQ14376 348 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 CDONQ4KMG0 1287 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 ESCO2Q56NI9 601 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 ARMCX4Q5H9R4 360 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 BCL2L15Q5TBC7 163 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 C12orf54Q6X4T0 127 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 PGAP1Q75T13 922 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 COMMD2Q86X83 199 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 STX19Q8N4C7 294 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 DEFB108BQ8NET1 73 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 OR52H1Q8NGJ2 320 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 ZNF420Q8TAQ5 688 aaPredicted RBP10.81□□□□□ -0.68
TSC2-220ENST00000568238 MRPL48Q96GC5 212 aaKnown RBP10.81□□□□□ -0.68
TSC2-220ENST00000568238 TMEM80Q96HE8 168 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 REEP6Q96HR9 211 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 C4orf36Q96KX1 117 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 PBOV1Q9GZY1 135 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 MMP26Q9NRE1 261 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 INPP5EQ9NRR6 644 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 PLCXD1Q9NUJ7 323 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 TMEM100Q9NV29 134 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 CNOT2Q9NZN8 540 aaKnown RBP10.81□□□□□ -0.68
TSC2-220ENST00000568238 ZNF319Q9P2F9 582 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 OR5V1Q9UGF6 321 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 DIMT1Q9UNQ2 313 aaKnown RBP10.81□□□□□ -0.68
TSC2-220ENST00000568238 LRCH1Q9Y2L9 728 aa10.81□□□□□ -0.68
TSC2-220ENST00000568238 POLR3KQ9Y2Y1 108 aaPredicted RBP10.81□□□□□ -0.68
TSC2-220ENST00000568238 IGHV3-64DA0A0J9YX35 117 aa10.8□□□□□ -0.68
TSC2-220ENST00000568238 A0A1B0GWJ7 208 aa10.8□□□□□ -0.68
TSC2-220ENST00000568238 LRRC30A6NM36 301 aa10.8□□□□□ -0.68
TSC2-220ENST00000568238 PTGES3LE9PB15 166 aa10.8□□□□□ -0.68
TSC2-220ENST00000568238 H0YL77 283 aa10.8□□□□□ -0.68
TSC2-220ENST00000568238 XRCC2O43543 280 aa10.8□□□□□ -0.68
TSC2-220ENST00000568238 SRSF10O75494 262 aaKnown RBP10.8□□□□□ -0.68
TSC2-220ENST00000568238 CYB5R3P00387 301 aaPredicted RBP10.8□□□□□ -0.68
TSC2-220ENST00000568238 LIMS3P0CW19 117 aa10.8□□□□□ -0.68
TSC2-220ENST00000568238 LIMS4P0CW20 117 aa10.8□□□□□ -0.68
TSC2-220ENST00000568238 PIPP12273 146 aaPredicted RBP10.8□□□□□ -0.68
TSC2-220ENST00000568238 RPS2P15880 293 aaKnown RBP10.8□□□□□ -0.68
TSC2-220ENST00000568238 ZNF12P17014 697 aa10.8□□□□□ -0.68
TSC2-220ENST00000568238 DCKP27707 260 aa10.8□□□□□ -0.68
TSC2-220ENST00000568238 DCTDP32321 178 aa10.8□□□□□ -0.68
TSC2-220ENST00000568238 ZNF154Q13106 437 aa10.8□□□□□ -0.68
TSC2-220ENST00000568238 MOGAT3Q86VF5 341 aa10.8□□□□□ -0.68
TSC2-220ENST00000568238 C1orf87Q8N0U7 546 aa10.8□□□□□ -0.68
TSC2-220ENST00000568238 FAM216AQ8WUB2 273 aa10.8□□□□□ -0.68
TSC2-220ENST00000568238 C22orf15Q8WYQ4 148 aa10.8□□□□□ -0.68
TSC2-220ENST00000568238 SGCDQ92629 289 aa10.8□□□□□ -0.68
TSC2-220ENST00000568238 PPP1R14AQ96A00 147 aa10.8□□□□□ -0.68
TSC2-220ENST00000568238 SGK3Q96BR1 496 aa10.8□□□□□ -0.68
TSC2-220ENST00000568238 JAM3Q9BX67 310 aa10.8□□□□□ -0.68
TSC2-220ENST00000568238 MOB1AQ9H8S9 216 aa10.8□□□□□ -0.68
TSC2-220ENST00000568238 ISG20L2Q9H9L3 353 aaKnown RBP10.8□□□□□ -0.68
TSC2-220ENST00000568238 SCN3BQ9NY72 215 aa10.8□□□□□ -0.68
TSC2-220ENST00000568238 OR52A1Q9UKL2 312 aa10.8□□□□□ -0.68
TSC2-220ENST00000568238 EXOSC1Q9Y3B2 195 aaKnown RBP10.8□□□□□ -0.68
TSC2-220ENST00000568238 GGT3PA6NGU5 568 aa10.79□□□□□ -0.68
TSC2-220ENST00000568238 TRAPPC2LH3BP13 241 aa10.79□□□□□ -0.68
TSC2-220ENST00000568238 ZNF205O95201 554 aa10.79□□□□□ -0.68
TSC2-220ENST00000568238 HLA-DPB1P04440 258 aa10.79□□□□□ -0.68
TSC2-220ENST00000568238 CPT2P23786 658 aa10.79□□□□□ -0.68
TSC2-220ENST00000568238 FPR2P25090 351 aa10.79□□□□□ -0.68
TSC2-220ENST00000568238 GATA4P43694 442 aa10.79□□□□□ -0.68
TSC2-220ENST00000568238 CSNK2BP67870 215 aa10.79□□□□□ -0.68
TSC2-220ENST00000568238 ODF4Q2M2E3 257 aa10.79□□□□□ -0.68
TSC2-220ENST00000568238 ZNF181Q2M3W8 571 aa10.79□□□□□ -0.68
TSC2-220ENST00000568238 OR51E1Q8TCB6 317 aa10.79□□□□□ -0.68
TSC2-220ENST00000568238 SPRYD4Q8WW59 207 aaPredicted RBP10.79□□□□□ -0.68
TSC2-220ENST00000568238 RORBQ92753 470 aa10.79□□□□□ -0.68
TSC2-220ENST00000568238 SPSB4Q96A44 273 aa10.79□□□□□ -0.68
TSC2-220ENST00000568238 PELI1Q96FA3 418 aa10.79□□□□□ -0.68
TSC2-220ENST00000568238 MYCBPQ99417 103 aaPredicted RBP10.79□□□□□ -0.68
TSC2-220ENST00000568238 ZNF649Q9BS31 505 aa10.79□□□□□ -0.68
TSC2-220ENST00000568238 MRI1Q9BV20 369 aa10.79□□□□□ -0.68
TSC2-220ENST00000568238 SSBP3Q9BWW4 388 aaPredicted RBP10.79□□□□□ -0.68
TSC2-220ENST00000568238 FKBP14Q9NWM8 211 aa10.79□□□□□ -0.68
TSC2-220ENST00000568238 PAK1IP1Q9NWT1 392 aaPredicted RBP10.79□□□□□ -0.68
TSC2-220ENST00000568238 CHCHD3Q9NX63 227 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms