RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 NRTNQ99748 197 aa2.43□□□□□ -2.02
HERPUD1-212ENST00000567944 EBNA1BP2Q99848 306 aaKnown RBP2.43□□□□□ -2.02
HERPUD1-212ENST00000567944 EBF4Q9BQW3 602 aa2.43□□□□□ -2.02
HERPUD1-212ENST00000567944 ZNF670Q9BS34 389 aa2.43□□□□□ -2.02
HERPUD1-212ENST00000567944 C2orf88Q9BSF0 95 aa2.43□□□□□ -2.02
HERPUD1-212ENST00000567944 ANGPTL4Q9BY76 406 aa2.43□□□□□ -2.02
HERPUD1-212ENST00000567944 BCL2L14Q9BZR8 327 aa2.43□□□□□ -2.02
HERPUD1-212ENST00000567944 TOLLIPQ9H0E2 274 aa2.43□□□□□ -2.02
HERPUD1-212ENST00000567944 DEFB129Q9H1M3 183 aa2.43□□□□□ -2.02
HERPUD1-212ENST00000567944 SPNS1Q9H2V7 528 aa2.43□□□□□ -2.02
HERPUD1-212ENST00000567944 TRABDQ9H4I3 376 aa2.43□□□□□ -2.02
HERPUD1-212ENST00000567944 NANOGQ9H9S0 305 aa2.43□□□□□ -2.02
HERPUD1-212ENST00000567944 POLE4Q9NR33 117 aa2.43□□□□□ -2.02
HERPUD1-212ENST00000567944 MMP26Q9NRE1 261 aa2.43□□□□□ -2.02
HERPUD1-212ENST00000567944 TREX1Q9NSU2 369 aa2.43□□□□□ -2.02
HERPUD1-212ENST00000567944 TREM2Q9NZC2 230 aa2.43□□□□□ -2.02
HERPUD1-212ENST00000567944 VAPAQ9P0L0 249 aa2.43□□□□□ -2.02
HERPUD1-212ENST00000567944 GNG12Q9UBI6 72 aa2.43□□□□□ -2.02
HERPUD1-212ENST00000567944 FLVCR2Q9UPI3 526 aa2.43□□□□□ -2.02
HERPUD1-212ENST00000567944 TP53TG5Q9Y2B4 290 aa2.43□□□□□ -2.02
HERPUD1-212ENST00000567944 ACOT9Q9Y305 439 aa2.43□□□□□ -2.02
HERPUD1-212ENST00000567944 RBMX2Q9Y388 322 aaKnown RBP2.43□□□□□ -2.02
HERPUD1-212ENST00000567944 NEUROG3Q9Y4Z2 214 aa2.43□□□□□ -2.02
HERPUD1-212ENST00000567944 SF3B1O75533 1304 aaKnown RBP eCLIP2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 MN1Q10571 1320 aaPredicted RBP2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 USP34Q70CQ2 3546 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 WDR87Q6ZQQ6 2873 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 NAV2Q8IVL1 2488 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 SMCO3A2RU48 225 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 GJE1A6NN92 205 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 LINC00587B1AMM8 73 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 G3V4G9 280 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 TSTD3H0UI37 97 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 GFYI3L273 518 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 DFFAO00273 331 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 SULT1C2O00338 296 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 N4BP1O75113 896 aaKnown RBP2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 TM7SF2O76062 418 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 IL1BP01584 269 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 GUSBP08236 651 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 CD3GP09693 182 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 CCNB1P14635 433 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 RPA2P15927 270 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 SPI1P17947 270 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 DCKP27707 260 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 GTF2E2P29084 291 aaKnown RBP2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 IL12BP29460 328 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 ERP29P30040 261 aaKnown RBP2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 CCR7P32248 378 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 UGT2B10P36537 528 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 TGFBR2P37173 567 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 HPCAL1P37235 193 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 KCNJ3P48549 501 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 SERPINB10P48595 397 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 IDH2P48735 452 aaKnown RBP2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 MRPL19P49406 292 aaKnown RBP2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 BIDP55957 195 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 RAB25P57735 213 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 TAS2R39P59534 338 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 DEFA1P59665 94 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 DEFA3P59666 94 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 RAB2AP61019 212 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 PSME3P61289 254 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 GNG11P61952 73 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 MRPS10P82664 201 aaKnown RBP2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 PITPNAQ00169 270 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 CSTF1Q05048 431 aaKnown RBP2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 TGM3Q08188 693 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 SLC10A7Q0GE19 358 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 SNTB2Q13425 540 aaKnown RBP2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 PDK4Q16654 411 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 BSXQ3C1V8 233 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 ZBED5Q49AG3 693 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 HIKESHIQ53FT3 197 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 RNASE10Q5GAN6 216 aaKnown RBP2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 BEX5Q5H9J7 111 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 KLF17Q5JT82 389 aaPredicted RBP2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 PHYHD1Q5SRE7 291 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 GPRC6AQ5T6X5 926 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 OR2G6Q5TZ20 316 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 RAET1LQ5VY80 246 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 TRIQKQ629K1 86 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 NCR3LG1Q68D85 454 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 FAM71F2Q6NXP2 309 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 TMIGD1Q6UXZ0 262 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 ACOT7LQ6ZUV0 252 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 NDUFAF7Q7L592 441 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 PID1Q7Z2X4 250 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 VRK2Q86Y07 508 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 RBM45Q8IUH3 476 aaKnown RBP2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 CENPLQ8N0S6 344 aaPredicted RBP2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 ATPAF2Q8N5M1 289 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 Q8N9L7 120 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 ZNF740Q8NDX6 193 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 FAM83FQ8NEG4 500 aaPredicted RBP2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 OR10A7Q8NGE5 316 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 OR9K2Q8NGE7 335 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 OR5T3Q8NGG3 340 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 OR5D18Q8NGL1 313 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 OR5H6Q8NGV6 325 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms