RNA–Protein interactions for RNA: ENST00000567710.5

NSMCE1-213, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 472 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-213ENST00000567710 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.04□□□□□ -0.961e-5■■■■□ 21.5
NSMCE1-213ENST00000567710 A0A1B0GVI7 797 aa9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 A6NLC8 198 aa9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 A8MV72 311 aaPredicted RBP9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 H0YJX3 145 aa9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 H3BSH0 61 aa9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 SYT7O43581 403 aa9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 ATP6V1G2O95670 118 aa9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 TGFAP01135 160 aa9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 HTR1AP08908 422 aa9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 THBS2P35442 1172 aa9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 MDH2P40926 338 aaKnown RBP9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 NANOS3P60323 173 aaKnown RBP9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 CSNK2BP67870 215 aa9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 HOXA4Q00056 320 aaPredicted RBP9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 ZNF154Q13106 437 aa9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 TMEM155Q4W5P6 130 aa9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 CEP78Q5JTW2 689 aa9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 ZBTB37Q5TC79 503 aa9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 LAIR2Q6ISS4 152 aa9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 FAM166AQ6J272 317 aa9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 ZNF826PQ6ZT77 177 aa9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 DOK3Q7L591 496 aa9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 LRRC28Q86X40 367 aaPredicted RBP9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 SYS1Q8N2H4 156 aa9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 SPICQ8N5J4 248 aa9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 OR14K1Q8NGZ2 314 aa9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 FBLIM1Q8WUP2 373 aa9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 RAB39BQ96DA2 213 aa9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 MICU1Q9BPX6 476 aa9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 RTL8AQ9BWD3 113 aa9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 JAM3Q9BX67 310 aa9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 FGF23Q9GZV9 251 aaPredicted RBP9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 ISG20L2Q9H9L3 353 aaKnown RBP9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 C1orf123Q9NWV4 160 aa9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 FRRS1LQ9P0K9 344 aa9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 RNF7Q9UBF6 113 aa9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 ENPP5Q9UJA9 477 aa9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 KCNS2Q9ULS6 477 aa9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 V9GYS6 101 aa9.03□□□□□ -0.96
NSMCE1-213ENST00000567710 C2CD3Q4AC94 2353 aa9.02□□□□□ -0.96
NSMCE1-213ENST00000567710 MALRD1Q5VYJ5 2156 aa9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 PPIAL4EA0A075B759 164 aa9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 LOC107986453A0A1B0GWG9 222 aa9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 hCG_1807616A0A1W2PRN6 198 aa9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 IRGMA1A4Y4 181 aa9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 TMEM210A6NLX4 147 aa9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 DHRS7CA6NNS2 312 aa9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 CEACAM18A8MTB9 384 aa9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 B4DSR2 109 aa9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 PPIAL4DF5H284 164 aa9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 LMX1BO60663 402 aa9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 FSTL3O95633 263 aa9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 UBCP0CG48 685 aaKnown RBP9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 LIMS3P0CW19 117 aa9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 LIMS4P0CW20 117 aa9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 PPIAL4FP0DN26 164 aa9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 DCKP27707 260 aa9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 RIPK1Q13546 671 aa9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 CEACAM21Q3KPI0 293 aa9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 DMRTC1Q5HYR2 192 aa9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 FDX2Q6P4F2 183 aa9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 KCTD8Q6ZWB6 473 aa9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 EGFL6Q8IUX8 553 aa9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 C11orf53Q8IXP5 236 aa9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 RDH10Q8IZV5 341 aa9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 MUC20Q8N307 709 aaPredicted RBP9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 KLHL36Q8N4N3 616 aa9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 GGHQ92820 318 aa9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 RNF170Q96K19 258 aa9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 HIST1H2AAQ96QV6 131 aa9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 TLNRD1Q9H1K6 362 aa9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 VCX3BQ9H321 246 aa9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 LPAR2Q9HBW0 351 aa9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 TMEM165Q9HC07 324 aa9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 PCDHB10Q9UN67 800 aa9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 DIMT1Q9UNQ2 313 aaKnown RBP9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 PPIAL4AQ9Y536 164 aa9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 NAV3Q8IVL0 2385 aa9.02□□□□□ -0.97
NSMCE1-213ENST00000567710 A6NIN4 97 aa9.01□□□□□ -0.97
NSMCE1-213ENST00000567710 F5H0A9 414 aaPredicted RBP9.01□□□□□ -0.97
NSMCE1-213ENST00000567710 CDIPTO14735 213 aa9.01□□□□□ -0.97
NSMCE1-213ENST00000567710 XPNPEP2O43895 674 aa9.01□□□□□ -0.97
NSMCE1-213ENST00000567710 NRASP01111 189 aa9.01□□□□□ -0.97
NSMCE1-213ENST00000567710 MSMBP08118 114 aa9.01□□□□□ -0.97
NSMCE1-213ENST00000567710 PIPP12273 146 aaPredicted RBP9.01□□□□□ -0.97
NSMCE1-213ENST00000567710 CD80P33681 288 aa9.01□□□□□ -0.97
NSMCE1-213ENST00000567710 ETV1P50549 477 aa9.01□□□□□ -0.97
NSMCE1-213ENST00000567710 GPM6AP51674 278 aa9.01□□□□□ -0.97
NSMCE1-213ENST00000567710 CCR9P51686 369 aa9.01□□□□□ -0.97
NSMCE1-213ENST00000567710 ALKBH1Q13686 389 aaKnown RBP9.01□□□□□ -0.97
NSMCE1-213ENST00000567710 ZNF404Q494X3 552 aa9.01□□□□□ -0.97
NSMCE1-213ENST00000567710 FAM76BQ5HYJ3 339 aa9.01□□□□□ -0.97
NSMCE1-213ENST00000567710 CLVS2Q5SYC1 327 aa9.01□□□□□ -0.97
NSMCE1-213ENST00000567710 TMEM244Q5VVB8 128 aa9.01□□□□□ -0.97
NSMCE1-213ENST00000567710 PLCXD3Q63HM9 321 aa9.01□□□□□ -0.97
NSMCE1-213ENST00000567710 TMEM42Q69YG0 159 aa9.01□□□□□ -0.97
NSMCE1-213ENST00000567710 WDR82Q6UXN9 313 aa9.01□□□□□ -0.97
NSMCE1-213ENST00000567710 IZUMO2Q6UXV1 221 aa9.01□□□□□ -0.97
NSMCE1-213ENST00000567710 MOB3CQ70IA8 216 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms