RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 POLR2IP36954 125 aaKnown RBP12.13□□□□□ -0.47
FANCA-220ENST00000566409 GNALP38405 381 aa12.13□□□□□ -0.47
FANCA-220ENST00000566409 WDR38Q5JTN6 314 aa12.13□□□□□ -0.47
FANCA-220ENST00000566409 DEGS2Q6QHC5 323 aa12.13□□□□□ -0.47
FANCA-220ENST00000566409 BRD3OSQ6XYD6 125 aa12.13□□□□□ -0.47
FANCA-220ENST00000566409 MEPCEQ7L2J0 689 aaKnown RBP12.13□□□□□ -0.47
FANCA-220ENST00000566409 TCEANCQ8N8B7 351 aa12.13□□□□□ -0.47
FANCA-220ENST00000566409 PIGCQ92535 297 aa12.13□□□□□ -0.47
FANCA-220ENST00000566409 RPL3LQ92901 407 aaKnown RBP12.13□□□□□ -0.47
FANCA-220ENST00000566409 OR8B4Q96RC9 309 aa12.13□□□□□ -0.47
FANCA-220ENST00000566409 TBX15Q96SF7 602 aa12.13□□□□□ -0.47
FANCA-220ENST00000566409 CCL13Q99616 98 aa12.13□□□□□ -0.47
FANCA-220ENST00000566409 PKP2Q99959 881 aa12.13□□□□□ -0.47
FANCA-220ENST00000566409 GABARAPL1Q9H0R8 117 aa12.13□□□□□ -0.47
FANCA-220ENST00000566409 WDR13Q9H1Z4 485 aa12.13□□□□□ -0.47
FANCA-220ENST00000566409 TRIM36Q9NQ86 728 aa12.13□□□□□ -0.47
FANCA-220ENST00000566409 MPC1Q9Y5U8 109 aa12.13□□□□□ -0.47
FANCA-220ENST00000566409 A0A0U1RQV5 110 aa12.12□□□□□ -0.47
FANCA-220ENST00000566409 TMEM269A0A1B0GVZ9 245 aa12.12□□□□□ -0.47
FANCA-220ENST00000566409 ACOD1A6NK06 481 aa12.12□□□□□ -0.47
FANCA-220ENST00000566409 ZNF879B4DU55 563 aa12.12□□□□□ -0.47
FANCA-220ENST00000566409 TMPRSS2O15393 492 aa12.12□□□□□ -0.47
FANCA-220ENST00000566409 SRSF10O75494 262 aaKnown RBP12.12□□□□□ -0.47
FANCA-220ENST00000566409 ATP5HO75947 161 aa12.12□□□□□ -0.47
FANCA-220ENST00000566409 MUC1P15941 1255 aaPredicted RBP12.12□□□□□ -0.47
FANCA-220ENST00000566409 FASP25445 335 aa12.12□□□□□ -0.47
FANCA-220ENST00000566409 DCTDP32321 178 aa12.12□□□□□ -0.47
FANCA-220ENST00000566409 RASSF2P50749 326 aa12.12□□□□□ -0.47
FANCA-220ENST00000566409 IL5RAQ01344 420 aa12.12□□□□□ -0.47
FANCA-220ENST00000566409 MFGE8Q08431 387 aaPredicted RBP12.12□□□□□ -0.47
FANCA-220ENST00000566409 BAMBIQ13145 260 aa12.12□□□□□ -0.47
FANCA-220ENST00000566409 SLC9A3R2Q15599 337 aa12.12□□□□□ -0.47
FANCA-220ENST00000566409 AWAT1Q58HT5 328 aa12.12□□□□□ -0.47
FANCA-220ENST00000566409 DMRTC1Q5HYR2 192 aa12.12□□□□□ -0.47
FANCA-220ENST00000566409 C1orf146Q5VVC0 180 aa12.12□□□□□ -0.47
FANCA-220ENST00000566409 CD276Q5ZPR3 534 aa12.12□□□□□ -0.47
FANCA-220ENST00000566409 KCTD18Q6PI47 426 aaPredicted RBP12.12□□□□□ -0.47
FANCA-220ENST00000566409 RBMS3Q6XE24 437 aaKnown RBP12.12□□□□□ -0.47
FANCA-220ENST00000566409 BTN2A1Q7KYR7 527 aa12.12□□□□□ -0.47
FANCA-220ENST00000566409 ZNF679Q8IYX0 411 aa12.12□□□□□ -0.47
FANCA-220ENST00000566409 SCCPDHQ8NBX0 429 aa12.12□□□□□ -0.47
FANCA-220ENST00000566409 TMEM163Q8TC26 289 aa12.12□□□□□ -0.47
FANCA-220ENST00000566409 TAF15Q92804 592 aaKnown RBP eCLIP12.12□□□□□ -0.47
FANCA-220ENST00000566409 RNF170Q96K19 258 aa12.12□□□□□ -0.47
FANCA-220ENST00000566409 IL4I1Q96RQ9 567 aa12.12□□□□□ -0.47
FANCA-220ENST00000566409 MICU1Q9BPX6 476 aa12.12□□□□□ -0.47
FANCA-220ENST00000566409 PCGF1Q9BSM1 259 aa12.12□□□□□ -0.47
FANCA-220ENST00000566409 MROQ9BYG7 248 aa12.12□□□□□ -0.47
FANCA-220ENST00000566409 PBOV1Q9GZY1 135 aa12.12□□□□□ -0.47
FANCA-220ENST00000566409 ADGRL4Q9HBW9 690 aa12.12□□□□□ -0.47
FANCA-220ENST00000566409 ZNF391Q9UJN7 358 aa12.12□□□□□ -0.47
FANCA-220ENST00000566409 CENPVL3A0A0U1RRI6 287 aa12.11□□□□□ -0.47
FANCA-220ENST00000566409 ANXA2P2A6NMY6 339 aa12.11□□□□□ -0.47
FANCA-220ENST00000566409 TFF1P04155 84 aa12.11□□□□□ -0.47
FANCA-220ENST00000566409 MICBQ29980 383 aa12.11□□□□□ -0.47
FANCA-220ENST00000566409 DEFB112Q30KQ8 113 aa12.11□□□□□ -0.47
FANCA-220ENST00000566409 LCN1P1Q5VSP4 162 aa12.11□□□□□ -0.47
FANCA-220ENST00000566409 NXNL2Q5VZ03 156 aa12.11□□□□□ -0.47
FANCA-220ENST00000566409 RUSC1-AS1Q66K80 236 aa12.11□□□□□ -0.47
FANCA-220ENST00000566409 ZDHHC13Q8IUH4 622 aa12.11□□□□□ -0.47
FANCA-220ENST00000566409 FTMTQ8N4E7 242 aa12.11□□□□□ -0.47
FANCA-220ENST00000566409 FAM216BQ8N7L0 139 aa12.11□□□□□ -0.47
FANCA-220ENST00000566409 OR5T2Q8NGG2 359 aa12.11□□□□□ -0.47
FANCA-220ENST00000566409 OR51E1Q8TCB6 317 aa12.11□□□□□ -0.47
FANCA-220ENST00000566409 WDFY2Q96P53 400 aa12.11□□□□□ -0.47
FANCA-220ENST00000566409 CNN2Q99439 309 aaKnown RBP12.11□□□□□ -0.47
FANCA-220ENST00000566409 CIB1Q99828 191 aa12.11□□□□□ -0.47
FANCA-220ENST00000566409 APOL4Q9BPW4 351 aa12.11□□□□□ -0.47
FANCA-220ENST00000566409 RTL8AQ9BWD3 113 aa12.11□□□□□ -0.47
FANCA-220ENST00000566409 SIRPDQ9H106 197 aa12.11□□□□□ -0.47
FANCA-220ENST00000566409 SEMA6AQ9H2E6 1030 aa12.11□□□□□ -0.47
FANCA-220ENST00000566409 PRDM13Q9H4Q3 707 aa12.11□□□□□ -0.47
FANCA-220ENST00000566409 GPR84Q9NQS5 396 aa12.11□□□□□ -0.47
FANCA-220ENST00000566409 RPUSD1Q9UJJ7 312 aaKnown RBP12.11□□□□□ -0.47
FANCA-220ENST00000566409 TMEM210A6NLX4 147 aa12.1□□□□□ -0.47
FANCA-220ENST00000566409 CLDN34H7C241 214 aa12.1□□□□□ -0.47
FANCA-220ENST00000566409 AKR7A2O43488 359 aa12.1□□□□□ -0.47
FANCA-220ENST00000566409 ZNF254O75437 659 aa12.1□□□□□ -0.47
FANCA-220ENST00000566409 RHBDL1O75783 438 aa12.1□□□□□ -0.47
FANCA-220ENST00000566409 TOX4O94842 621 aa12.1□□□□□ -0.47
FANCA-220ENST00000566409 LIPFP07098 398 aa12.1□□□□□ -0.47
FANCA-220ENST00000566409 RNASE1P07998 156 aaKnown RBP12.1□□□□□ -0.47
FANCA-220ENST00000566409 HKR1P10072 659 aa12.1□□□□□ -0.47
FANCA-220ENST00000566409 SELLP14151 372 aa12.1□□□□□ -0.47
FANCA-220ENST00000566409 TGM4P49221 684 aa12.1□□□□□ -0.47
FANCA-220ENST00000566409 GMFBP60983 142 aa12.1□□□□□ -0.47
FANCA-220ENST00000566409 CXCR4P61073 352 aa12.1□□□□□ -0.47
FANCA-220ENST00000566409 ARF6P62330 175 aa12.1□□□□□ -0.47
FANCA-220ENST00000566409 SNCBQ16143 134 aa12.1□□□□□ -0.47
FANCA-220ENST00000566409 ATPAF1Q5TC12 328 aaPredicted RBP12.1□□□□□ -0.47
FANCA-220ENST00000566409 STUMQ69YW2 141 aa12.1□□□□□ -0.47
FANCA-220ENST00000566409 ZNF322Q6U7Q0 402 aaPredicted RBP12.1□□□□□ -0.47
FANCA-220ENST00000566409 PLEKHG7Q6ZR37 379 aa12.1□□□□□ -0.47
FANCA-220ENST00000566409 ASRGL1Q7L266 308 aa12.1□□□□□ -0.47
FANCA-220ENST00000566409 ZDHHC23Q8IYP9 409 aa12.1□□□□□ -0.47
FANCA-220ENST00000566409 C3orf56Q8N813 242 aa12.1□□□□□ -0.47
FANCA-220ENST00000566409 LY6G5BQ8NDX9 201 aa12.1□□□□□ -0.47
FANCA-220ENST00000566409 OR10Z1Q8NGY1 313 aa12.1□□□□□ -0.47
FANCA-220ENST00000566409 ASB17Q8WXJ9 295 aa12.1□□□□□ -0.47
FANCA-220ENST00000566409 ST8SIA4Q92187 359 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms