RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 GATA4P43694 442 aa6.91□□□□□ -1.3
CDH13-208ENST00000566333 MAP2K3P46734 347 aa6.91□□□□□ -1.3
CDH13-208ENST00000566333 TNFAIP6P98066 277 aaPredicted RBP6.91□□□□□ -1.3
CDH13-208ENST00000566333 SLC3A1Q07837 685 aa6.91□□□□□ -1.3
CDH13-208ENST00000566333 RIPPLY1Q0D2K3 151 aa6.91□□□□□ -1.3
CDH13-208ENST00000566333 MLLT11Q13015 90 aaPredicted RBP6.91□□□□□ -1.3
CDH13-208ENST00000566333 PRDX4Q13162 271 aa6.91□□□□□ -1.3
CDH13-208ENST00000566333 MED22Q15528 200 aa6.91□□□□□ -1.3
CDH13-208ENST00000566333 TSTQ16762 297 aaKnown RBP6.91□□□□□ -1.3
CDH13-208ENST00000566333 DMRTC1Q5HYR2 192 aa6.91□□□□□ -1.3
CDH13-208ENST00000566333 Q5PR19 223 aa6.91□□□□□ -1.3
CDH13-208ENST00000566333 TMEM244Q5VVB8 128 aa6.91□□□□□ -1.3
CDH13-208ENST00000566333 UBE2UQ5VVX9 321 aa6.91□□□□□ -1.3
CDH13-208ENST00000566333 PRAMEF6Q5VXH4 476 aa6.91□□□□□ -1.3
CDH13-208ENST00000566333 ZNF676Q8N7Q3 588 aa6.91□□□□□ -1.3
CDH13-208ENST00000566333 OR13G1Q8NGZ3 307 aa6.91□□□□□ -1.3
CDH13-208ENST00000566333 ITLN1Q8WWA0 313 aa6.91□□□□□ -1.3
CDH13-208ENST00000566333 OR5P3Q8WZ94 311 aa6.91□□□□□ -1.3
CDH13-208ENST00000566333 GHSRQ92847 366 aa6.91□□□□□ -1.3
CDH13-208ENST00000566333 ITFG2Q969R8 447 aa6.91□□□□□ -1.3
CDH13-208ENST00000566333 TRMT61AQ96FX7 289 aaKnown RBP6.91□□□□□ -1.3
CDH13-208ENST00000566333 DIRC2Q96SL1 478 aa6.91□□□□□ -1.3
CDH13-208ENST00000566333 CHST5Q9GZS9 411 aa6.91□□□□□ -1.3
CDH13-208ENST00000566333 SLC22A4Q9H015 551 aa6.91□□□□□ -1.3
CDH13-208ENST00000566333 COMMD4Q9H0A8 199 aa6.91□□□□□ -1.3
CDH13-208ENST00000566333 RAB1BQ9H0U4 201 aa6.91□□□□□ -1.3
CDH13-208ENST00000566333 SAP30LQ9HAJ7 183 aa6.91□□□□□ -1.3
CDH13-208ENST00000566333 BARX1Q9HBU1 254 aaPredicted RBP6.91□□□□□ -1.3
CDH13-208ENST00000566333 TMEM100Q9NV29 134 aa6.91□□□□□ -1.3
CDH13-208ENST00000566333 DCAF16Q9NXF7 216 aa6.91□□□□□ -1.3
CDH13-208ENST00000566333 ENPP5Q9UJA9 477 aa6.91□□□□□ -1.3
CDH13-208ENST00000566333 EDARQ9UNE0 448 aa6.91□□□□□ -1.3
CDH13-208ENST00000566333 SONP18583 2426 aaKnown RBP6.9□□□□□ -1.3
CDH13-208ENST00000566333 A0A096LNT2 108 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 IGKV1-9A0A0C4DH69 117 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 IGHV3-64DA0A0J9YX35 117 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 ANKRD61A6NGH8 418 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 ZNF850A8MQ14 1090 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 LYNX1G3V0Z9 82 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 GMDSO60547 372 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 SC5DO75845 299 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 LYNX1P0DP58 116 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 DAOP14920 347 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 CPEP16870 476 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 ART1P52961 327 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 MRPS11P82912 194 aaKnown RBP6.9□□□□□ -1.3
CDH13-208ENST00000566333 HOXA4Q00056 320 aaPredicted RBP6.9□□□□□ -1.3
CDH13-208ENST00000566333 ZNF154Q13106 437 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 TPBGQ13641 420 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 INSL4Q14641 139 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 OR8G1Q15617 311 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 MPPED2Q15777 294 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 UBE2V2Q15819 145 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 SSX1Q16384 188 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 CEP78Q5JTW2 689 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 CLVS2Q5SYC1 327 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 LIPKQ5VXJ0 399 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 ZNF529Q6P280 563 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 CRIP3Q6Q6R5 217 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 ZDHHC23Q8IYP9 409 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 FTMTQ8N4E7 242 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 SVOPQ8N4V2 548 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 PARP16Q8N5Y8 322 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 CELF2-AS1Q8N7Q2 184 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 CCDC54Q8NEL0 328 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 WFDC11Q8NEX6 87 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 OR13C3Q8NGS6 347 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 GPR148Q8TDV2 347 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 NEU4Q8WWR8 484 aaPredicted RBP6.9□□□□□ -1.3
CDH13-208ENST00000566333 C10orf35Q96D05 121 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 OR14A2Q96R54 314 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 MGLLQ99685 303 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 TLNRD1Q9H1K6 362 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 PLEKHA1Q9HB21 404 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 GCM1Q9NP62 436 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 ISYNA1Q9NPH2 558 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 GPR173Q9NS66 373 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 ZNF275Q9NSD4 429 aaPredicted RBP6.9□□□□□ -1.3
CDH13-208ENST00000566333 IL19Q9UHD0 177 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 ZNF281Q9Y2X9 895 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 MPC1Q9Y5U8 109 aa6.9□□□□□ -1.3
CDH13-208ENST00000566333 ANK3Q12955 4377 aaKnown RBP6.9□□□□□ -1.31
CDH13-208ENST00000566333 ARHGAP32A7KAX9 2087 aa6.89□□□□□ -1.31
CDH13-208ENST00000566333 IGKV1-27A0A075B6S5 117 aa6.89□□□□□ -1.31
CDH13-208ENST00000566333 IGHV4-30-2A0A087WSY4 118 aa6.89□□□□□ -1.31
CDH13-208ENST00000566333 TRBV5-7A0A0A0MS05 114 aa6.89□□□□□ -1.31
CDH13-208ENST00000566333 IGHV1-69-2A0A0G2JMI3 117 aa6.89□□□□□ -1.31
CDH13-208ENST00000566333 PQLC2LA1A4F0 135 aa6.89□□□□□ -1.31
CDH13-208ENST00000566333 VWC2LB2RUY7 222 aa6.89□□□□□ -1.31
CDH13-208ENST00000566333 SSX4O60224 188 aa6.89□□□□□ -1.31
CDH13-208ENST00000566333 INMTO95050 263 aa6.89□□□□□ -1.31
CDH13-208ENST00000566333 NRASP01111 189 aa6.89□□□□□ -1.31
CDH13-208ENST00000566333 ERCC1P07992 297 aaPredicted RBP6.89□□□□□ -1.31
CDH13-208ENST00000566333 ZNF12P17014 697 aa6.89□□□□□ -1.31
CDH13-208ENST00000566333 FSTP19883 344 aa6.89□□□□□ -1.31
CDH13-208ENST00000566333 TNFSF4P23510 183 aa6.89□□□□□ -1.31
CDH13-208ENST00000566333 COL8A2P25067 703 aa6.89□□□□□ -1.31
CDH13-208ENST00000566333 GIFP27352 417 aa6.89□□□□□ -1.31
CDH13-208ENST00000566333 GNALP38405 381 aa6.89□□□□□ -1.31
CDH13-208ENST00000566333 PMELP40967 661 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms