RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 DCAF16Q9NXF7 216 aa17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 PIGLQ9Y2B2 252 aa17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 LRP5LA4QPB2 252 aa17.74■□□□□ 0.43
SHCBP1-205ENST00000566016 TMEM210A6NLX4 147 aa17.74■□□□□ 0.43
SHCBP1-205ENST00000566016 XPNPEP2O43895 674 aa17.74■□□□□ 0.43
SHCBP1-205ENST00000566016 IGHV2-70P01814 119 aa17.74■□□□□ 0.43
SHCBP1-205ENST00000566016 RPSAP08865 295 aaKnown RBP17.74■□□□□ 0.43
SHCBP1-205ENST00000566016 FAHP16930 419 aa17.74■□□□□ 0.43
SHCBP1-205ENST00000566016 TGM4P49221 684 aa17.74■□□□□ 0.43
SHCBP1-205ENST00000566016 GZMKP49863 264 aa17.74■□□□□ 0.43
SHCBP1-205ENST00000566016 ETV1P50549 477 aa17.74■□□□□ 0.43
SHCBP1-205ENST00000566016 BTG1P62324 171 aa17.74■□□□□ 0.43
SHCBP1-205ENST00000566016 ST3GAL4Q11206 333 aa17.74■□□□□ 0.43
SHCBP1-205ENST00000566016 MPPED2Q15777 294 aa17.74■□□□□ 0.43
SHCBP1-205ENST00000566016 TMEM244Q5VVB8 128 aa17.74■□□□□ 0.43
SHCBP1-205ENST00000566016 PRAMEF6Q5VXH4 476 aa17.74■□□□□ 0.43
SHCBP1-205ENST00000566016 TMPRSS11AQ6ZMR5 421 aa17.74■□□□□ 0.43
SHCBP1-205ENST00000566016 OR11L1Q8NGX0 322 aa17.74■□□□□ 0.43
SHCBP1-205ENST00000566016 CLDND2Q8NHS1 167 aa17.74■□□□□ 0.43
SHCBP1-205ENST00000566016 ZNF420Q8TAQ5 688 aaPredicted RBP17.74■□□□□ 0.43
SHCBP1-205ENST00000566016 HPSE2Q8WWQ2 592 aa17.74■□□□□ 0.43
SHCBP1-205ENST00000566016 C10orf35Q96D05 121 aa17.74■□□□□ 0.43
SHCBP1-205ENST00000566016 C1orf159Q96HA4 380 aa17.74■□□□□ 0.43
SHCBP1-205ENST00000566016 TLNRD1Q9H1K6 362 aa17.74■□□□□ 0.43
SHCBP1-205ENST00000566016 DOCK11Q5JSL3 2073 aa17.73■□□□□ 0.43
SHCBP1-205ENST00000566016 FN1P02751 2386 aaKnown RBP17.73■□□□□ 0.43
SHCBP1-205ENST00000566016 LOC107986453A0A1B0GWG9 222 aa17.73■□□□□ 0.43
SHCBP1-205ENST00000566016 ZNF850A8MQ14 1090 aa17.73■□□□□ 0.43
SHCBP1-205ENST00000566016 SYT7O43581 403 aa17.73■□□□□ 0.43
SHCBP1-205ENST00000566016 CD5LO43866 347 aa17.73■□□□□ 0.43
SHCBP1-205ENST00000566016 IGHV4-31P0DP07 118 aa17.73■□□□□ 0.43
SHCBP1-205ENST00000566016 IRF2P14316 349 aa17.73■□□□□ 0.43
SHCBP1-205ENST00000566016 PMELP40967 661 aa17.73■□□□□ 0.43
SHCBP1-205ENST00000566016 CDH15P55291 814 aa17.73■□□□□ 0.43
SHCBP1-205ENST00000566016 MVKQ03426 396 aa17.73■□□□□ 0.43
SHCBP1-205ENST00000566016 ZNF154Q13106 437 aa17.73■□□□□ 0.43
SHCBP1-205ENST00000566016 ALKBH1Q13686 389 aaKnown RBP17.73■□□□□ 0.43
SHCBP1-205ENST00000566016 TMEM155Q4W5P6 130 aa17.73■□□□□ 0.43
SHCBP1-205ENST00000566016 FAM76BQ5HYJ3 339 aa17.73■□□□□ 0.43
SHCBP1-205ENST00000566016 C6orf141Q5SZD1 244 aa17.73■□□□□ 0.43
SHCBP1-205ENST00000566016 AVPI1Q5T686 147 aa17.73■□□□□ 0.43
SHCBP1-205ENST00000566016 BPIFB6Q8NFQ5 453 aa17.73■□□□□ 0.43
SHCBP1-205ENST00000566016 OR52N1Q8NH53 320 aa17.73■□□□□ 0.43
SHCBP1-205ENST00000566016 PIGCQ92535 297 aa17.73■□□□□ 0.43
SHCBP1-205ENST00000566016 GSX1Q9H4S2 264 aaPredicted RBP17.73■□□□□ 0.43
SHCBP1-205ENST00000566016 PPP1R3EQ9H7J1 279 aa17.73■□□□□ 0.43
SHCBP1-205ENST00000566016 RAB26Q9ULW5 256 aa17.73■□□□□ 0.43
SHCBP1-205ENST00000566016 WNK2Q9Y3S1 2297 aa17.72■□□□□ 0.43
SHCBP1-205ENST00000566016 IGHV3-64DA0A0J9YX35 117 aa17.72■□□□□ 0.43
SHCBP1-205ENST00000566016 OR5B21A6NL26 309 aa17.72■□□□□ 0.43
SHCBP1-205ENST00000566016 OR4C45A6NMZ5 311 aa17.72■□□□□ 0.43
SHCBP1-205ENST00000566016 SLC1A7O00341 560 aa17.72■□□□□ 0.43
SHCBP1-205ENST00000566016 WNT9BO14905 357 aa17.72■□□□□ 0.43
SHCBP1-205ENST00000566016 GBX2P52951 348 aaPredicted RBP17.72■□□□□ 0.43
SHCBP1-205ENST00000566016 CEACAM21Q3KPI0 293 aa17.72■□□□□ 0.43
SHCBP1-205ENST00000566016 CCDC58Q4VC31 144 aa17.72■□□□□ 0.43
SHCBP1-205ENST00000566016 CLVS2Q5SYC1 327 aa17.72■□□□□ 0.43
SHCBP1-205ENST00000566016 WDR86Q86TI4 376 aa17.72■□□□□ 0.43
SHCBP1-205ENST00000566016 KLHL36Q8N4N3 616 aa17.72■□□□□ 0.43
SHCBP1-205ENST00000566016 OR1M1Q8NGA1 313 aa17.72■□□□□ 0.43
SHCBP1-205ENST00000566016 HIST1H2AAQ96QV6 131 aa17.72■□□□□ 0.43
SHCBP1-205ENST00000566016 PLEKHA1Q9HB21 404 aa17.72■□□□□ 0.43
SHCBP1-205ENST00000566016 UFSP2Q9NUQ7 469 aa17.72■□□□□ 0.43
SHCBP1-205ENST00000566016 CHCHD3Q9NX63 227 aaKnown RBP17.72■□□□□ 0.43
SHCBP1-205ENST00000566016 TMEM212A6NML5 194 aa17.71■□□□□ 0.43
SHCBP1-205ENST00000566016 CCDC159P0C7I6 412 aa17.71■□□□□ 0.43
SHCBP1-205ENST00000566016 CFHR2P36980 270 aa17.71■□□□□ 0.43
SHCBP1-205ENST00000566016 MDH2P40926 338 aaKnown RBP17.71■□□□□ 0.43
SHCBP1-205ENST00000566016 LMO4P61968 165 aa17.71■□□□□ 0.43
SHCBP1-205ENST00000566016 ODF4Q2M2E3 257 aa17.71■□□□□ 0.43
SHCBP1-205ENST00000566016 AHSA2Q719I0 299 aa17.71■□□□□ 0.43
SHCBP1-205ENST00000566016 LRRC28Q86X40 367 aaPredicted RBP17.71■□□□□ 0.43
SHCBP1-205ENST00000566016 MUC20Q8N307 709 aaPredicted RBP17.71■□□□□ 0.43
SHCBP1-205ENST00000566016 SPICQ8N5J4 248 aa17.71■□□□□ 0.43
SHCBP1-205ENST00000566016 OR5A2Q8NGI9 324 aa17.71■□□□□ 0.43
SHCBP1-205ENST00000566016 RPS4Y2Q8TD47 263 aa17.71■□□□□ 0.43
SHCBP1-205ENST00000566016 RAB39BQ96DA2 213 aa17.71■□□□□ 0.43
SHCBP1-205ENST00000566016 RNF7Q9UBF6 113 aa17.71■□□□□ 0.43
SHCBP1-205ENST00000566016 NF1P21359 2839 aa17.7■□□□□ 0.42
SHCBP1-205ENST00000566016 CYB5R3P00387 301 aaPredicted RBP17.7■□□□□ 0.42
SHCBP1-205ENST00000566016 NRASP01111 189 aa17.7■□□□□ 0.42
SHCBP1-205ENST00000566016 GRPP07492 148 aa17.7■□□□□ 0.42
SHCBP1-205ENST00000566016 IL2RGP31785 369 aa17.7■□□□□ 0.42
SHCBP1-205ENST00000566016 GNG3P63215 75 aa17.7■□□□□ 0.42
SHCBP1-205ENST00000566016 ZMYND11Q15326 602 aa17.7■□□□□ 0.42
SHCBP1-205ENST00000566016 CYB5R2Q6BCY4 276 aa17.7■□□□□ 0.42
SHCBP1-205ENST00000566016 ZNF485Q8NCK3 441 aa17.7■□□□□ 0.42
SHCBP1-205ENST00000566016 TECTBQ96PL2 329 aa17.7■□□□□ 0.42
SHCBP1-205ENST00000566016 ZNF184Q99676 751 aaPredicted RBP17.7■□□□□ 0.42
SHCBP1-205ENST00000566016 GAL3ST1Q99999 423 aa17.7■□□□□ 0.42
SHCBP1-205ENST00000566016 NARFLQ9H6Q4 476 aa17.7■□□□□ 0.42
SHCBP1-205ENST00000566016 HHLA2Q9UM44 414 aa17.7■□□□□ 0.42
SHCBP1-205ENST00000566016 ISPDA4D126 451 aa17.69■□□□□ 0.42
SHCBP1-205ENST00000566016 A6NLC8 198 aa17.69■□□□□ 0.42
SHCBP1-205ENST00000566016 E9PI62 339 aa17.69■□□□□ 0.42
SHCBP1-205ENST00000566016 IGHV2-5P01817 119 aa17.69■□□□□ 0.42
SHCBP1-205ENST00000566016 CPT2P23786 658 aa17.69■□□□□ 0.42
SHCBP1-205ENST00000566016 THBS2P35442 1172 aa17.69■□□□□ 0.42
SHCBP1-205ENST00000566016 HNRNPA0Q13151 305 aaKnown RBP17.69■□□□□ 0.42
SHCBP1-205ENST00000566016 OR2G6Q5TZ20 316 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms