RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 ZNF835Q9Y2P0 537 aa13.47□□□□□ -0.25
COMMD4-210ENST00000564587 RTTNQ86VV8 2226 aa13.47□□□□□ -0.25
COMMD4-210ENST00000564587 GCN1Q92616 2671 aaKnown RBP13.47□□□□□ -0.25
COMMD4-210ENST00000564587 FLNBO75369 2602 aaKnown RBP13.46□□□□□ -0.25
COMMD4-210ENST00000564587 hCG_2014768A0A024R1R8 64 aa13.46□□□□□ -0.25
COMMD4-210ENST00000564587 TMEM8BA6NDV4 472 aa13.46□□□□□ -0.25
COMMD4-210ENST00000564587 NAP1L6A6NFF2 107 aa13.46□□□□□ -0.25
COMMD4-210ENST00000564587 MSTNO14793 375 aa13.46□□□□□ -0.25
COMMD4-210ENST00000564587 PFDN1O60925 122 aa13.46□□□□□ -0.25
COMMD4-210ENST00000564587 TOXO94900 526 aa13.46□□□□□ -0.25
COMMD4-210ENST00000564587 CST4P01036 141 aa13.46□□□□□ -0.25
COMMD4-210ENST00000564587 GLI4P10075 376 aa13.46□□□□□ -0.25
COMMD4-210ENST00000564587 NAT2P11245 290 aa13.46□□□□□ -0.25
COMMD4-210ENST00000564587 PTGFRP43088 359 aa13.46□□□□□ -0.25
COMMD4-210ENST00000564587 RBP2P50120 134 aa13.46□□□□□ -0.25
COMMD4-210ENST00000564587 EFNB2P52799 333 aa13.46□□□□□ -0.25
COMMD4-210ENST00000564587 ATP1B3P54709 279 aa13.46□□□□□ -0.25
COMMD4-210ENST00000564587 QRFPP83859 136 aa13.46□□□□□ -0.25
COMMD4-210ENST00000564587 DGCR2P98153 550 aa13.46□□□□□ -0.25
COMMD4-210ENST00000564587 PMPCAQ10713 525 aa13.46□□□□□ -0.25
COMMD4-210ENST00000564587 KLRB1Q12918 225 aa13.46□□□□□ -0.25
COMMD4-210ENST00000564587 GK2Q14410 553 aaPredicted RBP13.46□□□□□ -0.25
COMMD4-210ENST00000564587 GPR176Q14439 515 aa13.46□□□□□ -0.25
COMMD4-210ENST00000564587 DNM1P46Q6ZS02 220 aa13.46□□□□□ -0.25
COMMD4-210ENST00000564587 BHLHA15Q7RTS1 189 aaPredicted RBP13.46□□□□□ -0.25
COMMD4-210ENST00000564587 NRARPQ7Z6K4 114 aa13.46□□□□□ -0.25
COMMD4-210ENST00000564587 IZUMO1Q8IYV9 350 aa13.46□□□□□ -0.25
COMMD4-210ENST00000564587 DUSP18Q8NEJ0 188 aa13.46□□□□□ -0.25
COMMD4-210ENST00000564587 SNRNP40Q96DI7 357 aaKnown RBP13.46□□□□□ -0.25
COMMD4-210ENST00000564587 BORCS8Q96FH0 119 aa13.46□□□□□ -0.25
COMMD4-210ENST00000564587 GPR173Q9NS66 373 aa13.46□□□□□ -0.25
COMMD4-210ENST00000564587 RBMX2Q9Y388 322 aaKnown RBP13.46□□□□□ -0.25
COMMD4-210ENST00000564587 DSPP15924 2871 aaKnown RBP13.46□□□□□ -0.26
COMMD4-210ENST00000564587 PTPRQQ9UMZ3 2332 aa13.45□□□□□ -0.26
COMMD4-210ENST00000564587 TRAV18A0A075B6X5 111 aa13.45□□□□□ -0.26
COMMD4-210ENST00000564587 LINC00854A0A1B0GVQ3 168 aa13.45□□□□□ -0.26
COMMD4-210ENST00000564587 FAM240BA0A1B0GVZ2 78 aa13.45□□□□□ -0.26
COMMD4-210ENST00000564587 ZNF780AO75290 641 aaPredicted RBP13.45□□□□□ -0.26
COMMD4-210ENST00000564587 RBBP9O75884 186 aa13.45□□□□□ -0.26
COMMD4-210ENST00000564587 IGKV3-15P01624 115 aa13.45□□□□□ -0.26
COMMD4-210ENST00000564587 CD3GP09693 182 aa13.45□□□□□ -0.26
COMMD4-210ENST00000564587 VSIG8P0DPA2 414 aa13.45□□□□□ -0.26
COMMD4-210ENST00000564587 PRSS3P35030 304 aa13.45□□□□□ -0.26
COMMD4-210ENST00000564587 RFX2P48378 723 aa13.45□□□□□ -0.26
COMMD4-210ENST00000564587 BCAP31P51572 246 aa13.45□□□□□ -0.26
COMMD4-210ENST00000564587 MTCP1P56278 107 aa13.45□□□□□ -0.26
COMMD4-210ENST00000564587 TNK1Q13470 666 aa13.45□□□□□ -0.26
COMMD4-210ENST00000564587 ARL6IP1Q15041 203 aa13.45□□□□□ -0.26
COMMD4-210ENST00000564587 C3orf36Q3SXR2 165 aa13.45□□□□□ -0.26
COMMD4-210ENST00000564587 CXorf67Q86X51 503 aaPredicted RBP13.45□□□□□ -0.26
COMMD4-210ENST00000564587 DOLPP1Q86YN1 238 aa13.45□□□□□ -0.26
COMMD4-210ENST00000564587 STEAP2Q8NFT2 490 aa13.45□□□□□ -0.26
COMMD4-210ENST00000564587 TNFAIP8L1Q8WVP5 186 aa13.45□□□□□ -0.26
COMMD4-210ENST00000564587 ZCCHC14Q8WYQ9 949 aaKnown RBP13.45□□□□□ -0.26
COMMD4-210ENST00000564587 OPN3Q9H1Y3 402 aaPredicted RBP13.45□□□□□ -0.26
COMMD4-210ENST00000564587 COPZ2Q9P299 210 aa13.45□□□□□ -0.26
COMMD4-210ENST00000564587 STARD10Q9Y365 291 aa13.45□□□□□ -0.26
COMMD4-210ENST00000564587 CACNG2Q9Y698 323 aa13.45□□□□□ -0.26
COMMD4-210ENST00000564587 SVILO95425 2214 aa13.44□□□□□ -0.26
COMMD4-210ENST00000564587 FUOMA2VDF0 154 aa13.44□□□□□ -0.26
COMMD4-210ENST00000564587 OR5H1A6NKK0 313 aa13.44□□□□□ -0.26
COMMD4-210ENST00000564587 ORC5O43913 435 aa13.44□□□□□ -0.26
COMMD4-210ENST00000564587 SELEP16581 610 aa13.44□□□□□ -0.26
COMMD4-210ENST00000564587 IL32P24001 234 aa13.44□□□□□ -0.26
COMMD4-210ENST00000564587 GDNFP39905 211 aa13.44□□□□□ -0.26
COMMD4-210ENST00000564587 OR3A4PP47883 348 aa13.44□□□□□ -0.26
COMMD4-210ENST00000564587 IDH3GP51553 393 aaPredicted RBP13.44□□□□□ -0.26
COMMD4-210ENST00000564587 TMEM211Q6ICI0 200 aa13.44□□□□□ -0.26
COMMD4-210ENST00000564587 PLET1Q6UQ28 207 aa13.44□□□□□ -0.26
COMMD4-210ENST00000564587 MOB3CQ70IA8 216 aa13.44□□□□□ -0.26
COMMD4-210ENST00000564587 SSX8Q7RTT4 187 aa13.44□□□□□ -0.26
COMMD4-210ENST00000564587 PAQR4Q8N4S7 273 aaPredicted RBP13.44□□□□□ -0.26
COMMD4-210ENST00000564587 WDR31Q8NA23 367 aa13.44□□□□□ -0.26
COMMD4-210ENST00000564587 OR52I2Q8NH67 350 aa13.44□□□□□ -0.26
COMMD4-210ENST00000564587 UBASH3BQ8TF42 649 aa13.44□□□□□ -0.26
COMMD4-210ENST00000564587 PIGCQ92535 297 aa13.44□□□□□ -0.26
COMMD4-210ENST00000564587 POM121Q96HA1 1249 aa13.44□□□□□ -0.26
COMMD4-210ENST00000564587 HIST1H2AAQ96QV6 131 aa13.44□□□□□ -0.26
COMMD4-210ENST00000564587 TMEM59Q9BXS4 323 aa13.44□□□□□ -0.26
COMMD4-210ENST00000564587 AUNIPQ9H7T9 357 aa13.44□□□□□ -0.26
COMMD4-210ENST00000564587 PTTG3PQ9NZH4 202 aa13.44□□□□□ -0.26
COMMD4-210ENST00000564587 ZNF629Q9UEG4 869 aaPredicted RBP13.44□□□□□ -0.26
COMMD4-210ENST00000564587 ZNF107Q9UII5 783 aaPredicted RBP13.44□□□□□ -0.26
COMMD4-210ENST00000564587 NOP16Q9Y3C1 178 aaKnown RBP13.44□□□□□ -0.26
COMMD4-210ENST00000564587 INTS1Q8N201 2190 aaKnown RBP13.44□□□□□ -0.26
COMMD4-210ENST00000564587 AKAP13Q12802 2813 aa13.43□□□□□ -0.26
COMMD4-210ENST00000564587 H7C417 338 aa13.43□□□□□ -0.26
COMMD4-210ENST00000564587 LANCL1O43813 399 aa13.43□□□□□ -0.26
COMMD4-210ENST00000564587 IGF2RP11717 2491 aa13.43□□□□□ -0.26
COMMD4-210ENST00000564587 CCL2P13500 99 aa13.43□□□□□ -0.26
COMMD4-210ENST00000564587 PSMB1P20618 241 aaKnown RBP13.43□□□□□ -0.26
COMMD4-210ENST00000564587 FAUP35544 74 aaKnown RBP13.43□□□□□ -0.26
COMMD4-210ENST00000564587 WNT5AP41221 380 aa13.43□□□□□ -0.26
COMMD4-210ENST00000564587 ACTBP60709 375 aa13.43□□□□□ -0.26
COMMD4-210ENST00000564587 ACTG1P63261 375 aa13.43□□□□□ -0.26
COMMD4-210ENST00000564587 PLA2G7Q13093 441 aa13.43□□□□□ -0.26
COMMD4-210ENST00000564587 UNC119Q13432 240 aa13.43□□□□□ -0.26
COMMD4-210ENST00000564587 KLF9Q13886 244 aaPredicted RBP13.43□□□□□ -0.26
COMMD4-210ENST00000564587 TIMM23BQ5SRD1 257 aa13.43□□□□□ -0.26
COMMD4-210ENST00000564587 PLCXD3Q63HM9 321 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms