RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 SLC25A19Q9HC21 320 aa12.4□□□□□ -0.42
SPG7-210ENST00000564409 BRD7Q9NPI1 651 aa12.4□□□□□ -0.42
SPG7-210ENST00000564409 HAO2Q9NYQ3 351 aa12.4□□□□□ -0.42
SPG7-210ENST00000564409 ZNF319Q9P2F9 582 aa12.4□□□□□ -0.42
SPG7-210ENST00000564409 CAB39Q9Y376 341 aaPredicted RBP12.4□□□□□ -0.42
SPG7-210ENST00000564409 SOX21Q9Y651 276 aaPredicted RBP12.4□□□□□ -0.42
SPG7-210ENST00000564409 A0A0U1RQV5 110 aa12.39□□□□□ -0.43
SPG7-210ENST00000564409 MDFIC2A0A1B0GVS7 189 aa12.39□□□□□ -0.43
SPG7-210ENST00000564409 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.39□□□□□ -0.43
SPG7-210ENST00000564409 CDIPTO14735 213 aa12.39□□□□□ -0.43
SPG7-210ENST00000564409 GYG2O15488 501 aa12.39□□□□□ -0.43
SPG7-210ENST00000564409 NDUFB3O43676 98 aa12.39□□□□□ -0.43
SPG7-210ENST00000564409 MELTFP08582 738 aa12.39□□□□□ -0.43
SPG7-210ENST00000564409 ATP6V1B1P15313 513 aa12.39□□□□□ -0.43
SPG7-210ENST00000564409 ALOX5APP20292 161 aa12.39□□□□□ -0.43
SPG7-210ENST00000564409 DCTDP32321 178 aa12.39□□□□□ -0.43
SPG7-210ENST00000564409 MAP2K3P46734 347 aa12.39□□□□□ -0.43
SPG7-210ENST00000564409 ARF6P62330 175 aa12.39□□□□□ -0.43
SPG7-210ENST00000564409 CSNK2BP67870 215 aa12.39□□□□□ -0.43
SPG7-210ENST00000564409 HOXA4Q00056 320 aaPredicted RBP12.39□□□□□ -0.43
SPG7-210ENST00000564409 PRDX4Q13162 271 aa12.39□□□□□ -0.43
SPG7-210ENST00000564409 FLOT2Q14254 428 aa12.39□□□□□ -0.43
SPG7-210ENST00000564409 GFOD2Q3B7J2 385 aa12.39□□□□□ -0.43
SPG7-210ENST00000564409 WDR38Q5JTN6 314 aa12.39□□□□□ -0.43
SPG7-210ENST00000564409 C1orf122Q6ZSJ8 110 aa12.39□□□□□ -0.43
SPG7-210ENST00000564409 KRT77Q7Z794 578 aa12.39□□□□□ -0.43
SPG7-210ENST00000564409 TMEM179BQ7Z7N9 219 aa12.39□□□□□ -0.43
SPG7-210ENST00000564409 C8orf46Q8TAG6 207 aa12.39□□□□□ -0.43
SPG7-210ENST00000564409 DYRK2Q92630 601 aa12.39□□□□□ -0.43
SPG7-210ENST00000564409 HIST1H2AAQ96QV6 131 aa12.39□□□□□ -0.43
SPG7-210ENST00000564409 PKP2Q99959 881 aa12.39□□□□□ -0.43
SPG7-210ENST00000564409 LAMP5Q9UJQ1 280 aa12.39□□□□□ -0.43
SPG7-210ENST00000564409 TMEM14AQ9Y6G1 99 aa12.39□□□□□ -0.43
SPG7-210ENST00000564409 IGHV3OR15-7A0A075B7D8 119 aa12.38□□□□□ -0.43
SPG7-210ENST00000564409 NKX6-3A6NJ46 265 aa12.38□□□□□ -0.43
SPG7-210ENST00000564409 SELENOFO60613 162 aa12.38□□□□□ -0.43
SPG7-210ENST00000564409 ZNF254O75437 659 aa12.38□□□□□ -0.43
SPG7-210ENST00000564409 MDKP21741 143 aaPredicted RBP12.38□□□□□ -0.43
SPG7-210ENST00000564409 SLC2A5P22732 501 aa12.38□□□□□ -0.43
SPG7-210ENST00000564409 RAG2P55895 527 aa12.38□□□□□ -0.43
SPG7-210ENST00000564409 GUCA2AQ02747 115 aa12.38□□□□□ -0.43
SPG7-210ENST00000564409 ZBTB37Q5TC79 503 aa12.38□□□□□ -0.43
SPG7-210ENST00000564409 LCN1P1Q5VSP4 162 aa12.38□□□□□ -0.43
SPG7-210ENST00000564409 RUSC1-AS1Q66K80 236 aa12.38□□□□□ -0.43
SPG7-210ENST00000564409 STUMQ69YW2 141 aa12.38□□□□□ -0.43
SPG7-210ENST00000564409 FIP1L1Q6UN15 594 aaKnown RBP12.38□□□□□ -0.43
SPG7-210ENST00000564409 TRPM8Q7Z2W7 1104 aa12.38□□□□□ -0.43
SPG7-210ENST00000564409 LDLRAD3Q86YD5 345 aa12.38□□□□□ -0.43
SPG7-210ENST00000564409 ZDHHC23Q8IYP9 409 aa12.38□□□□□ -0.43
SPG7-210ENST00000564409 SCCPDHQ8NBX0 429 aa12.38□□□□□ -0.43
SPG7-210ENST00000564409 ASB17Q8WXJ9 295 aa12.38□□□□□ -0.43
SPG7-210ENST00000564409 LHX4Q969G2 390 aa12.38□□□□□ -0.43
SPG7-210ENST00000564409 RNF170Q96K19 258 aa12.38□□□□□ -0.43
SPG7-210ENST00000564409 RAB3IPQ96QF0 476 aaPredicted RBP12.38□□□□□ -0.43
SPG7-210ENST00000564409 CCL13Q99616 98 aa12.38□□□□□ -0.43
SPG7-210ENST00000564409 PRRG3Q9BZD7 231 aa12.38□□□□□ -0.43
SPG7-210ENST00000564409 CHIAQ9BZP6 476 aa12.38□□□□□ -0.43
SPG7-210ENST00000564409 DPAGT1Q9H3H5 408 aa12.38□□□□□ -0.43
SPG7-210ENST00000564409 DNAJB11Q9UBS4 358 aa12.38□□□□□ -0.43
SPG7-210ENST00000564409 ZNF816-ZNF321PA0A0X1KG74 233 aa12.37□□□□□ -0.43
SPG7-210ENST00000564409 TCRBV3S1A0A5B6 114 aa12.37□□□□□ -0.43
SPG7-210ENST00000564409 ZNF850A8MQ14 1090 aa12.37□□□□□ -0.43
SPG7-210ENST00000564409 FKBP6O75344 327 aa12.37□□□□□ -0.43
SPG7-210ENST00000564409 FCN3O75636 299 aa12.37□□□□□ -0.43
SPG7-210ENST00000564409 KNG1P01042 644 aa12.37□□□□□ -0.43
SPG7-210ENST00000564409 ACKR3P25106 362 aa12.37□□□□□ -0.43
SPG7-210ENST00000564409 RPS7P62081 194 aaKnown RBP12.37□□□□□ -0.43
SPG7-210ENST00000564409 CBX1P83916 185 aa12.37□□□□□ -0.43
SPG7-210ENST00000564409 POU4F2Q12837 409 aa12.37□□□□□ -0.43
SPG7-210ENST00000564409 OCLNQ16625 522 aa12.37□□□□□ -0.43
SPG7-210ENST00000564409 SPATA24Q86W54 205 aa12.37□□□□□ -0.43
SPG7-210ENST00000564409 OR8B12Q8NGG6 310 aa12.37□□□□□ -0.43
SPG7-210ENST00000564409 FAM81AQ8TBF8 368 aa12.37□□□□□ -0.43
SPG7-210ENST00000564409 LRTOMTQ8WZ04 291 aa12.37□□□□□ -0.43
SPG7-210ENST00000564409 PIGCQ92535 297 aa12.37□□□□□ -0.43
SPG7-210ENST00000564409 DCTN5Q9BTE1 182 aa12.37□□□□□ -0.43
SPG7-210ENST00000564409 MROQ9BYG7 248 aa12.37□□□□□ -0.43
SPG7-210ENST00000564409 FAM96BQ9Y3D0 163 aa12.37□□□□□ -0.43
SPG7-210ENST00000564409 LRP12Q9Y561 859 aa12.37□□□□□ -0.43
SPG7-210ENST00000564409 TMEM269A0A1B0GVZ9 245 aa12.36□□□□□ -0.43
SPG7-210ENST00000564409 PRKACGP22612 351 aa12.36□□□□□ -0.43
SPG7-210ENST00000564409 EEF1B2P24534 225 aaKnown RBP12.36□□□□□ -0.43
SPG7-210ENST00000564409 IER3P46695 156 aa12.36□□□□□ -0.43
SPG7-210ENST00000564409 CAV3P56539 151 aa12.36□□□□□ -0.43
SPG7-210ENST00000564409 ACTR3P61158 418 aa12.36□□□□□ -0.43
SPG7-210ENST00000564409 ESRRGP62508 458 aa12.36□□□□□ -0.43
SPG7-210ENST00000564409 GNG3P63215 75 aa12.36□□□□□ -0.43
SPG7-210ENST00000564409 ROM1Q03395 351 aa12.36□□□□□ -0.43
SPG7-210ENST00000564409 APOFQ13790 326 aa12.36□□□□□ -0.43
SPG7-210ENST00000564409 SNAPC1Q16533 368 aa12.36□□□□□ -0.43
SPG7-210ENST00000564409 CEACAM21Q3KPI0 293 aa12.36□□□□□ -0.43
SPG7-210ENST00000564409 TREML4Q6UXN2 200 aa12.36□□□□□ -0.43
SPG7-210ENST00000564409 ZNF788Q6ZQV5 615 aa12.36□□□□□ -0.43
SPG7-210ENST00000564409 C17orf107Q6ZR85 190 aa12.36□□□□□ -0.43
SPG7-210ENST00000564409 KCTD8Q6ZWB6 473 aa12.36□□□□□ -0.43
SPG7-210ENST00000564409 VMO1Q7Z5L0 202 aa12.36□□□□□ -0.43
SPG7-210ENST00000564409 FAM216BQ8N7L0 139 aa12.36□□□□□ -0.43
SPG7-210ENST00000564409 OR5A2Q8NGI9 324 aa12.36□□□□□ -0.43
SPG7-210ENST00000564409 ZNF671Q8TAW3 534 aa12.36□□□□□ -0.43
SPG7-210ENST00000564409 LYZL4Q96KX0 146 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms