RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 RPS19BP1Q86WX3 136 aaKnown RBP17.54■□□□□ 0.4
MSLN-205ENST00000563941 ARMC10Q8N2F6 343 aa17.54■□□□□ 0.4
MSLN-205ENST00000563941 OR2Y1Q8NGV0 311 aa17.54■□□□□ 0.4
MSLN-205ENST00000563941 HPF1Q9NWY4 346 aa17.54■□□□□ 0.4
MSLN-205ENST00000563941 DUX4Q9UBX2 424 aa17.54■□□□□ 0.4
MSLN-205ENST00000563941 COL6A3P12111 3177 aa17.54■□□□□ 0.4
MSLN-205ENST00000563941 NSG1A0A0A6YYJ2 146 aa17.54■□□□□ 0.4
MSLN-205ENST00000563941 A0A0J9YW62 118 aa17.54■□□□□ 0.4
MSLN-205ENST00000563941 FOXI3A8MTJ6 420 aaPredicted RBP17.54■□□□□ 0.4
MSLN-205ENST00000563941 CRHP06850 196 aa17.54■□□□□ 0.4
MSLN-205ENST00000563941 OTX1P32242 354 aaPredicted RBP17.54■□□□□ 0.4
MSLN-205ENST00000563941 WDR5BQ86VZ2 330 aa17.54■□□□□ 0.4
MSLN-205ENST00000563941 MAML2Q8IZL2 1156 aaPredicted RBP17.54■□□□□ 0.4
MSLN-205ENST00000563941 INO80EQ8NBZ0 244 aaPredicted RBP17.54■□□□□ 0.4
MSLN-205ENST00000563941 TMEM185AQ8NFB2 350 aa17.54■□□□□ 0.4
MSLN-205ENST00000563941 PP6455Q8WZ26 134 aa17.54■□□□□ 0.4
MSLN-205ENST00000563941 IER2Q9BTL4 223 aa17.54■□□□□ 0.4
MSLN-205ENST00000563941 ST6GALNAC5Q9BVH7 336 aa17.54■□□□□ 0.4
MSLN-205ENST00000563941 ULBP2Q9BZM5 246 aa17.54■□□□□ 0.4
MSLN-205ENST00000563941 CHST5Q9GZS9 411 aa17.54■□□□□ 0.4
MSLN-205ENST00000563941 SHARPINQ9H0F6 387 aa17.54■□□□□ 0.4
MSLN-205ENST00000563941 CHMP1AQ9HD42 196 aaPredicted RBP17.54■□□□□ 0.4
MSLN-205ENST00000563941 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.54■□□□□ 0.4
MSLN-205ENST00000563941 FOXD3Q9UJU5 478 aaPredicted RBP17.54■□□□□ 0.4
MSLN-205ENST00000563941 PIGLQ9Y2B2 252 aa17.54■□□□□ 0.4
MSLN-205ENST00000563941 CFAP54Q96N23 3096 aa17.54■□□□□ 0.4
MSLN-205ENST00000563941 M0R135 149 aa17.53■□□□□ 0.4
MSLN-205ENST00000563941 MASP2O00187 686 aa17.53■□□□□ 0.4
MSLN-205ENST00000563941 FCGR2AP12318 317 aa17.53■□□□□ 0.4
MSLN-205ENST00000563941 SERPINA2P20848 420 aa17.53■□□□□ 0.4
MSLN-205ENST00000563941 MLF1P58340 268 aa17.53■□□□□ 0.4
MSLN-205ENST00000563941 TRA2AQ13595 282 aaKnown RBP eCLIP17.53■□□□□ 0.4
MSLN-205ENST00000563941 ZIC4Q8N9L1 334 aa17.53■□□□□ 0.4
MSLN-205ENST00000563941 PHYHIPLQ96FC7 376 aa17.53■□□□□ 0.4
MSLN-205ENST00000563941 ZNF799Q96GE5 643 aa17.53■□□□□ 0.4
MSLN-205ENST00000563941 PLEK2Q9NYT0 353 aa17.53■□□□□ 0.4
MSLN-205ENST00000563941 PATE3B3GLJ2 98 aa17.53■□□□□ 0.4
MSLN-205ENST00000563941 DBHP09172 617 aa17.53■□□□□ 0.4
MSLN-205ENST00000563941 FPR2P25090 351 aa17.53■□□□□ 0.4
MSLN-205ENST00000563941 PSMB6P28072 239 aa17.53■□□□□ 0.4
MSLN-205ENST00000563941 BLVRBP30043 206 aaPredicted RBP17.53■□□□□ 0.4
MSLN-205ENST00000563941 ZNF84P51523 738 aa17.53■□□□□ 0.4
MSLN-205ENST00000563941 RAC1P63000 192 aa17.53■□□□□ 0.4
MSLN-205ENST00000563941 MC2RQ01718 297 aa17.53■□□□□ 0.4
MSLN-205ENST00000563941 ZFP36L1Q07352 338 aaKnown RBP17.53■□□□□ 0.4
MSLN-205ENST00000563941 MOB3CQ70IA8 216 aa17.53■□□□□ 0.4
MSLN-205ENST00000563941 OR13G1Q8NGZ3 307 aa17.53■□□□□ 0.4
MSLN-205ENST00000563941 GUCD1Q96NT3 240 aa17.53■□□□□ 0.4
MSLN-205ENST00000563941 SRXN1Q9BYN0 137 aa17.53■□□□□ 0.4
MSLN-205ENST00000563941 CBR3O75828 277 aa17.52■□□□□ 0.4
MSLN-205ENST00000563941 SFT2D2O95562 160 aa17.52■□□□□ 0.4
MSLN-205ENST00000563941 HPNP05981 417 aa17.52■□□□□ 0.4
MSLN-205ENST00000563941 PI3P19957 117 aa17.52■□□□□ 0.4
MSLN-205ENST00000563941 OR3A2P47893 321 aa17.52■□□□□ 0.4
MSLN-205ENST00000563941 SUCLG1P53597 346 aaKnown RBP17.52■□□□□ 0.4
MSLN-205ENST00000563941 SNU13P55769 128 aaKnown RBP17.52■□□□□ 0.4
MSLN-205ENST00000563941 SLC9A3R2Q15599 337 aa17.52■□□□□ 0.4
MSLN-205ENST00000563941 ZNF468Q5VIY5 522 aaPredicted RBP17.52■□□□□ 0.4
MSLN-205ENST00000563941 Q6ZSR3 168 aa17.52■□□□□ 0.4
MSLN-205ENST00000563941 PEG10Q86TG7 708 aaKnown RBP17.52■□□□□ 0.4
MSLN-205ENST00000563941 UBALD2Q8IYN6 164 aa17.52■□□□□ 0.4
MSLN-205ENST00000563941 STPG2Q8N412 459 aa17.52■□□□□ 0.4
MSLN-205ENST00000563941 PIGTQ969N2 578 aa17.52■□□□□ 0.4
MSLN-205ENST00000563941 ZNF837Q96EG3 531 aaPredicted RBP17.52■□□□□ 0.4
MSLN-205ENST00000563941 MRPS24Q96EL2 167 aaKnown RBP17.52■□□□□ 0.4
MSLN-205ENST00000563941 PIGQQ9BRB3 760 aa17.52■□□□□ 0.4
MSLN-205ENST00000563941 PECRQ9BY49 303 aa17.52■□□□□ 0.4
MSLN-205ENST00000563941 NMES1Q9C002 83 aa17.52■□□□□ 0.4
MSLN-205ENST00000563941 BARX1Q9HBU1 254 aaPredicted RBP17.52■□□□□ 0.4
MSLN-205ENST00000563941 CSAG2Q9Y5P2 127 aa17.52■□□□□ 0.4
MSLN-205ENST00000563941 F5H0A9 414 aaPredicted RBP17.51■□□□□ 0.39
MSLN-205ENST00000563941 KCNAB3O43448 404 aa17.51■□□□□ 0.39
MSLN-205ENST00000563941 FOLR3P41439 243 aa17.51■□□□□ 0.39
MSLN-205ENST00000563941 RSPO4Q2I0M5 234 aaPredicted RBP17.51■□□□□ 0.39
MSLN-205ENST00000563941 CLEC18BQ6UXF7 455 aa17.51■□□□□ 0.39
MSLN-205ENST00000563941 LHFPL1Q86WI0 220 aa17.51■□□□□ 0.39
MSLN-205ENST00000563941 TMEM17Q86X19 198 aa17.51■□□□□ 0.39
MSLN-205ENST00000563941 C20orf196Q8IYI0 205 aa17.51■□□□□ 0.39
MSLN-205ENST00000563941 CSNK2A3Q8NEV1 391 aa17.51■□□□□ 0.39
MSLN-205ENST00000563941 MAFIPQ8WZ33 124 aa17.51■□□□□ 0.39
MSLN-205ENST00000563941 HAS2Q92819 552 aa17.51■□□□□ 0.39
MSLN-205ENST00000563941 SPTSSAQ969W0 71 aa17.51■□□□□ 0.39
MSLN-205ENST00000563941 INTS12Q96CB8 462 aaKnown RBP17.51■□□□□ 0.39
MSLN-205ENST00000563941 FBXO17Q96EF6 278 aa17.51■□□□□ 0.39
MSLN-205ENST00000563941 SCGB3A2Q96PL1 93 aa17.51■□□□□ 0.39
MSLN-205ENST00000563941 S100A13Q99584 98 aa17.51■□□□□ 0.39
MSLN-205ENST00000563941 ARPC5LQ9BPX5 153 aa17.51■□□□□ 0.39
MSLN-205ENST00000563941 MS4A7Q9GZW8 240 aaPredicted RBP17.51■□□□□ 0.39
MSLN-205ENST00000563941 PRDM6Q9NQX0 595 aa17.51■□□□□ 0.39
MSLN-205ENST00000563941 FLVCR1Q9Y5Y0 555 aa17.51■□□□□ 0.39
MSLN-205ENST00000563941 MYO7BQ6PIF6 2116 aa17.51■□□□□ 0.39
MSLN-205ENST00000563941 MTRF1O75570 445 aaKnown RBP17.51■□□□□ 0.39
MSLN-205ENST00000563941 HTR3BO95264 441 aa17.51■□□□□ 0.39
MSLN-205ENST00000563941 APOC1P02654 83 aa17.51■□□□□ 0.39
MSLN-205ENST00000563941 HOXD11P31277 338 aaPredicted RBP17.51■□□□□ 0.39
MSLN-205ENST00000563941 TAS2R46P59540 309 aa17.51■□□□□ 0.39
MSLN-205ENST00000563941 TAGLNQ01995 201 aaKnown RBP17.51■□□□□ 0.39
MSLN-205ENST00000563941 PXDC1Q5TGL8 231 aa17.51■□□□□ 0.39
MSLN-205ENST00000563941 SLC16A14Q7RTX9 510 aa17.51■□□□□ 0.39
MSLN-205ENST00000563941 RTBDNQ9BSG5 229 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms