RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 TRRAPQ9Y4A5 3859 aa14.19□□□□□ -0.14
VPS9D1-203ENST00000563798 A0A1B0GVI7 797 aa14.19□□□□□ -0.14
VPS9D1-203ENST00000563798 ACOD1A6NK06 481 aa14.19□□□□□ -0.14
VPS9D1-203ENST00000563798 SELENOFO60613 162 aa14.19□□□□□ -0.14
VPS9D1-203ENST00000563798 ANXA8P13928 327 aa14.19□□□□□ -0.14
VPS9D1-203ENST00000563798 ALOX5APP20292 161 aa14.19□□□□□ -0.14
VPS9D1-203ENST00000563798 POU1F1P28069 291 aa14.19□□□□□ -0.14
VPS9D1-203ENST00000563798 PSMA6P60900 246 aaKnown RBP14.19□□□□□ -0.14
VPS9D1-203ENST00000563798 OCLNQ16625 522 aa14.19□□□□□ -0.14
VPS9D1-203ENST00000563798 STUMQ69YW2 141 aa14.19□□□□□ -0.14
VPS9D1-203ENST00000563798 FIP1L1Q6UN15 594 aaKnown RBP14.19□□□□□ -0.14
VPS9D1-203ENST00000563798 CPOQ8IVL8 374 aa14.19□□□□□ -0.14
VPS9D1-203ENST00000563798 TBC1D15Q8TC07 691 aa14.19□□□□□ -0.14
VPS9D1-203ENST00000563798 THEM6Q8WUY1 208 aa14.19□□□□□ -0.14
VPS9D1-203ENST00000563798 ST8SIA4Q92187 359 aa14.19□□□□□ -0.14
VPS9D1-203ENST00000563798 LHX4Q969G2 390 aa14.19□□□□□ -0.14
VPS9D1-203ENST00000563798 LYZL4Q96KX0 146 aa14.19□□□□□ -0.14
VPS9D1-203ENST00000563798 THTPAQ9BU02 230 aa14.19□□□□□ -0.14
VPS9D1-203ENST00000563798 BEX1Q9HBH7 125 aa14.19□□□□□ -0.14
VPS9D1-203ENST00000563798 SLC25A19Q9HC21 320 aa14.19□□□□□ -0.14
VPS9D1-203ENST00000563798 HAO2Q9NYQ3 351 aa14.19□□□□□ -0.14
VPS9D1-203ENST00000563798 A0A1B0GW55 424 aa14.18□□□□□ -0.14
VPS9D1-203ENST00000563798 GNGT2O14610 69 aa14.18□□□□□ -0.14
VPS9D1-203ENST00000563798 CRYBA1P05813 215 aa14.18□□□□□ -0.14
VPS9D1-203ENST00000563798 DUX4L2P0CJ85 424 aa14.18□□□□□ -0.14
VPS9D1-203ENST00000563798 DUX4L3P0CJ86 424 aa14.18□□□□□ -0.14
VPS9D1-203ENST00000563798 DUX4L4P0CJ87 422 aa14.18□□□□□ -0.14
VPS9D1-203ENST00000563798 DUX4L5P0CJ88 424 aa14.18□□□□□ -0.14
VPS9D1-203ENST00000563798 DUX4L6P0CJ89 424 aa14.18□□□□□ -0.14
VPS9D1-203ENST00000563798 DUX4L7P0CJ90 424 aa14.18□□□□□ -0.14
VPS9D1-203ENST00000563798 DCTDP32321 178 aa14.18□□□□□ -0.14
VPS9D1-203ENST00000563798 RAG2P55895 527 aa14.18□□□□□ -0.14
VPS9D1-203ENST00000563798 ELF3P78545 371 aaPredicted RBP14.18□□□□□ -0.14
VPS9D1-203ENST00000563798 RELBQ01201 579 aa14.18□□□□□ -0.14
VPS9D1-203ENST00000563798 PRDX4Q13162 271 aa14.18□□□□□ -0.14
VPS9D1-203ENST00000563798 GFOD2Q3B7J2 385 aa14.18□□□□□ -0.14
VPS9D1-203ENST00000563798 DEGS2Q6QHC5 323 aa14.18□□□□□ -0.14
VPS9D1-203ENST00000563798 DUX4L9Q6RFH8 374 aaPredicted RBP14.18□□□□□ -0.14
VPS9D1-203ENST00000563798 ZNF788Q6ZQV5 615 aa14.18□□□□□ -0.14
VPS9D1-203ENST00000563798 PAPD5Q8NDF8 572 aaKnown RBP14.18□□□□□ -0.14
VPS9D1-203ENST00000563798 NPRL2Q8WTW4 380 aa14.18□□□□□ -0.14
VPS9D1-203ENST00000563798 WFDC12Q8WWY7 111 aa14.18□□□□□ -0.14
VPS9D1-203ENST00000563798 DYRK2Q92630 601 aa14.18□□□□□ -0.14
VPS9D1-203ENST00000563798 SEH1LQ96EE3 360 aa14.18□□□□□ -0.14
VPS9D1-203ENST00000563798 RAB3IPQ96QF0 476 aaPredicted RBP14.18□□□□□ -0.14
VPS9D1-203ENST00000563798 DCTN5Q9BTE1 182 aa14.18□□□□□ -0.14
VPS9D1-203ENST00000563798 FGF23Q9GZV9 251 aaPredicted RBP14.18□□□□□ -0.14
VPS9D1-203ENST00000563798 YY1AP1Q9H869 796 aa14.18□□□□□ -0.14
VPS9D1-203ENST00000563798 ZNF556Q9HAH1 456 aa14.18□□□□□ -0.14
VPS9D1-203ENST00000563798 BRD7Q9NPI1 651 aa14.18□□□□□ -0.14
VPS9D1-203ENST00000563798 DUX4Q9UBX2 424 aa14.18□□□□□ -0.14
VPS9D1-203ENST00000563798 KLHDC2Q9Y2U9 406 aa14.18□□□□□ -0.14
VPS9D1-203ENST00000563798 A0A0U1RQV5 110 aa14.17□□□□□ -0.14
VPS9D1-203ENST00000563798 ZNF850A8MQ14 1090 aa14.17□□□□□ -0.14
VPS9D1-203ENST00000563798 NDUFB3O43676 98 aa14.17□□□□□ -0.14
VPS9D1-203ENST00000563798 OMGP23515 440 aa14.17□□□□□ -0.14
VPS9D1-203ENST00000563798 IER3P46695 156 aa14.17□□□□□ -0.14
VPS9D1-203ENST00000563798 TREML4Q6UXN2 200 aa14.17□□□□□ -0.14
VPS9D1-203ENST00000563798 C1orf122Q6ZSJ8 110 aa14.17□□□□□ -0.14
VPS9D1-203ENST00000563798 VMO1Q7Z5L0 202 aa14.17□□□□□ -0.14
VPS9D1-203ENST00000563798 HS3ST5Q8IZT8 346 aa14.17□□□□□ -0.14
VPS9D1-203ENST00000563798 FGFRL1Q8N441 504 aa14.17□□□□□ -0.14
VPS9D1-203ENST00000563798 PIP4P2Q8N4L2 257 aa14.17□□□□□ -0.14
VPS9D1-203ENST00000563798 FAM216BQ8N7L0 139 aa14.17□□□□□ -0.14
VPS9D1-203ENST00000563798 SCCPDHQ8NBX0 429 aa14.17□□□□□ -0.14
VPS9D1-203ENST00000563798 OR8B12Q8NGG6 310 aa14.17□□□□□ -0.14
VPS9D1-203ENST00000563798 HPSE2Q8WWQ2 592 aa14.17□□□□□ -0.14
VPS9D1-203ENST00000563798 DNAJC9Q8WXX5 260 aa14.17□□□□□ -0.14
VPS9D1-203ENST00000563798 NRBF2Q96F24 287 aa14.17□□□□□ -0.14
VPS9D1-203ENST00000563798 PKP2Q99959 881 aa14.17□□□□□ -0.14
VPS9D1-203ENST00000563798 YIPF3Q9GZM5 350 aa14.17□□□□□ -0.14
VPS9D1-203ENST00000563798 DNAJB9Q9UBS3 223 aa14.17□□□□□ -0.14
VPS9D1-203ENST00000563798 LRP12Q9Y561 859 aa14.17□□□□□ -0.14
VPS9D1-203ENST00000563798 A0A0U1RQK1 487 aa14.16□□□□□ -0.14
VPS9D1-203ENST00000563798 TCRBV3S1A0A5B6 114 aa14.16□□□□□ -0.14
VPS9D1-203ENST00000563798 CLPSL1A2RUU4 121 aa14.16□□□□□ -0.14
VPS9D1-203ENST00000563798 E2F6O75461 281 aa14.16□□□□□ -0.14
VPS9D1-203ENST00000563798 KNG1P01042 644 aa14.16□□□□□ -0.14
VPS9D1-203ENST00000563798 ATP6V1B1P15313 513 aa14.16□□□□□ -0.14
VPS9D1-203ENST00000563798 PRKACGP22612 351 aa14.16□□□□□ -0.14
VPS9D1-203ENST00000563798 ROM1Q03395 351 aa14.16□□□□□ -0.14
VPS9D1-203ENST00000563798 DNAL1Q4LDG9 190 aa14.16□□□□□ -0.14
VPS9D1-203ENST00000563798 LRRC10Q5BKY1 277 aa14.16□□□□□ -0.14
VPS9D1-203ENST00000563798 OLFML2AQ68BL7 652 aa14.16□□□□□ -0.14
VPS9D1-203ENST00000563798 CMTM4Q8IZR5 234 aa14.16□□□□□ -0.14
VPS9D1-203ENST00000563798 BBS1Q8NFJ9 593 aa14.16□□□□□ -0.14
VPS9D1-203ENST00000563798 ANGPTL6Q8NI99 470 aa14.16□□□□□ -0.14
VPS9D1-203ENST00000563798 RPL3LQ92901 407 aaKnown RBP14.16□□□□□ -0.14
VPS9D1-203ENST00000563798 MED30Q96HR3 178 aa14.16□□□□□ -0.14
VPS9D1-203ENST00000563798 RNF170Q96K19 258 aa14.16□□□□□ -0.14
VPS9D1-203ENST00000563798 TEX12Q9BXU0 123 aa14.16□□□□□ -0.14
VPS9D1-203ENST00000563798 WDR13Q9H1Z4 485 aa14.16□□□□□ -0.14
VPS9D1-203ENST00000563798 FAM206AQ9NX38 181 aa14.16□□□□□ -0.14
VPS9D1-203ENST00000563798 FKBP6O75344 327 aa14.15□□□□□ -0.14
VPS9D1-203ENST00000563798 IGLV3-1P01715 115 aa14.15□□□□□ -0.14
VPS9D1-203ENST00000563798 MAP2K3P46734 347 aa14.15□□□□□ -0.14
VPS9D1-203ENST00000563798 GUCA2AQ02747 115 aa14.15□□□□□ -0.14
VPS9D1-203ENST00000563798 FLOT2Q14254 428 aa14.15□□□□□ -0.14
VPS9D1-203ENST00000563798 KCTD18Q6PI47 426 aaPredicted RBP14.15□□□□□ -0.14
VPS9D1-203ENST00000563798 TRPM8Q7Z2W7 1104 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms