RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 SECTM1Q8WVN6 248 aa10.48□□□□□ -0.73
ABCA3-203ENST00000563623 LIN37Q96GY3 246 aaPredicted RBP10.48□□□□□ -0.73
ABCA3-203ENST00000563623 C2orf50Q96LR7 162 aa10.48□□□□□ -0.73
ABCA3-203ENST00000563623 LPAR5Q9H1C0 372 aa10.48□□□□□ -0.73
ABCA3-203ENST00000563623 CHST11Q9NPF2 352 aa10.48□□□□□ -0.73
ABCA3-203ENST00000563623 SCGNO76038 276 aa10.47□□□□□ -0.73
ABCA3-203ENST00000563623 NDUFB7P17568 137 aa10.47□□□□□ -0.73
ABCA3-203ENST00000563623 MRPS21P82921 87 aaKnown RBP10.47□□□□□ -0.73
ABCA3-203ENST00000563623 TGIF1Q15583 401 aa10.47□□□□□ -0.73
ABCA3-203ENST00000563623 FAM69BQ5VUD6 431 aa10.47□□□□□ -0.73
ABCA3-203ENST00000563623 OR2A2Q6IF42 318 aa10.47□□□□□ -0.73
ABCA3-203ENST00000563623 PGAP1Q75T13 922 aa10.47□□□□□ -0.73
ABCA3-203ENST00000563623 PIGTQ969N2 578 aa10.47□□□□□ -0.73
ABCA3-203ENST00000563623 OR10A2Q9H208 303 aa10.47□□□□□ -0.73
ABCA3-203ENST00000563623 SLC2A8Q9NY64 477 aa10.47□□□□□ -0.73
ABCA3-203ENST00000563623 MYO7BQ6PIF6 2116 aa10.47□□□□□ -0.73
ABCA3-203ENST00000563623 ABCA7Q8IZY2 2146 aa10.47□□□□□ -0.73
ABCA3-203ENST00000563623 TSPAN2O60636 221 aa10.47□□□□□ -0.73
ABCA3-203ENST00000563623 FCGR2CP31995 323 aa10.47□□□□□ -0.73
ABCA3-203ENST00000563623 ZNF41P51814 821 aaPredicted RBP10.47□□□□□ -0.73
ABCA3-203ENST00000563623 RSPO4Q2I0M5 234 aaPredicted RBP10.47□□□□□ -0.73
ABCA3-203ENST00000563623 WDFY1Q8IWB7 410 aa10.47□□□□□ -0.73
ABCA3-203ENST00000563623 SLC30A7Q8NEW0 376 aa10.47□□□□□ -0.73
ABCA3-203ENST00000563623 OR56B1Q8NGI3 324 aa10.47□□□□□ -0.73
ABCA3-203ENST00000563623 FNDC9Q8TBE3 224 aa10.47□□□□□ -0.73
ABCA3-203ENST00000563623 GLYATL2Q8WU03 294 aa10.47□□□□□ -0.73
ABCA3-203ENST00000563623 TCTEX1D2Q8WW35 142 aa10.47□□□□□ -0.73
ABCA3-203ENST00000563623 DDIT4LQ96D03 193 aa10.47□□□□□ -0.73
ABCA3-203ENST00000563623 NMES1Q9C002 83 aa10.47□□□□□ -0.73
ABCA3-203ENST00000563623 PPP4R1LQ9P1A2 415 aa10.47□□□□□ -0.73
ABCA3-203ENST00000563623 ZNF107Q9UII5 783 aaPredicted RBP10.47□□□□□ -0.73
ABCA3-203ENST00000563623 WIF1Q9Y5W5 379 aa10.47□□□□□ -0.73
ABCA3-203ENST00000563623 TCAPO15273 167 aa10.47□□□□□ -0.73
ABCA3-203ENST00000563623 CDC14BO60729 498 aa10.47□□□□□ -0.73
ABCA3-203ENST00000563623 EIF2S3LQ2VIR3 472 aaKnown RBP10.47□□□□□ -0.73
ABCA3-203ENST00000563623 PLAC9Q5JTB6 97 aa10.47□□□□□ -0.73
ABCA3-203ENST00000563623 FAHD2BQ6P2I3 314 aaPredicted RBP10.47□□□□□ -0.73
ABCA3-203ENST00000563623 ARHGEF39Q8N4T4 335 aa10.47□□□□□ -0.73
ABCA3-203ENST00000563623 ZNF784Q8NCA9 323 aaPredicted RBP10.47□□□□□ -0.73
ABCA3-203ENST00000563623 RNF133Q8WVZ7 376 aa10.47□□□□□ -0.73
ABCA3-203ENST00000563623 FAHD2AQ96GK7 314 aa10.47□□□□□ -0.73
ABCA3-203ENST00000563623 CLCC1Q96S66 551 aa10.47□□□□□ -0.73
ABCA3-203ENST00000563623 VN1R1Q9GZP7 353 aa10.47□□□□□ -0.73
ABCA3-203ENST00000563623 METTL7AQ9H8H3 244 aa10.47□□□□□ -0.73
ABCA3-203ENST00000563623 GPR37O15354 613 aa10.46□□□□□ -0.73
ABCA3-203ENST00000563623 FGF16O43320 207 aa10.46□□□□□ -0.73
ABCA3-203ENST00000563623 RAD51DO75771 328 aa10.46□□□□□ -0.73
ABCA3-203ENST00000563623 EN2P19622 333 aaPredicted RBP10.46□□□□□ -0.73
ABCA3-203ENST00000563623 RPL12P30050 165 aaKnown RBP10.46□□□□□ -0.73
ABCA3-203ENST00000563623 MMP16P51512 607 aa10.46□□□□□ -0.73
ABCA3-203ENST00000563623 F2RL1P55085 397 aa10.46□□□□□ -0.73
ABCA3-203ENST00000563623 PRSS12P56730 875 aa10.46□□□□□ -0.73
ABCA3-203ENST00000563623 FABP9Q0Z7S8 132 aa10.46□□□□□ -0.73
ABCA3-203ENST00000563623 SP6Q3SY56 376 aa10.46□□□□□ -0.73
ABCA3-203ENST00000563623 DHRS7BQ6IAN0 325 aaPredicted RBP10.46□□□□□ -0.73
ABCA3-203ENST00000563623 SEC11CQ9BY50 192 aa10.46□□□□□ -0.73
ABCA3-203ENST00000563623 SMCO4Q9NRQ5 59 aa10.46□□□□□ -0.73
ABCA3-203ENST00000563623 GPR132Q9UNW8 380 aa10.46□□□□□ -0.73
ABCA3-203ENST00000563623 B3GALT5Q9Y2C3 310 aa10.46□□□□□ -0.73
ABCA3-203ENST00000563623 KLF2Q9Y5W3 355 aaPredicted RBP10.46□□□□□ -0.73
ABCA3-203ENST00000563623 RALGAPA1Q6GYQ0 2036 aa10.46□□□□□ -0.73
ABCA3-203ENST00000563623 IGKV3-11P04433 115 aa10.46□□□□□ -0.73
ABCA3-203ENST00000563623 FCGR2AP12318 317 aa10.46□□□□□ -0.73
ABCA3-203ENST00000563623 LAP3P28838 519 aa10.46□□□□□ -0.73
ABCA3-203ENST00000563623 CAMLGP49069 296 aa10.46□□□□□ -0.73
ABCA3-203ENST00000563623 ACER2Q5QJU3 275 aa10.46□□□□□ -0.73
ABCA3-203ENST00000563623 ADAM5Q6NVV9 412 aa10.46□□□□□ -0.73
ABCA3-203ENST00000563623 IL34Q6ZMJ4 242 aa10.46□□□□□ -0.73
ABCA3-203ENST00000563623 SULF2Q8IWU5 870 aa10.46□□□□□ -0.73
ABCA3-203ENST00000563623 TMEM68Q96MH6 324 aa10.46□□□□□ -0.73
ABCA3-203ENST00000563623 CYTL1Q9NRR1 136 aa10.46□□□□□ -0.73
ABCA3-203ENST00000563623 FAM206AQ9NX38 181 aa10.46□□□□□ -0.73
ABCA3-203ENST00000563623 PCDHGA1Q9Y5H4 931 aa10.46□□□□□ -0.73
ABCA3-203ENST00000563623 B3GALT1Q9Y5Z6 326 aa10.46□□□□□ -0.73
ABCA3-203ENST00000563623 VCANP13611 3396 aa10.46□□□□□ -0.73
ABCA3-203ENST00000563623 PMS2P1A4D2B8 440 aa10.46□□□□□ -0.74
ABCA3-203ENST00000563623 SLC33A1O00400 549 aaPredicted RBP10.46□□□□□ -0.74
ABCA3-203ENST00000563623 XRCC2O43543 280 aa10.46□□□□□ -0.74
ABCA3-203ENST00000563623 ISG15P05161 165 aa10.46□□□□□ -0.74
ABCA3-203ENST00000563623 OR2B8PP59922 312 aa10.46□□□□□ -0.74
ABCA3-203ENST00000563623 GABREP78334 506 aa10.46□□□□□ -0.74
ABCA3-203ENST00000563623 HYAL1Q12794 435 aa10.46□□□□□ -0.74
ABCA3-203ENST00000563623 MFAP5Q13361 173 aa10.46□□□□□ -0.74
ABCA3-203ENST00000563623 ABCA11PQ4W5N1 156 aa10.46□□□□□ -0.74
ABCA3-203ENST00000563623 OR8B12Q8NGG6 310 aa10.46□□□□□ -0.74
ABCA3-203ENST00000563623 OR1N1Q8NGS0 311 aa10.46□□□□□ -0.74
ABCA3-203ENST00000563623 OR13G1Q8NGZ3 307 aa10.46□□□□□ -0.74
ABCA3-203ENST00000563623 OR1L3Q8NH93 324 aa10.46□□□□□ -0.74
ABCA3-203ENST00000563623 PTX4Q96A99 478 aa10.46□□□□□ -0.74
ABCA3-203ENST00000563623 ZNF775Q96BV0 537 aaPredicted RBP10.46□□□□□ -0.74
ABCA3-203ENST00000563623 KIRREL1Q96J84 757 aa10.46□□□□□ -0.74
ABCA3-203ENST00000563623 RAB18Q9NP72 206 aa10.46□□□□□ -0.74
ABCA3-203ENST00000563623 SERINC1Q9NRX5 453 aa10.46□□□□□ -0.74
ABCA3-203ENST00000563623 PLEKHJ1Q9NW61 149 aa10.46□□□□□ -0.74
ABCA3-203ENST00000563623 PCDH15Q96QU1 1955 aa10.46□□□□□ -0.74
ABCA3-203ENST00000563623 A0A0A6YYD4 124 aa10.45□□□□□ -0.74
ABCA3-203ENST00000563623 EPOPA6NHQ4 379 aa10.45□□□□□ -0.74
ABCA3-203ENST00000563623 ZNF850A8MQ14 1090 aa10.45□□□□□ -0.74
ABCA3-203ENST00000563623 DIRAS3O95661 229 aa10.45□□□□□ -0.74
ABCA3-203ENST00000563623 OR8U9P0C7N5 309 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms