RNA–Protein interactions for RNA: ENST00000562875.5

KARS-203, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 3

Gene KARS, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-203ENST00000562875 RPH3AQ9Y2J0 694 aaPredicted RBP7.04□□□□□ -1.28
KARS-203ENST00000562875 MRPS28Q9Y2Q9 187 aaKnown RBP7.04□□□□□ -1.28
KARS-203ENST00000562875 MRPS18BQ9Y676 258 aaKnown RBP7.04□□□□□ -1.28
KARS-203ENST00000562875 PHF3Q92576 2039 aaKnown RBP7.04□□□□□ -1.28
KARS-203ENST00000562875 FREM3P0C091 2139 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 A0A087WV48 116 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 A0A0B4J2A0 478 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 C9orf170A2RU37 121 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 RAB19A4D1S5 217 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 DIRC3C9JPN6 131 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 FTCDNL1E5RQL4 147 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 MS4A18H0YCH9 400 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 TP53I11O14683 189 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 PRKNO60260 465 aaPredicted RBP7.03□□□□□ -1.28
KARS-203ENST00000562875 ALOX12BO75342 701 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 PIAS2O75928 621 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 ZFAND5O76080 213 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 DUS4LO95620 317 aaKnown RBP7.03□□□□□ -1.28
KARS-203ENST00000562875 RLN2P04090 185 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 HOXD4P09016 255 aaPredicted RBP7.03□□□□□ -1.28
KARS-203ENST00000562875 CNR1P21554 472 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 GCSHP23434 173 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 ZBTB25P24278 435 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 EIF1P41567 113 aaKnown RBP7.03□□□□□ -1.28
KARS-203ENST00000562875 OR3A2P47893 321 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 LUMP51884 338 aaPredicted RBP7.03□□□□□ -1.28
KARS-203ENST00000562875 LBX1P52954 281 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 OR1D5P58170 312 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 MC2RQ01718 297 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 FOXF1Q12946 379 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 AIMP2Q13155 320 aaKnown RBP7.03□□□□□ -1.28
KARS-203ENST00000562875 BTN1A1Q13410 526 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 ARFRP1Q13795 201 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 SMCO1Q147U7 214 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 PPA1Q15181 289 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 ETFDHQ16134 617 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 MS4A18Q3C1V0 323 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 LRRC37A5PQ49AS3 106 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 SMUG1Q53HV7 270 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 PAN3Q58A45 887 aaKnown RBP7.03□□□□□ -1.28
KARS-203ENST00000562875 STPG1Q5TH74 334 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 DCAF12L2Q5VW00 463 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 RHBDD2Q6NTF9 364 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 TMEM81Q6P7N7 255 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 KCTD9Q7L273 389 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 OR5H2Q8NGV7 314 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 OR4K15Q8NH41 348 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 ST7LQ8TDW4 575 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 CASTOR1Q8WTX7 329 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 MITD1Q8WV92 249 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 RLN3Q8WXF3 142 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 C11orf40Q8WZ69 217 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 DCUN1D4Q92564 292 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 ARL11Q969Q4 196 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 NARS2Q96I59 477 aaKnown RBP7.03□□□□□ -1.28
KARS-203ENST00000562875 SLC6A7Q99884 636 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 TMEM59Q9BXS4 323 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 OR11A1Q9GZK7 315 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 SHARPINQ9H0F6 387 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 KCNK15Q9H427 330 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 ZNF768Q9H5H4 540 aaKnown RBP7.03□□□□□ -1.28
KARS-203ENST00000562875 CHMP1AQ9HD42 196 aaPredicted RBP7.03□□□□□ -1.28
KARS-203ENST00000562875 FAM206AQ9NX38 181 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 SHPKQ9UHJ6 478 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 C14orf166Q9Y224 244 aaKnown RBP7.03□□□□□ -1.28
KARS-203ENST00000562875 RALGAPA1Q6GYQ0 2036 aa7.03□□□□□ -1.28
KARS-203ENST00000562875 PCNX3Q9H6A9 2034 aa7.02□□□□□ -1.29
KARS-203ENST00000562875 TRAV14DV4A0A0A6YYC5 116 aa7.02□□□□□ -1.29
KARS-203ENST00000562875 TRBV11-1A0A0K0K1C0 115 aa7.02□□□□□ -1.29
KARS-203ENST00000562875 PRSS29PA6NIE9 313 aa7.02□□□□□ -1.29
KARS-203ENST00000562875 LIPT2A6NK58 231 aa7.02□□□□□ -1.29
KARS-203ENST00000562875 ZNF785A8K8V0 405 aa7.02□□□□□ -1.29
KARS-203ENST00000562875 AHRRA9YTQ3 701 aa7.02□□□□□ -1.29
KARS-203ENST00000562875 MTRF1O75570 445 aaKnown RBP7.02□□□□□ -1.29
KARS-203ENST00000562875 APOC3P02656 99 aa7.02□□□□□ -1.29
KARS-203ENST00000562875 TTRP02766 147 aa7.02□□□□□ -1.29
KARS-203ENST00000562875 ZNF735P0CB33 412 aa7.02□□□□□ -1.29
KARS-203ENST00000562875 SPTBP11277 2137 aa7.02□□□□□ -1.29
KARS-203ENST00000562875 ZNF43P17038 809 aa7.02□□□□□ -1.29
KARS-203ENST00000562875 AKR1C4P17516 323 aa7.02□□□□□ -1.29
KARS-203ENST00000562875 CTRB1P17538 263 aa7.02□□□□□ -1.29
KARS-203ENST00000562875 PSMB6P28072 239 aa7.02□□□□□ -1.29
KARS-203ENST00000562875 HRH1P35367 487 aa7.02□□□□□ -1.29
KARS-203ENST00000562875 CLDN6P56747 220 aa7.02□□□□□ -1.29
KARS-203ENST00000562875 SOX8P57073 446 aa7.02□□□□□ -1.29
KARS-203ENST00000562875 SLC35A1P78382 337 aa7.02□□□□□ -1.29
KARS-203ENST00000562875 DEFA5Q01523 94 aa7.02□□□□□ -1.29
KARS-203ENST00000562875 NAAAQ02083 359 aa7.02□□□□□ -1.29
KARS-203ENST00000562875 PPP1R1AQ13522 171 aa7.02□□□□□ -1.29
KARS-203ENST00000562875 TMEM128Q5BJH2 165 aa7.02□□□□□ -1.29
KARS-203ENST00000562875 LY6G6FQ5SQ64 297 aa7.02□□□□□ -1.29
KARS-203ENST00000562875 PXDC1Q5TGL8 231 aa7.02□□□□□ -1.29
KARS-203ENST00000562875 CTRB2Q6GPI1 263 aa7.02□□□□□ -1.29
KARS-203ENST00000562875 JMJD6Q6NYC1 403 aaPredicted RBP7.02□□□□□ -1.29
KARS-203ENST00000562875 ZNF813Q6ZN06 617 aa7.02□□□□□ -1.29
KARS-203ENST00000562875 Q6ZS52 159 aa7.02□□□□□ -1.29
KARS-203ENST00000562875 MDGA2Q7Z553 956 aa7.02□□□□□ -1.29
KARS-203ENST00000562875 ABHD12BQ7Z5M8 362 aaPredicted RBP7.02□□□□□ -1.29
KARS-203ENST00000562875 ANKRD37Q7Z713 158 aa7.02□□□□□ -1.29
KARS-203ENST00000562875 NAA40Q86UY6 237 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms