RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 TICRRQ7Z2Z1 1910 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 SPTBP11277 2137 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 CENPVL1A0A0U1RR11 272 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 SLC17A2O00624 439 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 DFFBO76075 338 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 IGHV3-9P01782 118 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 OR4E1P0C645 316 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 TBPP20226 339 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 PTH2RP49190 550 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 SOX8P57073 446 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 ZNF121P58317 390 aaPredicted RBP6.72□□□□□ -1.33
TCF4-216ENST00000562680 RRAS2P62070 204 aaPredicted RBP6.72□□□□□ -1.33
TCF4-216ENST00000562680 TATDN3Q17R31 274 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 GSG1Q2KHT4 349 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 SOWAHCQ53LP3 525 aaPredicted RBP6.72□□□□□ -1.33
TCF4-216ENST00000562680 LSRQ86X29 649 aaPredicted RBP6.72□□□□□ -1.33
TCF4-216ENST00000562680 ANGPTL5Q86XS5 388 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 TGIF2LXQ8IUE1 241 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 OR4M1Q8NGD0 313 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 SCARB1Q8WTV0 552 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 OR2M2Q96R28 347 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 OR51B6Q9H340 312 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 AKIP1Q9NQ31 210 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 TAS2R4Q9NYW5 299 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 FBXL2Q9UKC9 423 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 ARID1BQ8NFD5 2236 aaPredicted RBP6.72□□□□□ -1.33
TCF4-216ENST00000562680 A0A1B0GVC2 190 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 C13orf42A0A1B0GVH6 325 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 TIAF1O95411 115 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 CTSBP07858 339 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 CD59P13987 128 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 GABRR1P24046 479 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 BLVRBP30043 206 aaPredicted RBP6.71□□□□□ -1.33
TCF4-216ENST00000562680 GNRHRP30968 328 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 DCTDP32321 178 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 ALDH3B1P43353 468 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 KIR2DL3P43628 341 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 NDUFA6P56556 154 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 S100A10P60903 97 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 IRF3Q14653 427 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 RBMS2Q15434 407 aaKnown RBP6.71□□□□□ -1.33
TCF4-216ENST00000562680 LYPD8Q6UX82 237 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 STAC2Q6ZMT1 411 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 Q6ZTK2 550 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 MTURNQ8N3F0 131 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 BOLLQ8N9W6 283 aaKnown RBP6.71□□□□□ -1.33
TCF4-216ENST00000562680 ZNF383Q8NA42 475 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 FAM71CQ8NEG0 241 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 RNF170Q96K19 258 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 IMMP1LQ96LU5 166 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 FYTTD1Q96QD9 318 aaKnown RBP6.71□□□□□ -1.33
TCF4-216ENST00000562680 SLC25A21Q9BQT8 299 aaPredicted RBP6.71□□□□□ -1.33
TCF4-216ENST00000562680 AMDHD2Q9Y303 409 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 UBE2J1Q9Y385 318 aaPredicted RBP6.71□□□□□ -1.33
TCF4-216ENST00000562680 RHBDD3Q9Y3P4 386 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 EP300Q09472 2414 aaPredicted RBP6.71□□□□□ -1.33
TCF4-216ENST00000562680 KIR2DS1A0A191URI9 304 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 A0A1W2PNV4 684 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 NRASP01111 189 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 KIR2DS4P43632 304 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 CXADRP78310 365 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 KIR2DS1Q14954 304 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 OPCMLQ14982 345 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 PCK2Q16822 640 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 SLAMF9Q96A28 289 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 REEP6Q96HR9 211 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 WFIKKN1Q96NZ8 548 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 TTTY12Q9BZ98 90 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 SELENOIQ9C0D9 397 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 PRO3102Q9H379 93 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 RIMS4Q9H426 269 aaPredicted RBP6.71□□□□□ -1.33
TCF4-216ENST00000562680 KCNS2Q9ULS6 477 aa6.71□□□□□ -1.33
TCF4-216ENST00000562680 TRGV8A0A0C4DH27 118 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 ERVH48-1M5A8F1 160 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 OGG1O15527 345 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 CTXN2P0C2S0 81 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 SSTR2P30874 369 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 GDNFP39905 211 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 SRP9P49458 86 aaKnown RBP6.71□□□□□ -1.34
TCF4-216ENST00000562680 PRRX1P54821 245 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 SLC9A3R2Q15599 337 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 MPPED2Q15777 294 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 SFRP4Q6FHJ7 346 aaPredicted RBP6.71□□□□□ -1.34
TCF4-216ENST00000562680 GSG1LQ6UXU4 331 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 CDC20BQ86Y33 519 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 C1orf174Q8IYL3 243 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 UBAC2Q8NBM4 344 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 PCNPQ8WW12 178 aaKnown RBP6.71□□□□□ -1.34
TCF4-216ENST00000562680 ELMOD3Q96FG2 381 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 GMPPAQ96IJ6 420 aaPredicted RBP6.71□□□□□ -1.34
TCF4-216ENST00000562680 GP6Q9HCN6 339 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 ENY2Q9NPA8 101 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 LRP5LA4QPB2 252 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 ZNF354AO60765 605 aaPredicted RBP6.71□□□□□ -1.34
TCF4-216ENST00000562680 CD34P28906 385 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 FUT6P51993 359 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 SNU13P55769 128 aaKnown RBP6.71□□□□□ -1.34
TCF4-216ENST00000562680 CTF1Q16619 201 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 ZDHHC23Q8IYP9 409 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 FBLIM1Q8WUP2 373 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms