RNA–Protein interactions for RNA: ENST00000561977.1

AC112236.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC112236.1, Length 1,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC112236.1-201ENST00000561977 TREM2Q9NZC2 230 aa8.19□□□□□ -1.1
AC112236.1-201ENST00000561977 RNF7Q9UBF6 113 aa8.19□□□□□ -1.1
AC112236.1-201ENST00000561977 PPIAL4AQ9Y536 164 aa8.19□□□□□ -1.1
AC112236.1-201ENST00000561977 TEP1Q99973 2627 aaKnown RBP8.18□□□□□ -1.1
AC112236.1-201ENST00000561977 TMEM269A0A1B0GVZ9 245 aa8.18□□□□□ -1.1
AC112236.1-201ENST00000561977 IGHV2-70P01814 119 aa8.18□□□□□ -1.1
AC112236.1-201ENST00000561977 KRT8P05787 483 aa8.18□□□□□ -1.1
AC112236.1-201ENST00000561977 OR2T7P0C7T2 308 aa8.18□□□□□ -1.1
AC112236.1-201ENST00000561977 RPS2P15880 293 aaKnown RBP8.18□□□□□ -1.1
AC112236.1-201ENST00000561977 ALOX5APP20292 161 aa8.18□□□□□ -1.1
AC112236.1-201ENST00000561977 SLC2A5P22732 501 aa8.18□□□□□ -1.1
AC112236.1-201ENST00000561977 ALDH3A2P51648 485 aa8.18□□□□□ -1.1
AC112236.1-201ENST00000561977 ZNF121P58317 390 aaPredicted RBP8.18□□□□□ -1.1
AC112236.1-201ENST00000561977 LMO4P61968 165 aa8.18□□□□□ -1.1
AC112236.1-201ENST00000561977 ZNF92Q03936 586 aa8.18□□□□□ -1.1
AC112236.1-201ENST00000561977 GLYATL3Q5SZD4 288 aa8.18□□□□□ -1.1
AC112236.1-201ENST00000561977 AVPI1Q5T686 147 aa8.18□□□□□ -1.1
AC112236.1-201ENST00000561977 CFAP161Q6P656 301 aa8.18□□□□□ -1.1
AC112236.1-201ENST00000561977 DCDC5Q6ZRR9 648 aa8.18□□□□□ -1.1
AC112236.1-201ENST00000561977 FAM57BQ71RH2 274 aa8.18□□□□□ -1.1
AC112236.1-201ENST00000561977 FAM220AQ7Z4H9 259 aa8.18□□□□□ -1.1
AC112236.1-201ENST00000561977 COMMD2Q86X83 199 aa8.18□□□□□ -1.1
AC112236.1-201ENST00000561977 TCEANCQ8N8B7 351 aa8.18□□□□□ -1.1
AC112236.1-201ENST00000561977 OR2T27Q8NH04 317 aa8.18□□□□□ -1.1
AC112236.1-201ENST00000561977 NEIL1Q96FI4 390 aaPredicted RBP8.18□□□□□ -1.1
AC112236.1-201ENST00000561977 TECTBQ96PL2 329 aa8.18□□□□□ -1.1
AC112236.1-201ENST00000561977 RNPEPL1Q9HAU8 725 aa8.18□□□□□ -1.1
AC112236.1-201ENST00000561977 NEK6Q9HC98 313 aa8.18□□□□□ -1.1
AC112236.1-201ENST00000561977 CLN6Q9NWW5 311 aa8.18□□□□□ -1.1
AC112236.1-201ENST00000561977 USE1Q9NZ43 259 aa8.18□□□□□ -1.1
AC112236.1-201ENST00000561977 ERVK-18Q9QC07 812 aa8.18□□□□□ -1.1
AC112236.1-201ENST00000561977 IKZF2Q9UKS7 526 aa8.18□□□□□ -1.1
AC112236.1-201ENST00000561977 OAZ3Q9UMX2 235 aa8.18□□□□□ -1.1
AC112236.1-201ENST00000561977 hCG_1807616A0A1W2PRN6 198 aa8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 A6NLC8 198 aa8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 DHRS7CA6NNS2 312 aa8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 A8MXK9 166 aa8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 TCF21O43680 179 aa8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 SULT1C4O75897 302 aa8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 PTBP3O95758 552 aaKnown RBP8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 LIPFP07098 398 aa8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 MUC1P15941 1255 aaPredicted RBP8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 CA6P23280 308 aa8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 RPS27P42677 84 aaKnown RBP8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 BPIFB3P59826 476 aa8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 GNB2P62879 340 aa8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 RIPPLY1Q0D2K3 151 aa8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 MRPL28Q13084 256 aaKnown RBP8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 RSPO1Q2MKA7 263 aaPredicted RBP8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 SNAI3Q3KNW1 292 aa8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 C12orf73Q69YU5 71 aa8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 FAHD2BQ6P2I3 314 aaPredicted RBP8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 LRRN1Q6UXK5 716 aa8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 Q6ZR03 302 aa8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 PLEKHG7Q6ZR37 379 aa8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 KCTD20Q7Z5Y7 419 aa8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 AMIGO2Q86SJ2 522 aa8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 MOGAT3Q86VF5 341 aa8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 HS3ST5Q8IZT8 346 aa8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 OR10AD1Q8NGE0 317 aa8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 OR56B2PQ8NGI1 322 aa8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 OR10S1Q8NGN2 331 aa8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 FOXRED1Q96CU9 486 aaPredicted RBP8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 FAHD2AQ96GK7 314 aa8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 RDH12Q96NR8 316 aa8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 OR8B4Q96RC9 309 aa8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 IL4I1Q96RQ9 567 aa8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 CIB1Q99828 191 aa8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 PAPOLGQ9BWT3 736 aaKnown RBP8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 RIBC2Q9H4K1 309 aa8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 MED20Q9H944 212 aa8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 ZMAT3Q9HA38 289 aaKnown RBP8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 LRP12Q9Y561 859 aa8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 N6AMT1Q9Y5N5 214 aa8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 SNX5Q9Y5X3 404 aa8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.17□□□□□ -1.1
AC112236.1-201ENST00000561977 ZNF816-ZNF321PA0A0X1KG74 233 aa8.16□□□□□ -1.1
AC112236.1-201ENST00000561977 IRGMA1A4Y4 181 aa8.16□□□□□ -1.1
AC112236.1-201ENST00000561977 OR5B21A6NL26 309 aa8.16□□□□□ -1.1
AC112236.1-201ENST00000561977 F5H5P2 479 aa8.16□□□□□ -1.1
AC112236.1-201ENST00000561977 H3BUI4 141 aa8.16□□□□□ -1.1
AC112236.1-201ENST00000561977 MLNRO43193 412 aa8.16□□□□□ -1.1
AC112236.1-201ENST00000561977 PLPP2O43688 288 aa8.16□□□□□ -1.1
AC112236.1-201ENST00000561977 SELENOFO60613 162 aa8.16□□□□□ -1.1
AC112236.1-201ENST00000561977 ECDO95905 644 aaPredicted RBP8.16□□□□□ -1.1
AC112236.1-201ENST00000561977 CST4P01036 141 aa8.16□□□□□ -1.1
AC112236.1-201ENST00000561977 PPIAL4GP0DN37 164 aa8.16□□□□□ -1.1
AC112236.1-201ENST00000561977 HTR1FP30939 366 aa8.16□□□□□ -1.1
AC112236.1-201ENST00000561977 ERFP50548 548 aa8.16□□□□□ -1.1
AC112236.1-201ENST00000561977 ACTA2P62736 377 aa8.16□□□□□ -1.1
AC112236.1-201ENST00000561977 ACTG2P63267 376 aa8.16□□□□□ -1.1
AC112236.1-201ENST00000561977 FAM3AP98173 230 aa8.16□□□□□ -1.1
AC112236.1-201ENST00000561977 MED21Q13503 144 aa8.16□□□□□ -1.1
AC112236.1-201ENST00000561977 PMS2P11Q13670 270 aa8.16□□□□□ -1.1
AC112236.1-201ENST00000561977 KPNB1Q14974 876 aaKnown RBP8.16□□□□□ -1.1
AC112236.1-201ENST00000561977 OR8B8Q15620 311 aa8.16□□□□□ -1.1
AC112236.1-201ENST00000561977 ZSCAN26Q16670 478 aa8.16□□□□□ -1.1
AC112236.1-201ENST00000561977 MICBQ29980 383 aa8.16□□□□□ -1.1
AC112236.1-201ENST00000561977 ZNF404Q494X3 552 aa8.16□□□□□ -1.1
AC112236.1-201ENST00000561977 TMEM236Q5W0B7 351 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms