RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 FAM216BQ8N7L0 139 aa20.92■□□□□ 0.94
NME3-202ENST00000561637 NRBF2Q96F24 287 aa20.92■□□□□ 0.94
NME3-202ENST00000561637 TEAD3Q99594 435 aa20.92■□□□□ 0.94
NME3-202ENST00000561637 LAMP5Q9UJQ1 280 aa20.92■□□□□ 0.94
NME3-202ENST00000561637 NOTCH1P46531 2555 aa20.92■□□□□ 0.94
NME3-202ENST00000561637 MAGEB4O15481 346 aaPredicted RBP20.91■□□□□ 0.94
NME3-202ENST00000561637 CFL1P23528 166 aaKnown RBP20.91■□□□□ 0.94
NME3-202ENST00000561637 MZT1Q08AG7 82 aa20.91■□□□□ 0.94
NME3-202ENST00000561637 KCNJ8Q15842 424 aa20.91■□□□□ 0.94
NME3-202ENST00000561637 AMIGO2Q86SJ2 522 aa20.91■□□□□ 0.94
NME3-202ENST00000561637 CSNK2A3Q8NEV1 391 aa20.91■□□□□ 0.94
NME3-202ENST00000561637 OR5T2Q8NGG2 359 aa20.91■□□□□ 0.94
NME3-202ENST00000561637 OR5K1Q8NHB7 308 aa20.91■□□□□ 0.94
NME3-202ENST00000561637 PKP2Q99959 881 aa20.91■□□□□ 0.94
NME3-202ENST00000561637 TLNRD1Q9H1K6 362 aa20.91■□□□□ 0.94
NME3-202ENST00000561637 WDR13Q9H1Z4 485 aa20.91■□□□□ 0.94
NME3-202ENST00000561637 FAM206AQ9NX38 181 aa20.91■□□□□ 0.94
NME3-202ENST00000561637 NPY4RP50391 375 aa20.9■□□□□ 0.94
NME3-202ENST00000561637 MFGE8Q08431 387 aaPredicted RBP20.9■□□□□ 0.94
NME3-202ENST00000561637 ATP6AP1Q15904 470 aa20.9■□□□□ 0.94
NME3-202ENST00000561637 BTN2A1Q7KYR7 527 aa20.9■□□□□ 0.94
NME3-202ENST00000561637 GALNT4Q8N4A0 578 aa20.9■□□□□ 0.94
NME3-202ENST00000561637 OR5P3Q8WZ94 311 aa20.9■□□□□ 0.94
NME3-202ENST00000561637 ST8SIA4Q92187 359 aa20.9■□□□□ 0.94
NME3-202ENST00000561637 PIGCQ92535 297 aa20.9■□□□□ 0.94
NME3-202ENST00000561637 YIPF3Q9GZM5 350 aa20.9■□□□□ 0.94
NME3-202ENST00000561637 RGCCQ9H4X1 137 aa20.9■□□□□ 0.94
NME3-202ENST00000561637 RNPEPL1Q9HAU8 725 aa20.9■□□□□ 0.94
NME3-202ENST00000561637 SNTG1Q9NSN8 517 aa20.9■□□□□ 0.94
NME3-202ENST00000561637 ZNF879B4DU55 563 aa20.89■□□□□ 0.93
NME3-202ENST00000561637 PRB3Q04118 309 aaPredicted RBP20.89■□□□□ 0.93
NME3-202ENST00000561637 MICU1Q9BPX6 476 aa20.89■□□□□ 0.93
NME3-202ENST00000561637 SIRPDQ9H106 197 aa20.89■□□□□ 0.93
NME3-202ENST00000561637 TNFRSF19Q9NS68 423 aa20.89■□□□□ 0.93
NME3-202ENST00000561637 CST4P01036 141 aa20.88■□□□□ 0.93
NME3-202ENST00000561637 RNASE1P07998 156 aaKnown RBP20.88■□□□□ 0.93
NME3-202ENST00000561637 ARF6P62330 175 aa20.88■□□□□ 0.93
NME3-202ENST00000561637 TCEANCQ8N8B7 351 aa20.88■□□□□ 0.93
NME3-202ENST00000561637 RTL8AQ9BWD3 113 aa20.88■□□□□ 0.93
NME3-202ENST00000561637 NIPAL2Q9H841 368 aa20.88■□□□□ 0.93
NME3-202ENST00000561637 KRT84Q9NSB2 600 aa20.88■□□□□ 0.93
NME3-202ENST00000561637 MPC1Q9Y5U8 109 aa20.88■□□□□ 0.93
NME3-202ENST00000561637 ANXA2P2A6NMY6 339 aa20.87■□□□□ 0.93
NME3-202ENST00000561637 SRRM5B3KS81 715 aa20.87■□□□□ 0.93
NME3-202ENST00000561637 AKR7A2O43488 359 aa20.87■□□□□ 0.93
NME3-202ENST00000561637 NDUFA2O43678 99 aa20.87■□□□□ 0.93
NME3-202ENST00000561637 TOX4O94842 621 aa20.87■□□□□ 0.93
NME3-202ENST00000561637 DLX1P56177 255 aa20.87■□□□□ 0.93
NME3-202ENST00000561637 IL5RAQ01344 420 aa20.87■□□□□ 0.93
NME3-202ENST00000561637 IKZF1Q13422 519 aa20.87■□□□□ 0.93
NME3-202ENST00000561637 MICBQ29980 383 aa20.87■□□□□ 0.93
NME3-202ENST00000561637 SLX4IPQ5VYV7 408 aa20.87■□□□□ 0.93
NME3-202ENST00000561637 CD276Q5ZPR3 534 aa20.87■□□□□ 0.93
NME3-202ENST00000561637 PLEKHG7Q6ZR37 379 aa20.87■□□□□ 0.93
NME3-202ENST00000561637 KCTD8Q6ZWB6 473 aa20.87■□□□□ 0.93
NME3-202ENST00000561637 PDZD9Q8IXQ8 264 aa20.87■□□□□ 0.93
NME3-202ENST00000561637 SCCPDHQ8NBX0 429 aa20.87■□□□□ 0.93
NME3-202ENST00000561637 DNAJC9Q8WXX5 260 aa20.87■□□□□ 0.93
NME3-202ENST00000561637 LRTOMTQ8WZ04 291 aa20.87■□□□□ 0.93
NME3-202ENST00000561637 RNF170Q96K19 258 aa20.87■□□□□ 0.93
NME3-202ENST00000561637 FAM71F1Q96KD3 344 aaPredicted RBP20.87■□□□□ 0.93
NME3-202ENST00000561637 WDFY2Q96P53 400 aa20.87■□□□□ 0.93
NME3-202ENST00000561637 OR8B4Q96RC9 309 aa20.87■□□□□ 0.93
NME3-202ENST00000561637 IL4I1Q96RQ9 567 aa20.87■□□□□ 0.93
NME3-202ENST00000561637 TEX12Q9BXU0 123 aa20.87■□□□□ 0.93
NME3-202ENST00000561637 PBOV1Q9GZY1 135 aa20.87■□□□□ 0.93
NME3-202ENST00000561637 TRIM36Q9NQ86 728 aa20.87■□□□□ 0.93
NME3-202ENST00000561637 KAAG1Q9UBP8 84 aa20.87■□□□□ 0.93
NME3-202ENST00000561637 WNK1Q9H4A3 2382 aa20.87■□□□□ 0.93
NME3-202ENST00000561637 CENPVL3A0A0U1RRI6 287 aa20.86■□□□□ 0.93
NME3-202ENST00000561637 TMEM269A0A1B0GVZ9 245 aa20.86■□□□□ 0.93
NME3-202ENST00000561637 ZAR1LA6NP61 321 aa20.86■□□□□ 0.93
NME3-202ENST00000561637 HOXA3O43365 443 aaPredicted RBP20.86■□□□□ 0.93
NME3-202ENST00000561637 RHBDL1O75783 438 aa20.86■□□□□ 0.93
NME3-202ENST00000561637 DCTDP32321 178 aa20.86■□□□□ 0.93
NME3-202ENST00000561637 POLR2IP36954 125 aaKnown RBP20.86■□□□□ 0.93
NME3-202ENST00000561637 MTNR1AP48039 350 aa20.86■□□□□ 0.93
NME3-202ENST00000561637 ESRRGP62508 458 aa20.86■□□□□ 0.93
NME3-202ENST00000561637 EFNB1P98172 346 aa20.86■□□□□ 0.93
NME3-202ENST00000561637 CEP78Q5JTW2 689 aa20.86■□□□□ 0.93
NME3-202ENST00000561637 GPR157Q5UAW9 335 aa20.86■□□□□ 0.93
NME3-202ENST00000561637 LCN1P1Q5VSP4 162 aa20.86■□□□□ 0.93
NME3-202ENST00000561637 AADACL4Q5VUY2 407 aa20.86■□□□□ 0.93
NME3-202ENST00000561637 C12orf73Q69YU5 71 aa20.86■□□□□ 0.93
NME3-202ENST00000561637 STUMQ69YW2 141 aa20.86■□□□□ 0.93
NME3-202ENST00000561637 ZDHHC23Q8IYP9 409 aa20.86■□□□□ 0.93
NME3-202ENST00000561637 OR51E1Q8TCB6 317 aa20.86■□□□□ 0.93
NME3-202ENST00000561637 CNN2Q99439 309 aaKnown RBP20.86■□□□□ 0.93
NME3-202ENST00000561637 APOL4Q9BPW4 351 aa20.86■□□□□ 0.93
NME3-202ENST00000561637 GPR84Q9NQS5 396 aa20.86■□□□□ 0.93
NME3-202ENST00000561637 RPUSD1Q9UJJ7 312 aaKnown RBP20.86■□□□□ 0.93
NME3-202ENST00000561637 IKZF2Q9UKS7 526 aa20.86■□□□□ 0.93
NME3-202ENST00000561637 G3V2T6 193 aa20.85■□□□□ 0.93
NME3-202ENST00000561637 MUC1P15941 1255 aaPredicted RBP20.85■□□□□ 0.93
NME3-202ENST00000561637 GPM6AP51674 278 aa20.85■□□□□ 0.93
NME3-202ENST00000561637 ROM1Q03395 351 aa20.85■□□□□ 0.93
NME3-202ENST00000561637 C1orf146Q5VVC0 180 aa20.85■□□□□ 0.93
NME3-202ENST00000561637 KDM4DQ6B0I6 523 aa20.85■□□□□ 0.93
NME3-202ENST00000561637 FAM81AQ8TBF8 368 aa20.85■□□□□ 0.93
NME3-202ENST00000561637 LHX4Q969G2 390 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms