RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 MSMPQ1L6U9 139 aa9.09□□□□□ -0.95
TPM1-229ENST00000561242 YIF1BQ5BJH7 314 aa9.09□□□□□ -0.95
TPM1-229ENST00000561242 CEP78Q5JTW2 689 aa9.09□□□□□ -0.95
TPM1-229ENST00000561242 OR2G6Q5TZ20 316 aa9.09□□□□□ -0.95
TPM1-229ENST00000561242 LHFPL2Q6ZUX7 228 aa9.09□□□□□ -0.95
TPM1-229ENST00000561242 PRSS48Q7RTY5 328 aa9.09□□□□□ -0.95
TPM1-229ENST00000561242 SATL1Q86VE3 508 aa9.09□□□□□ -0.95
TPM1-229ENST00000561242 MKXQ8IYA7 352 aa9.09□□□□□ -0.95
TPM1-229ENST00000561242 RFLNBQ8N5W9 214 aa9.09□□□□□ -0.95
TPM1-229ENST00000561242 BPESC1Q9GZL8 116 aa9.09□□□□□ -0.95
TPM1-229ENST00000561242 ZCCHC4Q9H5U6 513 aa9.09□□□□□ -0.95
TPM1-229ENST00000561242 ELL3Q9HB65 397 aaPredicted RBP9.09□□□□□ -0.95
TPM1-229ENST00000561242 GPR173Q9NS66 373 aa9.09□□□□□ -0.95
TPM1-229ENST00000561242 ERVK-18Q9QC07 812 aa9.09□□□□□ -0.95
TPM1-229ENST00000561242 MIOXQ9UGB7 285 aa9.09□□□□□ -0.95
TPM1-229ENST00000561242 LRRC42Q9Y546 428 aa9.09□□□□□ -0.95
TPM1-229ENST00000561242 FREM1Q5H8C1 2179 aa9.09□□□□□ -0.95
TPM1-229ENST00000561242 LRRK2Q5S007 2527 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 PNMA8CA0A1B0GUJ8 204 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 TRIM64A6NGJ6 449 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 TRIM64BA6NI03 449 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 H0YL77 283 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 J3QRE1 110 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 PSMA1P25786 263 aaKnown RBP9.08□□□□□ -0.96
TPM1-229ENST00000561242 GIFP27352 417 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 C21orf33P30042 268 aaPredicted RBP9.08□□□□□ -0.96
TPM1-229ENST00000561242 HAAOP46952 286 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 SOX2P48431 317 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 MTCP1P56278 107 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 GABARAPL2P60520 117 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 BTG1P62324 171 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 BDH1Q02338 343 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 ESCO2Q56NI9 601 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 AVPI1Q5T686 147 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 PRAMEF6Q5VXH4 476 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 CLEC9AQ6UXN8 241 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 PRSS45Q7RTY3 260 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 SLC36A1Q7Z2H8 476 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 BIVMQ86UB2 503 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 RDH10Q8IZV5 341 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 NANOGP1Q8N7R0 232 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 ZSCAN4Q8NAM6 433 aaPredicted RBP9.08□□□□□ -0.96
TPM1-229ENST00000561242 DEFB108BQ8NET1 73 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 OR1M1Q8NGA1 313 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 OR8B3Q8NGG8 313 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 OR14K1Q8NGZ2 314 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 TRMT10AQ8TBZ6 339 aaKnown RBP9.08□□□□□ -0.96
TPM1-229ENST00000561242 OR5P3Q8WZ94 311 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 FCGR1BQ92637 280 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 GTF3AQ92664 365 aaKnown RBP9.08□□□□□ -0.96
TPM1-229ENST00000561242 PPP1R14AQ96A00 147 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 SPSB1Q96BD6 273 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 TMIGD2Q96BF3 282 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 SMIM19Q96E16 107 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 OR8B2Q96RD0 313 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 SOX7Q9BT81 388 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 CDCA4Q9BXL8 241 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 TCF7L1Q9HCS4 588 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 GCM1Q9NP62 436 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 V9GYS6 101 aa9.08□□□□□ -0.96
TPM1-229ENST00000561242 USP9XQ93008 2570 aaPredicted RBP9.07□□□□□ -0.96
TPM1-229ENST00000561242 GCN1Q92616 2671 aaKnown RBP9.07□□□□□ -0.96
TPM1-229ENST00000561242 IGHV4-30-2A0A087WSY4 118 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 A6NIN4 97 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 ZNF879B4DU55 563 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 TRAPPC2LH3BP13 241 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 TMEM178BH3BS89 294 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 CDIPTO14735 213 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 FOXH1O75593 365 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 NCR1O76036 304 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 NXPH2O95156 264 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 TNFAIP8O95379 198 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 CYB5R3P00387 301 aaPredicted RBP9.07□□□□□ -0.96
TPM1-229ENST00000561242 LIMS3P0CW19 117 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 LIMS4P0CW20 117 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 RPS2P15880 293 aaKnown RBP9.07□□□□□ -0.96
TPM1-229ENST00000561242 ATF1P18846 271 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 GLRA1P23415 457 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 CRHBPP24387 322 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 THBS2P35442 1172 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 GATA4P43694 442 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 CAPZA1P52907 286 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 GMFBP60983 142 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 LOXL1Q08397 574 aaPredicted RBP9.07□□□□□ -0.96
TPM1-229ENST00000561242 SCGB2A2Q13296 93 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 CDK5R1Q15078 307 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 ZNF181Q2M3W8 571 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 RNLSQ5VYX0 342 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 HAGHLQ6PII5 290 aaPredicted RBP9.07□□□□□ -0.96
TPM1-229ENST00000561242 Q6ZR03 302 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 Q8IYB0 196 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 PRSS35Q8N3Z0 413 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 ZNF420Q8TAQ5 688 aaPredicted RBP9.07□□□□□ -0.96
TPM1-229ENST00000561242 NPRL2Q8WTW4 380 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 FBLIM1Q8WUP2 373 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 LRRC29Q8WV35 223 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 IGFBPL1Q8WX77 278 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 GHSRQ92847 366 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 LYZL4Q96KX0 146 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 YAE1D1Q9NRH1 226 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms