RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 CHRFAM7AQ494W8 412 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 ZNF404Q494X3 552 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 BCL2L15Q5TBC7 163 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 ZBTB37Q5TC79 503 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 TTC23Q5W5X9 447 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 TMEM42Q69YG0 159 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 GLCCI1Q86VQ1 547 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 MUC20Q8N307 709 aaPredicted RBP12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 KLHL36Q8N4N3 616 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 DHRSXQ8N5I4 330 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 GCSAMQ8N6F7 178 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 C19orf18Q8NEA5 215 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 SEMA6DQ8NFY4 1073 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 OR14K1Q8NGZ2 314 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 MICU1Q9BPX6 476 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 METTL17Q9H7H0 456 aaPredicted RBP12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 ACOXLQ9NUZ1 547 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 C1orf123Q9NWV4 160 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 CDC42EP3Q9UKI2 254 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 POLR3KQ9Y2Y1 108 aaPredicted RBP12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 PPIAL4AQ9Y536 164 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 PCDHGB1Q9Y5G3 927 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 TRAV20A0A0B4J274 112 aa12.77□□□□□ -0.37
SNRPA1-213ENST00000560856 DAPL1A0PJW8 107 aa12.77□□□□□ -0.37
SNRPA1-213ENST00000560856 KIAA1324LA8MWY0 1029 aaPredicted RBP12.77□□□□□ -0.37
SNRPA1-213ENST00000560856 FAHP16930 419 aa12.77□□□□□ -0.37
SNRPA1-213ENST00000560856 EGR1P18146 543 aa12.77□□□□□ -0.37
SNRPA1-213ENST00000560856 PSMB10P40306 273 aa12.77□□□□□ -0.37
SNRPA1-213ENST00000560856 WDR38Q5JTN6 314 aa12.77□□□□□ -0.37
SNRPA1-213ENST00000560856 FDX2Q6P4F2 183 aa12.77□□□□□ -0.37
SNRPA1-213ENST00000560856 WDR82Q6UXN9 313 aa12.77□□□□□ -0.37
SNRPA1-213ENST00000560856 IL17RELQ6ZVW7 336 aa12.77□□□□□ -0.37
SNRPA1-213ENST00000560856 KCTD20Q7Z5Y7 419 aa12.77□□□□□ -0.37
SNRPA1-213ENST00000560856 ZDHHC23Q8IYP9 409 aa12.77□□□□□ -0.37
SNRPA1-213ENST00000560856 FTMTQ8N4E7 242 aa12.77□□□□□ -0.37
SNRPA1-213ENST00000560856 OR52I1Q8NGK6 324 aa12.77□□□□□ -0.37
SNRPA1-213ENST00000560856 CYGBQ8WWM9 190 aa12.77□□□□□ -0.37
SNRPA1-213ENST00000560856 RNPEPL1Q9HAU8 725 aa12.77□□□□□ -0.37
SNRPA1-213ENST00000560856 ABCB9Q9NP78 766 aa12.77□□□□□ -0.37
SNRPA1-213ENST00000560856 LPAR3Q9UBY5 353 aa12.77□□□□□ -0.37
SNRPA1-213ENST00000560856 GNG8Q9UK08 70 aa12.77□□□□□ -0.37
SNRPA1-213ENST00000560856 GTF2A1LQ9UNN4 478 aa12.77□□□□□ -0.37
SNRPA1-213ENST00000560856 PIGLQ9Y2B2 252 aa12.77□□□□□ -0.37
SNRPA1-213ENST00000560856 ATRQ13535 2644 aa12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 DOCK11Q5JSL3 2073 aa12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 A6NLC8 198 aa12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 ANXA2P2A6NMY6 339 aa12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 DHRS7CA6NNS2 312 aa12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 A8MXK9 166 aa12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 LGALS8O00214 317 aa12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 AVPP01185 164 aa12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 IRF2P14316 349 aa12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 CPT2P23786 658 aa12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 CD80P33681 288 aa12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 NANOS3P60323 173 aaKnown RBP12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 RAB40BQ12829 278 aa12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 GALEQ14376 348 aa12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 CEACAM21Q3KPI0 293 aa12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 DMRTC1Q5HYR2 192 aa12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 LAIR2Q6ISS4 152 aa12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 LYPD2Q6UXB3 125 aa12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 C1orf229Q6ZS94 237 aaPredicted RBP12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 DOK3Q7L591 496 aa12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 LHFPL3Q86UP9 236 aa12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 COMMD2Q86X83 199 aa12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 DEFB108BQ8NET1 73 aa12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 OR2G2Q8NGZ5 317 aa12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 CNIH3Q8TBE1 160 aa12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 NRG4Q8WWG1 115 aa12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 PELI1Q96FA3 418 aa12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 RNF170Q96K19 258 aa12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 ADI1Q9BV57 179 aa12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 RTL8AQ9BWD3 113 aa12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 BEX2Q9BXY8 128 aa12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 SHARPINQ9H0F6 387 aa12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 FGF20Q9NP95 211 aaPredicted RBP12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 ERVK13-1Q9NX77 482 aa12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 PCDHB10Q9UN67 800 aa12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 RPL36Q9Y3U8 105 aaKnown RBP12.76□□□□□ -0.37
SNRPA1-213ENST00000560856 PPIAL4CA0A0B4J2A2 164 aa12.75□□□□□ -0.37
SNRPA1-213ENST00000560856 TMEM210A6NLX4 147 aa12.75□□□□□ -0.37
SNRPA1-213ENST00000560856 H0YAE9 185 aa12.75□□□□□ -0.37
SNRPA1-213ENST00000560856 TRAPPC2LH3BP13 241 aa12.75□□□□□ -0.37
SNRPA1-213ENST00000560856 CDIPTO14735 213 aa12.75□□□□□ -0.37
SNRPA1-213ENST00000560856 MTRF1O75570 445 aaKnown RBP12.75□□□□□ -0.37
SNRPA1-213ENST00000560856 FADS2O95864 444 aaKnown RBP12.75□□□□□ -0.37
SNRPA1-213ENST00000560856 GNAO1P09471 354 aa12.75□□□□□ -0.37
SNRPA1-213ENST00000560856 FAM157CP0CG43 387 aa12.75□□□□□ -0.37
SNRPA1-213ENST00000560856 CAPGP40121 348 aa12.75□□□□□ -0.37
SNRPA1-213ENST00000560856 LCN2P80188 198 aa12.75□□□□□ -0.37
SNRPA1-213ENST00000560856 PAX2Q02962 417 aa12.75□□□□□ -0.37
SNRPA1-213ENST00000560856 SLC34A1Q06495 639 aa12.75□□□□□ -0.37
SNRPA1-213ENST00000560856 IL18R1Q13478 541 aa12.75□□□□□ -0.37
SNRPA1-213ENST00000560856 TEX36Q5VZQ5 186 aa12.75□□□□□ -0.37
SNRPA1-213ENST00000560856 SFRP4Q6FHJ7 346 aaPredicted RBP12.75□□□□□ -0.37
SNRPA1-213ENST00000560856 ZNF841Q6ZN19 808 aa12.75□□□□□ -0.37
SNRPA1-213ENST00000560856 EGFL6Q8IUX8 553 aa12.75□□□□□ -0.37
SNRPA1-213ENST00000560856 SCCPDHQ8NBX0 429 aa12.75□□□□□ -0.37
SNRPA1-213ENST00000560856 OR5A2Q8NGI9 324 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms