RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 NAA10P41227 235 aaPredicted RBP11.47□□□□□ -0.57
SMAD3-214ENST00000560402 RPS25P62851 125 aaKnown RBP11.47□□□□□ -0.57
SMAD3-214ENST00000560402 SCRN3Q0VDG4 424 aa11.47□□□□□ -0.57
SMAD3-214ENST00000560402 CCDC58Q4VC31 144 aa11.47□□□□□ -0.57
SMAD3-214ENST00000560402 TMEM255AQ5JRV8 349 aa11.47□□□□□ -0.57
SMAD3-214ENST00000560402 VASH1Q7L8A9 365 aaPredicted RBP11.47□□□□□ -0.57
SMAD3-214ENST00000560402 SPICQ8N5J4 248 aa11.47□□□□□ -0.57
SMAD3-214ENST00000560402 ZNF485Q8NCK3 441 aa11.47□□□□□ -0.57
SMAD3-214ENST00000560402 C4orf36Q96KX1 117 aa11.47□□□□□ -0.57
SMAD3-214ENST00000560402 POLE4Q9NR33 117 aa11.47□□□□□ -0.57
SMAD3-214ENST00000560402 TBCCD1Q9NVR7 557 aa11.47□□□□□ -0.57
SMAD3-214ENST00000560402 TXNL4BQ9NX01 149 aaKnown RBP11.47□□□□□ -0.57
SMAD3-214ENST00000560402 NPTNQ9Y639 398 aa11.47□□□□□ -0.57
SMAD3-214ENST00000560402 A0A075B6Q4 140 aa11.46□□□□□ -0.57
SMAD3-214ENST00000560402 A0A1W2PQL4 384 aaPredicted RBP11.46□□□□□ -0.57
SMAD3-214ENST00000560402 PRSS37A4D1T9 235 aa11.46□□□□□ -0.57
SMAD3-214ENST00000560402 ADRA2CP18825 462 aa11.46□□□□□ -0.57
SMAD3-214ENST00000560402 TNFRSF1AP19438 455 aa11.46□□□□□ -0.57
SMAD3-214ENST00000560402 CFL1P23528 166 aaKnown RBP11.46□□□□□ -0.57
SMAD3-214ENST00000560402 MYL9P24844 172 aa11.46□□□□□ -0.57
SMAD3-214ENST00000560402 FPR2P25090 351 aa11.46□□□□□ -0.57
SMAD3-214ENST00000560402 OPRL1P41146 370 aa11.46□□□□□ -0.57
SMAD3-214ENST00000560402 CDKN2AP42771 156 aaKnown RBP11.46□□□□□ -0.57
SMAD3-214ENST00000560402 BMXP51813 675 aa11.46□□□□□ -0.57
SMAD3-214ENST00000560402 TNFAIP6P98066 277 aaPredicted RBP11.46□□□□□ -0.57
SMAD3-214ENST00000560402 ENDOGQ14249 297 aaKnown RBP11.46□□□□□ -0.57
SMAD3-214ENST00000560402 CDONQ4KMG0 1287 aa11.46□□□□□ -0.57
SMAD3-214ENST00000560402 TMEM155Q4W5P6 130 aa11.46□□□□□ -0.57
SMAD3-214ENST00000560402 MESTQ5EB52 335 aa11.46□□□□□ -0.57
SMAD3-214ENST00000560402 SPANXN2Q5MJ10 180 aa11.46□□□□□ -0.57
SMAD3-214ENST00000560402 ZNF774Q6NX45 483 aa11.46□□□□□ -0.57
SMAD3-214ENST00000560402 CD200R1LQ6Q8B3 271 aa11.46□□□□□ -0.57
SMAD3-214ENST00000560402 SGMS2Q8NHU3 365 aa11.46□□□□□ -0.57
SMAD3-214ENST00000560402 TMEM203Q969S6 136 aa11.46□□□□□ -0.57
SMAD3-214ENST00000560402 INTS14Q96SY0 518 aa11.46□□□□□ -0.57
SMAD3-214ENST00000560402 DDOQ99489 341 aa11.46□□□□□ -0.57
SMAD3-214ENST00000560402 TMED9Q9BVK6 235 aa11.46□□□□□ -0.57
SMAD3-214ENST00000560402 NXF2Q9GZY0 626 aaKnown RBP11.46□□□□□ -0.57
SMAD3-214ENST00000560402 C7orf69Q9H7B7 122 aa11.46□□□□□ -0.57
SMAD3-214ENST00000560402 ZMAT3Q9HA38 289 aaKnown RBP11.46□□□□□ -0.57
SMAD3-214ENST00000560402 ATPIF1Q9UII2 106 aa11.46□□□□□ -0.57
SMAD3-214ENST00000560402 IFNL4K9M1U5 179 aa11.45□□□□□ -0.58
SMAD3-214ENST00000560402 DOK2O60496 412 aa11.45□□□□□ -0.58
SMAD3-214ENST00000560402 CDRT1O95170 752 aa11.45□□□□□ -0.58
SMAD3-214ENST00000560402 IGHV2-70P01814 119 aa11.45□□□□□ -0.58
SMAD3-214ENST00000560402 HLA-DQA2P01906 255 aa11.45□□□□□ -0.58
SMAD3-214ENST00000560402 KRT8P05787 483 aa11.45□□□□□ -0.58
SMAD3-214ENST00000560402 CD1AP06126 327 aa11.45□□□□□ -0.58
SMAD3-214ENST00000560402 KITLGP21583 273 aa11.45□□□□□ -0.58
SMAD3-214ENST00000560402 PYCR1P32322 319 aa11.45□□□□□ -0.58
SMAD3-214ENST00000560402 HTR5AP47898 357 aa11.45□□□□□ -0.58
SMAD3-214ENST00000560402 ZNF45Q02386 682 aa11.45□□□□□ -0.58
SMAD3-214ENST00000560402 ZNF85Q03923 595 aa11.45□□□□□ -0.58
SMAD3-214ENST00000560402 C22orf42Q6IC83 251 aa11.45□□□□□ -0.58
SMAD3-214ENST00000560402 RPL22L1Q6P5R6 122 aaKnown RBP11.45□□□□□ -0.58
SMAD3-214ENST00000560402 ZNF283Q8N7M2 679 aa11.45□□□□□ -0.58
SMAD3-214ENST00000560402 C3orf56Q8N813 242 aa11.45□□□□□ -0.58
SMAD3-214ENST00000560402 OR51L1Q8NGJ5 315 aa11.45□□□□□ -0.58
SMAD3-214ENST00000560402 ASB17Q8WXJ9 295 aa11.45□□□□□ -0.58
SMAD3-214ENST00000560402 THRSPQ92748 146 aa11.45□□□□□ -0.58
SMAD3-214ENST00000560402 SLC6A7Q99884 636 aa11.45□□□□□ -0.58
SMAD3-214ENST00000560402 ZNF649Q9BS31 505 aa11.45□□□□□ -0.58
SMAD3-214ENST00000560402 WDR76Q9H967 626 aa11.45□□□□□ -0.58
SMAD3-214ENST00000560402 SRA1Q9HD15 236 aaKnown RBP11.45□□□□□ -0.58
SMAD3-214ENST00000560402 TMEM106BQ9NUM4 274 aa11.45□□□□□ -0.58
SMAD3-214ENST00000560402 VSX1Q9NZR4 365 aaPredicted RBP11.45□□□□□ -0.58
SMAD3-214ENST00000560402 LAMP5Q9UJQ1 280 aa11.45□□□□□ -0.58
SMAD3-214ENST00000560402 GNG8Q9UK08 70 aa11.45□□□□□ -0.58
SMAD3-214ENST00000560402 ADAM30Q9UKF2 790 aa11.45□□□□□ -0.58
SMAD3-214ENST00000560402 POLR3KQ9Y2Y1 108 aaPredicted RBP11.45□□□□□ -0.58
SMAD3-214ENST00000560402 A8MXK9 166 aa11.44□□□□□ -0.58
SMAD3-214ENST00000560402 GABRPO00591 440 aa11.44□□□□□ -0.58
SMAD3-214ENST00000560402 SGCEO43556 437 aa11.44□□□□□ -0.58
SMAD3-214ENST00000560402 SPRY1O43609 319 aaPredicted RBP11.44□□□□□ -0.58
SMAD3-214ENST00000560402 ARL6IP5O75915 188 aa11.44□□□□□ -0.58
SMAD3-214ENST00000560402 NGFP01138 241 aa11.44□□□□□ -0.58
SMAD3-214ENST00000560402 CPT2P23786 658 aa11.44□□□□□ -0.58
SMAD3-214ENST00000560402 CD40LGP29965 261 aa11.44□□□□□ -0.58
SMAD3-214ENST00000560402 UBA52P62987 128 aaKnown RBP11.44□□□□□ -0.58
SMAD3-214ENST00000560402 LCN2P80188 198 aa11.44□□□□□ -0.58
SMAD3-214ENST00000560402 EGR3Q06889 387 aa11.44□□□□□ -0.58
SMAD3-214ENST00000560402 PSG7Q13046 419 aa11.44□□□□□ -0.58
SMAD3-214ENST00000560402 MZT2AQ6P582 158 aa11.44□□□□□ -0.58
SMAD3-214ENST00000560402 ZFP41Q8N8Y5 198 aa11.44□□□□□ -0.58
SMAD3-214ENST00000560402 ZNF454Q8N9F8 522 aa11.44□□□□□ -0.58
SMAD3-214ENST00000560402 OR6N2Q8NGY6 317 aa11.44□□□□□ -0.58
SMAD3-214ENST00000560402 PHYHIPQ92561 330 aa11.44□□□□□ -0.58
SMAD3-214ENST00000560402 SYT4Q9H2B2 425 aa11.44□□□□□ -0.58
SMAD3-214ENST00000560402 RERGLQ9H628 205 aa11.44□□□□□ -0.58
SMAD3-214ENST00000560402 ISG20L2Q9H9L3 353 aaKnown RBP11.44□□□□□ -0.58
SMAD3-214ENST00000560402 PATZ1Q9HBE1 687 aaKnown RBP11.44□□□□□ -0.58
SMAD3-214ENST00000560402 SMURF1Q9HCE7 757 aa11.44□□□□□ -0.58
SMAD3-214ENST00000560402 MSL2Q9HCI7 577 aa11.44□□□□□ -0.58
SMAD3-214ENST00000560402 AKIP1Q9NQ31 210 aa11.44□□□□□ -0.58
SMAD3-214ENST00000560402 SNTG1Q9NSN8 517 aa11.44□□□□□ -0.58
SMAD3-214ENST00000560402 IL19Q9UHD0 177 aa11.44□□□□□ -0.58
SMAD3-214ENST00000560402 OPN4Q9UHM6 478 aa11.44□□□□□ -0.58
SMAD3-214ENST00000560402 PURGQ9UJV8 347 aaKnown RBP11.44□□□□□ -0.58
SMAD3-214ENST00000560402 SF3B6Q9Y3B4 125 aaKnown RBP11.44□□□□□ -0.58
SMAD3-214ENST00000560402 ARHGAP32A7KAX9 2087 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms