RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 HAVCR1Q96D42 359 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 CMBLQ96DG6 245 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 ADAT3Q96EY9 351 aaPredicted RBP5.54□□□□□ -1.52
SPG11-221ENST00000560299 ZC3HAV1LQ96H79 300 aaKnown RBP5.54□□□□□ -1.52
SPG11-221ENST00000560299 WFIKKN1Q96NZ8 548 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 SORCS2Q96PQ0 1159 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 GPER1Q99527 375 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 S100A13Q99584 98 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 UQCC2Q9BRT2 126 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 PAPOLGQ9BWT3 736 aaKnown RBP5.54□□□□□ -1.52
SPG11-221ENST00000560299 OR2J1Q9GZK6 312 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 CHST5Q9GZS9 411 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 SLIRPQ9GZT3 109 aaKnown RBP5.54□□□□□ -1.52
SPG11-221ENST00000560299 C6orf62Q9GZU0 229 aaPredicted RBP5.54□□□□□ -1.52
SPG11-221ENST00000560299 PPIL3Q9H2H8 161 aaKnown RBP5.54□□□□□ -1.52
SPG11-221ENST00000560299 OR51B6Q9H340 312 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 NKIRAS2Q9NYR9 191 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 TAS2R4Q9NYW5 299 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 DAPK2Q9UIK4 370 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 GPR160Q9UJ42 338 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 POU2F3Q9UKI9 436 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 MPC1Q9Y5U8 109 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 LRBAP50851 2863 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 PKDREJQ9NTG1 2253 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 TRAV8-7A0A075B6U6 113 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.53□□□□□ -1.52
SPG11-221ENST00000560299 A6NIN4 97 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 IQCF6A8MYZ5 107 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 J3QL48 77 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 SLC17A2O00624 439 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 TIMM8AO60220 97 aaPredicted RBP5.53□□□□□ -1.52
SPG11-221ENST00000560299 GMDSO60547 372 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 CLDN1O95832 211 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 CST4P01036 141 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 CD3EP07766 207 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 CLEC2LP0C7M8 214 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 CALCBP10092 127 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 ACKR3P25106 362 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 CALCRP30988 508 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 TALDO1P37837 337 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 RBP2P50120 134 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 FUT6P51993 359 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 ATP1B3P54709 279 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 MTCP1P56278 107 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 SPOCK1Q08629 439 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 SNTB2Q13425 540 aaKnown RBP5.53□□□□□ -1.52
SPG11-221ENST00000560299 RIN1Q13671 783 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 HLXQ14774 488 aaPredicted RBP5.53□□□□□ -1.52
SPG11-221ENST00000560299 BEX5Q5H9J7 111 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 SPANXN2Q5MJ10 180 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 MBNL2Q5VZF2 373 aaKnown RBP5.53□□□□□ -1.52
SPG11-221ENST00000560299 PLCXD3Q63HM9 321 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 ZNF529Q6P280 563 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 LHFPL2Q6ZUX7 228 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 RFPL4BQ6ZWI9 263 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 MOB3CQ70IA8 216 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 LRRTM1Q86UE6 522 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 MYPOPQ86VE0 399 aaPredicted RBP5.53□□□□□ -1.52
SPG11-221ENST00000560299 DMRTC2Q8IXT2 367 aaPredicted RBP5.53□□□□□ -1.52
SPG11-221ENST00000560299 SPERTQ8NA61 448 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 DNAAF1Q8NEP3 725 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 NUP37Q8NFH4 326 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 OR56B2PQ8NGI1 322 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 OR6M1Q8NGM8 313 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 SYNPRQ8TBG9 265 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 SLC25A40Q8TBP6 338 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 KLF14Q8TD94 323 aaPredicted RBP5.53□□□□□ -1.52
SPG11-221ENST00000560299 FAM222BQ8WU58 562 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 PHF21AQ96BD5 680 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 ORAI1Q96D31 301 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 BORCS8Q96FH0 119 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 MARS2Q96GW9 593 aaKnown RBP5.53□□□□□ -1.52
SPG11-221ENST00000560299 CMTM3Q96MX0 182 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 MICU1Q9BPX6 476 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 SOX7Q9BT81 388 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 BARHL1Q9BZE3 327 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 NXF2Q9GZY0 626 aaKnown RBP5.53□□□□□ -1.52
SPG11-221ENST00000560299 METTL17Q9H7H0 456 aaPredicted RBP5.53□□□□□ -1.52
SPG11-221ENST00000560299 PCDHB16Q9NRJ7 776 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 NPAP1Q9NZP6 1156 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 MRPL15Q9P015 296 aaKnown RBP5.53□□□□□ -1.52
SPG11-221ENST00000560299 COMMD3Q9UBI1 195 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 GHRLQ9UBU3 117 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 STEAP1Q9UHE8 339 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 CMAHPQ9Y471 501 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 ATP23Q9Y6H3 246 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 PRR14LQ5THK1 2151 aa5.53□□□□□ -1.52
SPG11-221ENST00000560299 PLSCR5A0PG75 271 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 SHISA3A0PJX4 238 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 SMIM30A4D0T7 59 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 C5orf63A6NC05 138 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 OR5B21A6NL26 309 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 ZNF850A8MQ14 1090 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 FAM25AB3EWG3 89 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 FAM25CB3EWG5 89 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 FAM25GB3EWG6 89 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 ATP6V1G2-DDX39BF2Z307 99 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 ABCD4O14678 606 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 LMX1BO60663 402 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 NCR1O76036 304 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms