RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 SOD3P08294 240 aa7.98□□□□□ -1.13
HERC1-206ENST00000559996 CLEC2LP0C7M8 214 aa7.98□□□□□ -1.13
HERC1-206ENST00000559996 PRF1P14222 555 aa7.98□□□□□ -1.13
HERC1-206ENST00000559996 ZNF12P17014 697 aa7.98□□□□□ -1.13
HERC1-206ENST00000559996 FSTP19883 344 aa7.98□□□□□ -1.13
HERC1-206ENST00000559996 SERPINF1P36955 418 aa7.98□□□□□ -1.13
HERC1-206ENST00000559996 RBMXP38159 391 aaKnown RBP7.98□□□□□ -1.13
HERC1-206ENST00000559996 RPS19P39019 145 aaKnown RBP7.98□□□□□ -1.13
HERC1-206ENST00000559996 NCS1P62166 190 aa7.98□□□□□ -1.13
HERC1-206ENST00000559996 LSM3P62310 102 aaKnown RBP7.98□□□□□ -1.13
HERC1-206ENST00000559996 MAB21L1Q13394 359 aa7.98□□□□□ -1.13
HERC1-206ENST00000559996 SPCS2Q15005 226 aa7.98□□□□□ -1.13
HERC1-206ENST00000559996 EFNB3Q15768 340 aa7.98□□□□□ -1.13
HERC1-206ENST00000559996 FAM76BQ5HYJ3 339 aa7.98□□□□□ -1.13
HERC1-206ENST00000559996 UNQ6126/PRO20091Q6UXV3 157 aa7.98□□□□□ -1.13
HERC1-206ENST00000559996 WDR86Q86TI4 376 aa7.98□□□□□ -1.13
HERC1-206ENST00000559996 SERPINA12Q8IW75 414 aa7.98□□□□□ -1.13
HERC1-206ENST00000559996 C11orf53Q8IXP5 236 aa7.98□□□□□ -1.13
HERC1-206ENST00000559996 BHLHE23Q8NDY6 225 aa7.98□□□□□ -1.13
HERC1-206ENST00000559996 PIGCQ92535 297 aa7.98□□□□□ -1.13
HERC1-206ENST00000559996 PIGTQ969N2 578 aa7.98□□□□□ -1.13
HERC1-206ENST00000559996 ISOC1Q96CN7 298 aa7.98□□□□□ -1.13
HERC1-206ENST00000559996 MSL2Q9HCI7 577 aa7.98□□□□□ -1.13
HERC1-206ENST00000559996 TAS2R4Q9NYW5 299 aa7.98□□□□□ -1.13
HERC1-206ENST00000559996 MRPL15Q9P015 296 aaKnown RBP7.98□□□□□ -1.13
HERC1-206ENST00000559996 TAAR3PQ9P1P4 343 aa7.98□□□□□ -1.13
HERC1-206ENST00000559996 PLEKHB1Q9UF11 243 aaPredicted RBP7.98□□□□□ -1.13
HERC1-206ENST00000559996 DUSP13Q9UII6 198 aa7.98□□□□□ -1.13
HERC1-206ENST00000559996 GPR160Q9UJ42 338 aa7.98□□□□□ -1.13
HERC1-206ENST00000559996 SSR3Q9UNL2 185 aa7.98□□□□□ -1.13
HERC1-206ENST00000559996 NBPF19A0A087WUL8 3843 aa7.98□□□□□ -1.13
HERC1-206ENST00000559996 LOC100506127A0A0U1RQW1 187 aa7.97□□□□□ -1.13
HERC1-206ENST00000559996 LOC100996750A0A140TA64 210 aa7.97□□□□□ -1.13
HERC1-206ENST00000559996 H3BMQ9 156 aa7.97□□□□□ -1.13
HERC1-206ENST00000559996 NRASP01111 189 aa7.97□□□□□ -1.13
HERC1-206ENST00000559996 ALDOBP05062 364 aa7.97□□□□□ -1.13
HERC1-206ENST00000559996 ADH4P08319 380 aa7.97□□□□□ -1.13
HERC1-206ENST00000559996 SELEP16581 610 aa7.97□□□□□ -1.13
HERC1-206ENST00000559996 ATF1P18846 271 aa7.97□□□□□ -1.13
HERC1-206ENST00000559996 CA6P23280 308 aa7.97□□□□□ -1.13
HERC1-206ENST00000559996 GCH1P30793 250 aa7.97□□□□□ -1.13
HERC1-206ENST00000559996 SDC2P34741 201 aa7.97□□□□□ -1.13
HERC1-206ENST00000559996 THBS2P35442 1172 aa7.97□□□□□ -1.13
HERC1-206ENST00000559996 ALDH3B1P43353 468 aa7.97□□□□□ -1.13
HERC1-206ENST00000559996 KLF3P57682 345 aaPredicted RBP7.97□□□□□ -1.13
HERC1-206ENST00000559996 RPS23P62266 143 aaKnown RBP7.97□□□□□ -1.13
HERC1-206ENST00000559996 TLE4Q04727 773 aa7.97□□□□□ -1.13
HERC1-206ENST00000559996 PRDX4Q13162 271 aa7.97□□□□□ -1.13
HERC1-206ENST00000559996 CEACAM21Q3KPI0 293 aa7.97□□□□□ -1.13
HERC1-206ENST00000559996 CLVS2Q5SYC1 327 aa7.97□□□□□ -1.13
HERC1-206ENST00000559996 FAM166AQ6J272 317 aa7.97□□□□□ -1.13
HERC1-206ENST00000559996 DTX2Q86UW9 622 aa7.97□□□□□ -1.13
HERC1-206ENST00000559996 COMMD2Q86X83 199 aa7.97□□□□□ -1.13
HERC1-206ENST00000559996 ZCCHC24Q8N2G6 241 aaKnown RBP7.97□□□□□ -1.13
HERC1-206ENST00000559996 ZNF611Q8N823 705 aa7.97□□□□□ -1.13
HERC1-206ENST00000559996 CSNK2A3Q8NEV1 391 aa7.97□□□□□ -1.13
HERC1-206ENST00000559996 OR1M1Q8NGA1 313 aa7.97□□□□□ -1.13
HERC1-206ENST00000559996 OR5D14Q8NGL3 314 aa7.97□□□□□ -1.13
HERC1-206ENST00000559996 ZNF420Q8TAQ5 688 aaPredicted RBP7.97□□□□□ -1.13
HERC1-206ENST00000559996 TSEN15Q8WW01 171 aaKnown RBP7.97□□□□□ -1.13
HERC1-206ENST00000559996 PP6455Q8WZ26 134 aa7.97□□□□□ -1.13
HERC1-206ENST00000559996 OR5P3Q8WZ94 311 aa7.97□□□□□ -1.13
HERC1-206ENST00000559996 DVL3Q92997 716 aaPredicted RBP7.97□□□□□ -1.13
HERC1-206ENST00000559996 C12orf43Q96C57 262 aaKnown RBP7.97□□□□□ -1.13
HERC1-206ENST00000559996 C14orf79Q96F83 325 aa7.97□□□□□ -1.13
HERC1-206ENST00000559996 KRTAP4-6Q9BYQ5 205 aa7.97□□□□□ -1.13
HERC1-206ENST00000559996 EXOSC4Q9NPD3 245 aaKnown RBP7.97□□□□□ -1.13
HERC1-206ENST00000559996 GPR173Q9NS66 373 aa7.97□□□□□ -1.13
HERC1-206ENST00000559996 POU2F3Q9UKI9 436 aa7.97□□□□□ -1.13
HERC1-206ENST00000559996 FBN2P35556 2912 aa7.96□□□□□ -1.13
HERC1-206ENST00000559996 SMIM31A0A1B0GVY4 71 aa7.96□□□□□ -1.14
HERC1-206ENST00000559996 PQLC2LA1A4F0 135 aa7.96□□□□□ -1.14
HERC1-206ENST00000559996 B9A039 149 aa7.96□□□□□ -1.14
HERC1-206ENST00000559996 ZNF701M0R085 212 aaPredicted RBP7.96□□□□□ -1.14
HERC1-206ENST00000559996 PTBP3O95758 552 aaKnown RBP7.96□□□□□ -1.14
HERC1-206ENST00000559996 IGHV1-46P01743 117 aa7.96□□□□□ -1.14
HERC1-206ENST00000559996 MAS1P04201 325 aa7.96□□□□□ -1.14
HERC1-206ENST00000559996 COX6B1P14854 86 aa7.96□□□□□ -1.14
HERC1-206ENST00000559996 MAPK3P27361 379 aaPredicted RBP7.96□□□□□ -1.14
HERC1-206ENST00000559996 CALRP27797 417 aaKnown RBP7.96□□□□□ -1.14
HERC1-206ENST00000559996 PMELP40967 661 aa7.96□□□□□ -1.14
HERC1-206ENST00000559996 MTNR1BP49286 362 aa7.96□□□□□ -1.14
HERC1-206ENST00000559996 CAV3P56539 151 aa7.96□□□□□ -1.14
HERC1-206ENST00000559996 OR10A3P58181 314 aa7.96□□□□□ -1.14
HERC1-206ENST00000559996 KRTAP10-9P60411 292 aa7.96□□□□□ -1.14
HERC1-206ENST00000559996 HNRNPA0Q13151 305 aaKnown RBP7.96□□□□□ -1.14
HERC1-206ENST00000559996 TUSC1Q2TAM9 212 aa7.96□□□□□ -1.14
HERC1-206ENST00000559996 HSD17B12Q53GQ0 312 aa7.96□□□□□ -1.14
HERC1-206ENST00000559996 PAMR1Q6UXH9 720 aa7.96□□□□□ -1.14
HERC1-206ENST00000559996 MOB3CQ70IA8 216 aa7.96□□□□□ -1.14
HERC1-206ENST00000559996 MUC15Q8N387 334 aa7.96□□□□□ -1.14
HERC1-206ENST00000559996 OR52N4Q8NGI2 321 aa7.96□□□□□ -1.14
HERC1-206ENST00000559996 OR13C9Q8NGT0 318 aa7.96□□□□□ -1.14
HERC1-206ENST00000559996 NDNFQ8TB73 568 aa7.96□□□□□ -1.14
HERC1-206ENST00000559996 RAB2BQ8WUD1 216 aa7.96□□□□□ -1.14
HERC1-206ENST00000559996 FBXW5Q969U6 566 aa7.96□□□□□ -1.14
HERC1-206ENST00000559996 SLC25A28Q96A46 364 aa7.96□□□□□ -1.14
HERC1-206ENST00000559996 DGCR14Q96DF8 476 aaKnown RBP7.96□□□□□ -1.14
HERC1-206ENST00000559996 KCTD7Q96MP8 289 aa7.96□□□□□ -1.14
HERC1-206ENST00000559996 NKX3-1Q99801 234 aaPredicted RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms