RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 ANOS1P23352 680 aa7.51□□□□□ -1.21
HDDC3-204ENST00000559834 SAA4P35542 130 aa7.51□□□□□ -1.21
HDDC3-204ENST00000559834 KIR2DS4P43632 304 aa7.51□□□□□ -1.21
HDDC3-204ENST00000559834 CAV3P56539 151 aa7.51□□□□□ -1.21
HDDC3-204ENST00000559834 CSNK2BP67870 215 aa7.51□□□□□ -1.21
HDDC3-204ENST00000559834 CRMP1Q14194 572 aa7.51□□□□□ -1.21
HDDC3-204ENST00000559834 SPATS1Q496A3 300 aa7.51□□□□□ -1.21
HDDC3-204ENST00000559834 STUMQ69YW2 141 aa7.51□□□□□ -1.21
HDDC3-204ENST00000559834 DUX4L9Q6RFH8 374 aaPredicted RBP7.51□□□□□ -1.21
HDDC3-204ENST00000559834 ZNF788Q6ZQV5 615 aa7.51□□□□□ -1.21
HDDC3-204ENST00000559834 KCTD8Q6ZWB6 473 aa7.51□□□□□ -1.21
HDDC3-204ENST00000559834 WDR86Q86TI4 376 aa7.51□□□□□ -1.21
HDDC3-204ENST00000559834 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.51□□□□□ -1.21
HDDC3-204ENST00000559834 FGFRL1Q8N441 504 aa7.51□□□□□ -1.21
HDDC3-204ENST00000559834 Q8N7P7 452 aa7.51□□□□□ -1.21
HDDC3-204ENST00000559834 BEND2Q8NDZ0 799 aa7.51□□□□□ -1.21
HDDC3-204ENST00000559834 OR2T33Q8NG76 320 aa7.51□□□□□ -1.21
HDDC3-204ENST00000559834 OR51G2Q8NGK0 314 aa7.51□□□□□ -1.21
HDDC3-204ENST00000559834 OR5D13Q8NGL4 314 aa7.51□□□□□ -1.21
HDDC3-204ENST00000559834 TNFRSF14Q92956 283 aa7.51□□□□□ -1.21
HDDC3-204ENST00000559834 SEH1LQ96EE3 360 aa7.51□□□□□ -1.21
HDDC3-204ENST00000559834 PGAM5Q96HS1 289 aa7.51□□□□□ -1.21
HDDC3-204ENST00000559834 RNF170Q96K19 258 aa7.51□□□□□ -1.21
HDDC3-204ENST00000559834 RAB3IPQ96QF0 476 aaPredicted RBP7.51□□□□□ -1.21
HDDC3-204ENST00000559834 INTS14Q96SY0 518 aa7.51□□□□□ -1.21
HDDC3-204ENST00000559834 CDRT15Q96T59 188 aa7.51□□□□□ -1.21
HDDC3-204ENST00000559834 SSX3Q99909 188 aa7.51□□□□□ -1.21
HDDC3-204ENST00000559834 ELAC2Q9BQ52 826 aaKnown RBP7.51□□□□□ -1.21
HDDC3-204ENST00000559834 ABHD6Q9BV23 337 aa7.51□□□□□ -1.21
HDDC3-204ENST00000559834 NMNAT2Q9BZQ4 307 aa7.51□□□□□ -1.21
HDDC3-204ENST00000559834 MYLK2Q9H1R3 596 aa7.51□□□□□ -1.21
HDDC3-204ENST00000559834 SNTG1Q9NSN8 517 aa7.51□□□□□ -1.21
HDDC3-204ENST00000559834 DUX4Q9UBX2 424 aa7.51□□□□□ -1.21
HDDC3-204ENST00000559834 RHBDD3Q9Y3P4 386 aa7.51□□□□□ -1.21
HDDC3-204ENST00000559834 TGP01266 2768 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 TRRAPQ9Y4A5 3859 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 A0A1W2PPH5 198 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 H0YAE9 185 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 H3BUX3 64 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 ARPC2O15144 300 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 SIGLEC5O15389 551 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 GLCEO94923 617 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 CST4P01036 141 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 ACAA1P09110 424 aaPredicted RBP7.5□□□□□ -1.21
HDDC3-204ENST00000559834 H2BFMP0C1H6 154 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 PSKH1P11801 424 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 ZNF3P17036 446 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 AMY2BP19961 511 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 GSTT1P30711 240 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 MSX2P35548 267 aaPredicted RBP7.5□□□□□ -1.21
HDDC3-204ENST00000559834 GABRA2P47869 451 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 ZNF121P58317 390 aaPredicted RBP7.5□□□□□ -1.21
HDDC3-204ENST00000559834 GMFBP60983 142 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 ELF3P78545 371 aaPredicted RBP7.5□□□□□ -1.21
HDDC3-204ENST00000559834 PRB3Q04118 309 aaPredicted RBP7.5□□□□□ -1.21
HDDC3-204ENST00000559834 AANATQ16613 207 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 GFOD2Q3B7J2 385 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 FAM76BQ5HYJ3 339 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 PRSS45Q7RTY3 260 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 REC114Q7Z4M0 266 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 ERI1Q8IV48 349 aaKnown RBP7.5□□□□□ -1.21
HDDC3-204ENST00000559834 PGAM4Q8N0Y7 254 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 OR9Q2Q8NGE9 314 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 OR4C13Q8NGP0 309 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 OR6N2Q8NGY6 317 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 OR2T6Q8NHC8 308 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 ANGPTL6Q8NI99 470 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 ZNF671Q8TAW3 534 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 RNF133Q8WVZ7 376 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 OR5P3Q8WZ94 311 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 PIGCQ92535 297 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 ITFG2Q969R8 447 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 PPP1R14AQ96A00 147 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 ITPKCQ96DU7 683 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 DUS3LQ96G46 650 aaKnown RBP7.5□□□□□ -1.21
HDDC3-204ENST00000559834 BTBD10Q9BSF8 475 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 MEGF9Q9H1U4 602 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 BRD7Q9NPI1 651 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 NDE1Q9NXR1 346 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 DNAJC27Q9NZQ0 273 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 NLKQ9UBE8 527 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 MAB21L2Q9Y586 359 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 LYVE1Q9Y5Y7 322 aa7.5□□□□□ -1.21
HDDC3-204ENST00000559834 NOTCH1P46531 2555 aa7.49□□□□□ -1.21
HDDC3-204ENST00000559834 TRBV23-1A0A0A0MS06 115 aa7.49□□□□□ -1.21
HDDC3-204ENST00000559834 hCG_1809904A0A1W2PP81 198 aa7.49□□□□□ -1.21
HDDC3-204ENST00000559834 A0A1W2PPE2 198 aa7.49□□□□□ -1.21
HDDC3-204ENST00000559834 A0A1W2PR64 198 aa7.49□□□□□ -1.21
HDDC3-204ENST00000559834 A0A1W2PRV1 198 aa7.49□□□□□ -1.21
HDDC3-204ENST00000559834 OR2AT4A6NND4 320 aa7.49□□□□□ -1.21
HDDC3-204ENST00000559834 ZNF850A8MQ14 1090 aa7.49□□□□□ -1.21
HDDC3-204ENST00000559834 AKR7A2O43488 359 aa7.49□□□□□ -1.21
HDDC3-204ENST00000559834 CLUP10909 449 aa7.49□□□□□ -1.21
HDDC3-204ENST00000559834 PAICSP22234 425 aaKnown RBP7.49□□□□□ -1.21
HDDC3-204ENST00000559834 GLRA1P23415 457 aa7.49□□□□□ -1.21
HDDC3-204ENST00000559834 OPRL1P41146 370 aa7.49□□□□□ -1.21
HDDC3-204ENST00000559834 EMX1Q04741 257 aaPredicted RBP7.49□□□□□ -1.21
HDDC3-204ENST00000559834 PRDX4Q13162 271 aa7.49□□□□□ -1.21
HDDC3-204ENST00000559834 KLRD1Q13241 179 aa7.49□□□□□ -1.21
HDDC3-204ENST00000559834 DGUOKQ16854 277 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms