RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 CDH24Q86UP0 819 aa10.97□□□□□ -0.65
USP3-213ENST00000559711 CD163Q86VB7 1156 aa10.97□□□□□ -0.65
USP3-213ENST00000559711 ZNF610Q8N9Z0 462 aa10.97□□□□□ -0.65
USP3-213ENST00000559711 TMEM104Q8NE00 496 aa10.97□□□□□ -0.65
USP3-213ENST00000559711 SLC30A7Q8NEW0 376 aa10.97□□□□□ -0.65
USP3-213ENST00000559711 GPX8Q8TED1 209 aa10.97□□□□□ -0.65
USP3-213ENST00000559711 NPRL2Q8WTW4 380 aa10.97□□□□□ -0.65
USP3-213ENST00000559711 CPNE2Q96FN4 548 aaPredicted RBP10.97□□□□□ -0.65
USP3-213ENST00000559711 TECTBQ96PL2 329 aa10.97□□□□□ -0.65
USP3-213ENST00000559711 LPAR5Q9H1C0 372 aa10.97□□□□□ -0.65
USP3-213ENST00000559711 SCPEP1Q9HB40 452 aa10.97□□□□□ -0.65
USP3-213ENST00000559711 ZNF71Q9NQZ8 489 aaPredicted RBP10.97□□□□□ -0.65
USP3-213ENST00000559711 NAP1L6A6NFF2 107 aa10.96□□□□□ -0.65
USP3-213ENST00000559711 WIPF3A6NGB9 483 aa10.96□□□□□ -0.65
USP3-213ENST00000559711 J3QW42 95 aa10.96□□□□□ -0.65
USP3-213ENST00000559711 ICMTO60725 284 aa10.96□□□□□ -0.65
USP3-213ENST00000559711 CDC14BO60729 498 aa10.96□□□□□ -0.65
USP3-213ENST00000559711 IL2RAP01589 272 aa10.96□□□□□ -0.65
USP3-213ENST00000559711 MELTFP08582 738 aa10.96□□□□□ -0.65
USP3-213ENST00000559711 CEACAM8P31997 349 aaPredicted RBP10.96□□□□□ -0.65
USP3-213ENST00000559711 WNT5AP41221 380 aa10.96□□□□□ -0.65
USP3-213ENST00000559711 MTCP1P56278 107 aa10.96□□□□□ -0.65
USP3-213ENST00000559711 PRSS12P56730 875 aa10.96□□□□□ -0.65
USP3-213ENST00000559711 ZP1P60852 638 aa10.96□□□□□ -0.65
USP3-213ENST00000559711 P2RY6Q15077 328 aa10.96□□□□□ -0.65
USP3-213ENST00000559711 ZNF260Q3ZCT1 412 aa10.96□□□□□ -0.65
USP3-213ENST00000559711 AGAP6Q5VW22 663 aa10.96□□□□□ -0.65
USP3-213ENST00000559711 C1QL2Q7Z5L3 287 aa10.96□□□□□ -0.65
USP3-213ENST00000559711 GLCCI1Q86VQ1 547 aa10.96□□□□□ -0.65
USP3-213ENST00000559711 CISD2Q8N5K1 135 aaKnown RBP10.96□□□□□ -0.65
USP3-213ENST00000559711 WDR31Q8NA23 367 aa10.96□□□□□ -0.65
USP3-213ENST00000559711 AQP3Q92482 292 aa10.96□□□□□ -0.65
USP3-213ENST00000559711 PIGTQ969N2 578 aa10.96□□□□□ -0.65
USP3-213ENST00000559711 CREB3L1Q96BA8 519 aa10.96□□□□□ -0.65
USP3-213ENST00000559711 SEH1LQ96EE3 360 aa10.96□□□□□ -0.65
USP3-213ENST00000559711 HRASLSQ9HDD0 168 aa10.96□□□□□ -0.65
USP3-213ENST00000559711 TAS2R8Q9NYW2 309 aa10.96□□□□□ -0.65
USP3-213ENST00000559711 NPAP1Q9NZP6 1156 aa10.96□□□□□ -0.65
USP3-213ENST00000559711 KCNN3Q9UGI6 736 aa10.96□□□□□ -0.65
USP3-213ENST00000559711 TUBD1Q9UJT1 453 aa10.96□□□□□ -0.65
USP3-213ENST00000559711 PIEZO1Q92508 2521 aa10.96□□□□□ -0.66
USP3-213ENST00000559711 CBR1P16152 277 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 RBP2P50120 134 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 FUT6P51993 359 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 TBC1D28Q2M2D7 210 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 LINC00303Q3SY05 128 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 OLFML2AQ68BL7 652 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 ASCL4Q6XD76 172 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 BEND4Q6ZU67 534 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 LHFPL2Q6ZUX7 228 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 C17orf78Q8N4C9 275 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 FAM89BQ8N5H3 189 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 ACBD4Q8NC06 268 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 NAXEQ8NCW5 288 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 OR5L1Q8NGL2 311 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 OR10R2Q8NGX6 335 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 TNFAIP8L1Q8WVP5 186 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 UPRTQ96BW1 309 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 WBP1Q96G27 269 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 GAL3ST1Q99999 423 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 SLX1AQ9BQ83 275 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 CACNG6Q9BXT2 260 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 CST11Q9H112 138 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 OPN3Q9H1Y3 402 aaPredicted RBP10.95□□□□□ -0.66
USP3-213ENST00000559711 DPAGT1Q9H3H5 408 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 COPZ2Q9P299 210 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 SPENQ96T58 3664 aaKnown RBP10.95□□□□□ -0.66
USP3-213ENST00000559711 PTPRQQ9UMZ3 2332 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 IGKV1-27A0A075B6S5 117 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 A0A0A6YYD4 124 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 MPIG6BO95866 241 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 CST4P01036 141 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 LPLP06858 475 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 VEGFCP49767 419 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 BTG1P62324 171 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 RPS27AP62979 156 aaKnown RBP10.95□□□□□ -0.66
USP3-213ENST00000559711 CXADRP78310 365 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 GUCA2AQ02747 115 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 HLXQ14774 488 aaPredicted RBP10.95□□□□□ -0.66
USP3-213ENST00000559711 CDNFQ49AH0 187 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 SLC22A6Q4U2R8 563 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 MRPL21Q7Z2W9 205 aaKnown RBP10.95□□□□□ -0.66
USP3-213ENST00000559711 CXorf67Q86X51 503 aaPredicted RBP10.95□□□□□ -0.66
USP3-213ENST00000559711 RPRMLQ8N4K4 120 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 CSNK2A3Q8NEV1 391 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 OR56B2PQ8NGI1 322 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 OR5D18Q8NGL1 313 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 PIGCQ92535 297 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 BORCS8Q96FH0 119 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 URM1Q9BTM9 101 aaKnown RBP10.95□□□□□ -0.66
USP3-213ENST00000559711 TMEM59Q9BXS4 323 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 OBP2BQ9NPH6 170 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 PTTG3PQ9NZH4 202 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 MRPL15Q9P015 296 aaKnown RBP10.95□□□□□ -0.66
USP3-213ENST00000559711 ING4Q9UNL4 249 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 SLC7A11Q9UPY5 501 aa10.95□□□□□ -0.66
USP3-213ENST00000559711 A0A0B4J293 547 aa10.94□□□□□ -0.66
USP3-213ENST00000559711 A0A1W2PP11 408 aa10.94□□□□□ -0.66
USP3-213ENST00000559711 CRTAPO75718 401 aaPredicted RBP10.94□□□□□ -0.66
USP3-213ENST00000559711 IGKV3-15P01624 115 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms