RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 HOXA1P49639 335 aaPredicted RBP6.38□□□□□ -1.39
USP3-210ENST00000559192 HIST1H3AP68431 136 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 HBG1P69891 147 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 HBG2P69892 147 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 BAXQ07812 192 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 MALLQ13021 153 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 TMEM128Q5BJH2 165 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 RPL7L1Q6DKI1 246 aaKnown RBP6.38□□□□□ -1.39
USP3-210ENST00000559192 PUSL1Q8N0Z8 303 aaKnown RBP6.38□□□□□ -1.39
USP3-210ENST00000559192 TCTEX1D1Q8N7M0 179 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 SPPL3Q8TCT6 385 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 IL1F10Q8WWZ1 152 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 PHYHIPLQ96FC7 376 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 IER2Q9BTL4 223 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 OR51B6Q9H340 312 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 GPR84Q9NQS5 396 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 LIN7CQ9NUP9 197 aaKnown RBP6.38□□□□□ -1.39
USP3-210ENST00000559192 NECAP2Q9NVZ3 263 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 KLK13Q9UKR3 277 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 CLEC3BP05452 202 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 SULT1A2P50226 295 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 MESP2Q0VG99 397 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 IKZF1Q13422 519 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 CNN3Q15417 329 aaKnown RBP6.38□□□□□ -1.39
USP3-210ENST00000559192 C2orf68Q2NKX9 166 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 TMEM176BQ3YBM2 270 aaPredicted RBP6.38□□□□□ -1.39
USP3-210ENST00000559192 VWA2Q5GFL6 755 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 C19orf35Q6ZS72 473 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 MAML2Q8IZL2 1156 aaPredicted RBP6.38□□□□□ -1.39
USP3-210ENST00000559192 PRSS35Q8N3Z0 413 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 TMEM52Q8NDY8 209 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 OR5AP2Q8NGF4 316 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 OR52N4Q8NGI2 321 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 OR13C8Q8NGS7 320 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 STT3BQ8TCJ2 826 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 ZNF764Q96H86 408 aaPredicted RBP6.38□□□□□ -1.39
USP3-210ENST00000559192 ZCCHC4Q9H5U6 513 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 SRCAPQ6ZRS2 3230 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 NINQ8N4C6 2090 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 LOC285556D6RIA3 1793 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 A0A0G2JK05 382 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 SHISA8B8ZZ34 492 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 IL33O95760 270 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 CXCL10P02778 98 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 ARG1P05089 322 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 CHRM2P08172 466 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 ICAM2P13598 275 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 PRAMEF20Q5VT98 475 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 CBLN3Q6UW01 205 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 H1FNTQ75WM6 255 aaPredicted RBP6.38□□□□□ -1.39
USP3-210ENST00000559192 GPR137CQ8N3F9 429 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 OR1J1Q8NGS3 322 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 OR2A5Q96R48 311 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 LAT2Q9GZY6 243 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 PCED1AQ9H1Q7 454 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 TXNIPQ9H3M7 391 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 C19orf25Q9UFG5 118 aaPredicted RBP6.38□□□□□ -1.39
USP3-210ENST00000559192 TNFSF18Q9UNG2 199 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 TP53I11O14683 189 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 PIN1P1O15428 100 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 NGFRP08138 427 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 OPRM1P35372 400 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 ZNF117Q03924 483 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 ZNF528Q3MIS6 628 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 ZDHHC22Q8N966 263 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 MSI2Q96DH6 328 aaKnown RBP6.37□□□□□ -1.39
USP3-210ENST00000559192 SEH1LQ96EE3 360 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 SOSTQ9BQB4 213 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 NAA11Q9BSU3 229 aaPredicted RBP6.37□□□□□ -1.39
USP3-210ENST00000559192 PLK3Q9H4B4 646 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 RAB18Q9NP72 206 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 CTSFQ9UBX1 484 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 PLRG1O43660 514 aaKnown RBP6.37□□□□□ -1.39
USP3-210ENST00000559192 SSSCA1O60232 199 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 EML2O95834 649 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 CD37P11049 281 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 RBP2P50120 134 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 DCAF7P61962 342 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 RPS15P62841 145 aaKnown RBP6.37□□□□□ -1.39
USP3-210ENST00000559192 SP6Q3SY56 376 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 TMEM268Q5VZI3 342 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 RTL6Q6ICC9 239 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 Q6ZN92 141 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 DGAT2L6Q6ZPD8 337 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 GRINAQ7Z429 371 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 LDLRAD3Q86YD5 345 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 ZNF573Q86YE8 665 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 ZNF383Q8NA42 475 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 KISS1RQ969F8 398 aaPredicted RBP6.37□□□□□ -1.39
USP3-210ENST00000559192 SLC17A5Q9NRA2 495 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 FGF2P09038 288 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 ACAA1P09110 424 aaPredicted RBP6.37□□□□□ -1.39
USP3-210ENST00000559192 PMCHP20382 165 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 OR3A4PP47883 348 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 FAM109BQ6ICB4 259 aaPredicted RBP6.37□□□□□ -1.39
USP3-210ENST00000559192 PARM1Q6UWI2 310 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 C11orf42Q8N5U0 333 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 OR5L2Q8NGL0 311 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 ARHGAP5-AS1Q96IT6 56 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 MS4A10Q96PG2 267 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms