RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 ZNF420Q8TAQ5 688 aaPredicted RBP10.55□□□□□ -0.72
GABPB1-208ENST00000558970 OR14A2Q96R54 314 aa10.55□□□□□ -0.72
GABPB1-208ENST00000558970 BEX4Q9NWD9 120 aaPredicted RBP10.55□□□□□ -0.72
GABPB1-208ENST00000558970 USF3Q68DE3 2245 aa10.55□□□□□ -0.72
GABPB1-208ENST00000558970 AKAP9Q99996 3911 aa10.54□□□□□ -0.72
GABPB1-208ENST00000558970 A0A087WXM4 84 aa10.54□□□□□ -0.72
GABPB1-208ENST00000558970 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.54□□□□□ -0.72
GABPB1-208ENST00000558970 FAM230AA0A1W2PPH8 454 aa10.54□□□□□ -0.72
GABPB1-208ENST00000558970 LOC390937A0A1W2PQ73 354 aa10.54□□□□□ -0.72
GABPB1-208ENST00000558970 A6NLC8 198 aa10.54□□□□□ -0.72
GABPB1-208ENST00000558970 ANXA2P2A6NMY6 339 aa10.54□□□□□ -0.72
GABPB1-208ENST00000558970 PLPP2O43688 288 aa10.54□□□□□ -0.72
GABPB1-208ENST00000558970 MRPS14O60783 128 aaKnown RBP10.54□□□□□ -0.72
GABPB1-208ENST00000558970 OCMP0CE72 109 aaPredicted RBP10.54□□□□□ -0.72
GABPB1-208ENST00000558970 DAOP14920 347 aa10.54□□□□□ -0.72
GABPB1-208ENST00000558970 GPM6AP51674 278 aa10.54□□□□□ -0.72
GABPB1-208ENST00000558970 ART1P52961 327 aa10.54□□□□□ -0.72
GABPB1-208ENST00000558970 ACSM1Q08AH1 577 aa10.54□□□□□ -0.72
GABPB1-208ENST00000558970 MLLT11Q13015 90 aaPredicted RBP10.54□□□□□ -0.72
GABPB1-208ENST00000558970 PCGF3Q3KNV8 242 aa10.54□□□□□ -0.72
GABPB1-208ENST00000558970 CLVS2Q5SYC1 327 aa10.54□□□□□ -0.72
GABPB1-208ENST00000558970 MOGAT3Q86VF5 341 aa10.54□□□□□ -0.72
GABPB1-208ENST00000558970 EGFL6Q8IUX8 553 aa10.54□□□□□ -0.72
GABPB1-208ENST00000558970 OR13C9Q8NGT0 318 aa10.54□□□□□ -0.72
GABPB1-208ENST00000558970 RPS4Y2Q8TD47 263 aa10.54□□□□□ -0.72
GABPB1-208ENST00000558970 GPR148Q8TDV2 347 aa10.54□□□□□ -0.72
GABPB1-208ENST00000558970 UBASH3BQ8TF42 649 aa10.54□□□□□ -0.72
GABPB1-208ENST00000558970 HPSE2Q8WWQ2 592 aa10.54□□□□□ -0.72
GABPB1-208ENST00000558970 NINJ1Q92982 152 aa10.54□□□□□ -0.72
GABPB1-208ENST00000558970 MEGF10Q96KG7 1140 aa10.54□□□□□ -0.72
GABPB1-208ENST00000558970 NR1H4Q96RI1 486 aaPredicted RBP10.54□□□□□ -0.72
GABPB1-208ENST00000558970 EGLN1Q9GZT9 426 aa10.54□□□□□ -0.72
GABPB1-208ENST00000558970 ZNF696Q9H7X3 374 aa10.54□□□□□ -0.72
GABPB1-208ENST00000558970 ZNF275Q9NSD4 429 aaPredicted RBP10.54□□□□□ -0.72
GABPB1-208ENST00000558970 FBXO9Q9UK97 447 aaPredicted RBP10.54□□□□□ -0.72
GABPB1-208ENST00000558970 LOC100289279A0A1B0GTE1 492 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 hCG_1807616A0A1W2PRN6 198 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 TRIM64A6NGJ6 449 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 GMDSO60547 372 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 F12P00748 615 aaPredicted RBP10.53□□□□□ -0.72
GABPB1-208ENST00000558970 PLATP00750 562 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 CST4P01036 141 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 ZNF12P17014 697 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 COL8A2P25067 703 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 THBS2P35442 1172 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 SRP9P49458 86 aaKnown RBP10.53□□□□□ -0.72
GABPB1-208ENST00000558970 EFNA4P52798 201 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 GMFBP60983 142 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 RPS11P62280 158 aaKnown RBP eCLIP10.53□□□□□ -0.72
GABPB1-208ENST00000558970 HOXA4Q00056 320 aaPredicted RBP10.53□□□□□ -0.72
GABPB1-208ENST00000558970 BDH1Q02338 343 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 MAB21L1Q13394 359 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 MPPED2Q15777 294 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 YIF1BQ5BJH7 314 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 Q5PR19 223 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 UBE2UQ5VVX9 321 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 WDR86Q86TI4 376 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 BATF2Q8N1L9 274 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 BOLLQ8N9W6 283 aaKnown RBP10.53□□□□□ -0.72
GABPB1-208ENST00000558970 NEU4Q8WWR8 484 aaPredicted RBP10.53□□□□□ -0.72
GABPB1-208ENST00000558970 CCL17Q92583 94 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 YIPF5Q969M3 257 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 TMEM106AQ96A25 262 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 ITPKCQ96DU7 683 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 RNF170Q96K19 258 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 SPACA5Q96QH8 159 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 HIST1H2AAQ96QV6 131 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 DIRC2Q96SL1 478 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 NKX3-1Q99801 234 aaPredicted RBP10.53□□□□□ -0.72
GABPB1-208ENST00000558970 MICU1Q9BPX6 476 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 RTL8AQ9BWD3 113 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 GSX2Q9BZM3 304 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 FGF23Q9GZV9 251 aaPredicted RBP10.53□□□□□ -0.72
GABPB1-208ENST00000558970 SLC22A4Q9H015 551 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 CXXC4Q9H2H0 198 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 ZNF701Q9NV72 531 aaPredicted RBP10.53□□□□□ -0.72
GABPB1-208ENST00000558970 DCAF16Q9NXF7 216 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 NKIRAS2Q9NYR9 191 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 TAS2R4Q9NYW5 299 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 IL19Q9UHD0 177 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 MPC1Q9Y5U8 109 aa10.53□□□□□ -0.72
GABPB1-208ENST00000558970 IGHV1-69-2A0A0G2JMI3 117 aa10.52□□□□□ -0.73
GABPB1-208ENST00000558970 ZNF732B4DXR9 585 aa10.52□□□□□ -0.73
GABPB1-208ENST00000558970 C3orf80F5H4A9 247 aa10.52□□□□□ -0.73
GABPB1-208ENST00000558970 CYB5R3P00387 301 aaPredicted RBP10.52□□□□□ -0.73
GABPB1-208ENST00000558970 CD2P06729 351 aa10.52□□□□□ -0.73
GABPB1-208ENST00000558970 SMIM18P0DKX4 95 aa10.52□□□□□ -0.73
GABPB1-208ENST00000558970 CPEP16870 476 aa10.52□□□□□ -0.73
GABPB1-208ENST00000558970 TNFRSF1AP19438 455 aa10.52□□□□□ -0.73
GABPB1-208ENST00000558970 TESK1Q15569 626 aa10.52□□□□□ -0.73
GABPB1-208ENST00000558970 UBE2V2Q15819 145 aa10.52□□□□□ -0.73
GABPB1-208ENST00000558970 SSX1Q16384 188 aa10.52□□□□□ -0.73
GABPB1-208ENST00000558970 Q499Y3 187 aa10.52□□□□□ -0.73
GABPB1-208ENST00000558970 FAM209AQ5JX71 171 aa10.52□□□□□ -0.73
GABPB1-208ENST00000558970 FAM27D1Q5T7N8 215 aa10.52□□□□□ -0.73
GABPB1-208ENST00000558970 ZNF826PQ6ZT77 177 aa10.52□□□□□ -0.73
GABPB1-208ENST00000558970 PHC2Q8IXK0 858 aa10.52□□□□□ -0.73
GABPB1-208ENST00000558970 C19orf18Q8NEA5 215 aa10.52□□□□□ -0.73
GABPB1-208ENST00000558970 OR5P3Q8WZ94 311 aa10.52□□□□□ -0.73
GABPB1-208ENST00000558970 FCGR1BQ92637 280 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms