RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 HMG20AQ9NP66 347 aa0.99□□□□□ -2.25
USP3-209ENST00000558925 SIRT7Q9NRC8 400 aa0.99□□□□□ -2.25
USP3-209ENST00000558925 FBXO6Q9NRD1 293 aaPredicted RBP0.99□□□□□ -2.25
USP3-209ENST00000558925 OPN4Q9UHM6 478 aa0.99□□□□□ -2.25
USP3-209ENST00000558925 CLEC2DQ9UHP7 191 aa0.99□□□□□ -2.25
USP3-209ENST00000558925 GGA2Q9UJY4 613 aa0.99□□□□□ -2.25
USP3-209ENST00000558925 NDRG2Q9UN36 371 aaKnown RBP0.99□□□□□ -2.25
USP3-209ENST00000558925 POFUT2Q9Y2G5 429 aa0.99□□□□□ -2.25
USP3-209ENST00000558925 HES2Q9Y543 173 aa0.99□□□□□ -2.25
USP3-209ENST00000558925 BAZ2AQ9UIF9 1905 aaKnown RBP0.99□□□□□ -2.25
USP3-209ENST00000558925 TUBGCP6Q96RT7 1819 aa0.99□□□□□ -2.25
USP3-209ENST00000558925 SBNO1A3KN83 1393 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 JCADQ9P266 1359 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 IGHV2OR16-5A0A0B4J2B6 119 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 FAM240AA0A1B0GVK7 77 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 A0A1B0GW15 77 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 GSTTP1A0A1W2PQM5 241 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 RAB19A4D1S5 217 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 MGAT4DA6NG13 374 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 SEC14L6B5MCN3 397 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 J3QT63 122 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 M0R1B8 84 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 TNFRSF11BO00300 401 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 PRMT5O14744 637 aaPredicted RBP0.98□□□□□ -2.25
USP3-209ENST00000558925 CHST10O43529 356 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 ALOX12BO75342 701 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 ZNF324O75467 553 aaPredicted RBP0.98□□□□□ -2.25
USP3-209ENST00000558925 DHRS3O75911 302 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 WISP3O95389 354 aaPredicted RBP0.98□□□□□ -2.25
USP3-209ENST00000558925 CCNE2O96020 404 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 NPPAP01160 153 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 IGHV3-11P01762 117 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 IVLP07476 585 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 MRPL3P09001 348 aaKnown RBP0.98□□□□□ -2.25
USP3-209ENST00000558925 HSPD1P10809 573 aaKnown RBP0.98□□□□□ -2.25
USP3-209ENST00000558925 ZNF32P17041 273 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 CCNOP22674 350 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 ME2P23368 584 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 CXCR1P25024 350 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 OPRK1P41145 380 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 CXCL12P48061 93 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 PSMC5P62195 406 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 TNNC1P63316 161 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 SLC35A1P78382 337 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 ELF3P78545 371 aaPredicted RBP0.98□□□□□ -2.25
USP3-209ENST00000558925 IL5RAQ01344 420 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 PPIDQ08752 370 aaKnown RBP0.98□□□□□ -2.25
USP3-209ENST00000558925 C2orf80Q0P641 193 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 CDC20Q12834 499 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 DMC1Q14565 340 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 SLC25A35Q3KQZ1 300 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 ABCA11PQ4W5N1 156 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 ACTL10Q5JWF8 245 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 FAM27D1Q5T7N8 215 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 NANOGP8Q6NSW7 305 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 Q6ZSR6 202 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 RBM45Q8IUH3 476 aaKnown RBP0.98□□□□□ -2.25
USP3-209ENST00000558925 SAXO1Q8IYX7 474 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 TMEM256Q8N2U0 113 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 TCAIMQ8N3R3 496 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 TRIML2Q8N7C3 387 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 ZNF709Q8N972 641 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 UBAC2Q8NBM4 344 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 TTLQ8NG68 377 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 OR5T1Q8NG75 326 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 OR4M1Q8NGD0 313 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 OR13G1Q8NGZ3 307 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 OR10G6Q8NH81 332 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 ZNF461Q8TAF7 563 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 UBALD1Q8TB05 177 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 LRRC20Q8TCA0 184 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 DCAKDQ8WVC6 231 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 FRZBQ92765 325 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 L3HYPDHQ96EM0 354 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 MSANTD3Q96H12 275 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 GLT1D1Q96MS3 346 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 Q96MT0 163 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 TEAD3Q99594 435 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 LZTS2Q9BRK4 669 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 C1orf198Q9H425 327 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 PLEKHF2Q9H8W4 249 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 ZNF302Q9NR11 478 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 HEBP1Q9NRV9 189 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 CA10Q9NS85 328 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 NRBP2Q9NSY0 501 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 DDX19AQ9NUU7 478 aaKnown RBP0.98□□□□□ -2.25
USP3-209ENST00000558925 RMND1Q9NWS8 449 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 LRRC42Q9Y546 428 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 WIF1Q9Y5W5 379 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 TMEM14AQ9Y6G1 99 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 ZNF608Q9ULD9 1512 aaPredicted RBP0.98□□□□□ -2.25
USP3-209ENST00000558925 YEATS2Q9ULM3 1422 aa0.98□□□□□ -2.25
USP3-209ENST00000558925 MIA3Q5JRA6 1907 aa0.97□□□□□ -2.25
USP3-209ENST00000558925 HMCN1Q96RW7 5635 aa0.97□□□□□ -2.25
USP3-209ENST00000558925 IGKV2D-24A0A075B6R9 120 aa0.97□□□□□ -2.25
USP3-209ENST00000558925 IGHV3-49A0A0A0MS15 119 aa0.97□□□□□ -2.25
USP3-209ENST00000558925 IGHV6-1A0A0B4J1U7 121 aa0.97□□□□□ -2.25
USP3-209ENST00000558925 TRAV8-4A0A0B4J246 113 aa0.97□□□□□ -2.25
USP3-209ENST00000558925 TRAV8-6A0A0B4J262 113 aa0.97□□□□□ -2.25
USP3-209ENST00000558925 IGHV7-4-1A0A0J9YVY3 117 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms