RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 RTL8AQ9BWD3 113 aa14.09□□□□□ -0.15
LRRC28-210ENST00000558879 PRRG3Q9BZD7 231 aa14.09□□□□□ -0.15
LRRC28-210ENST00000558879 SIRPDQ9H106 197 aa14.09□□□□□ -0.15
LRRC28-210ENST00000558879 DUX4Q9UBX2 424 aa14.09□□□□□ -0.15
LRRC28-210ENST00000558879 MDFIC2A0A1B0GVS7 189 aa14.08□□□□□ -0.16
LRRC28-210ENST00000558879 ACOD1A6NK06 481 aa14.08□□□□□ -0.16
LRRC28-210ENST00000558879 ZAR1LA6NP61 321 aa14.08□□□□□ -0.16
LRRC28-210ENST00000558879 DVL1O14640 695 aa14.08□□□□□ -0.16
LRRC28-210ENST00000558879 CDIPTO14735 213 aa14.08□□□□□ -0.16
LRRC28-210ENST00000558879 SFTPBP07988 381 aa14.08□□□□□ -0.16
LRRC28-210ENST00000558879 MRPL3P09001 348 aaKnown RBP14.08□□□□□ -0.16
LRRC28-210ENST00000558879 EPHA2P29317 976 aa14.08□□□□□ -0.16
LRRC28-210ENST00000558879 BPIFB3P59826 476 aa14.08□□□□□ -0.16
LRRC28-210ENST00000558879 ELF3P78545 371 aaPredicted RBP14.08□□□□□ -0.16
LRRC28-210ENST00000558879 BAMBIQ13145 260 aa14.08□□□□□ -0.16
LRRC28-210ENST00000558879 WDR38Q5JTN6 314 aa14.08□□□□□ -0.16
LRRC28-210ENST00000558879 C12orf73Q69YU5 71 aa14.08□□□□□ -0.16
LRRC28-210ENST00000558879 STUMQ69YW2 141 aa14.08□□□□□ -0.16
LRRC28-210ENST00000558879 KCTD18Q6PI47 426 aaPredicted RBP14.08□□□□□ -0.16
LRRC28-210ENST00000558879 BRD3OSQ6XYD6 125 aa14.08□□□□□ -0.16
LRRC28-210ENST00000558879 OR10Z1Q8NGY1 313 aa14.08□□□□□ -0.16
LRRC28-210ENST00000558879 ITFG2Q969R8 447 aa14.08□□□□□ -0.16
LRRC28-210ENST00000558879 DUX5Q96PT3 197 aa14.08□□□□□ -0.16
LRRC28-210ENST00000558879 KRT84Q9NSB2 600 aa14.08□□□□□ -0.16
LRRC28-210ENST00000558879 ZNF850A8MQ14 1090 aa14.07□□□□□ -0.16
LRRC28-210ENST00000558879 M0R129 80 aa14.07□□□□□ -0.16
LRRC28-210ENST00000558879 P2RY10O00398 339 aa14.07□□□□□ -0.16
LRRC28-210ENST00000558879 TMPRSS2O15393 492 aa14.07□□□□□ -0.16
LRRC28-210ENST00000558879 MITFO75030 526 aaPredicted RBP14.07□□□□□ -0.16
LRRC28-210ENST00000558879 ZNF254O75437 659 aa14.07□□□□□ -0.16
LRRC28-210ENST00000558879 SRSF10O75494 262 aaKnown RBP14.07□□□□□ -0.16
LRRC28-210ENST00000558879 AMY2BP19961 511 aa14.07□□□□□ -0.16
LRRC28-210ENST00000558879 RASSF2P50749 326 aa14.07□□□□□ -0.16
LRRC28-210ENST00000558879 SLC9A3R2Q15599 337 aa14.07□□□□□ -0.16
LRRC28-210ENST00000558879 MICBQ29980 383 aa14.07□□□□□ -0.16
LRRC28-210ENST00000558879 GPR157Q5UAW9 335 aa14.07□□□□□ -0.16
LRRC28-210ENST00000558879 AADACL4Q5VUY2 407 aa14.07□□□□□ -0.16
LRRC28-210ENST00000558879 NXNL2Q5VZ03 156 aa14.07□□□□□ -0.16
LRRC28-210ENST00000558879 ZNF679Q8IYX0 411 aa14.07□□□□□ -0.16
LRRC28-210ENST00000558879 FGFRL1Q8N441 504 aa14.07□□□□□ -0.16
LRRC28-210ENST00000558879 PNLDC1Q8NA58 520 aaKnown RBP14.07□□□□□ -0.16
LRRC28-210ENST00000558879 SEH1LQ96EE3 360 aa14.07□□□□□ -0.16
LRRC28-210ENST00000558879 WDFY2Q96P53 400 aa14.07□□□□□ -0.16
LRRC28-210ENST00000558879 CNN2Q99439 309 aaKnown RBP14.07□□□□□ -0.16
LRRC28-210ENST00000558879 PCGF1Q9BSM1 259 aa14.07□□□□□ -0.16
LRRC28-210ENST00000558879 MROQ9BYG7 248 aa14.07□□□□□ -0.16
LRRC28-210ENST00000558879 RASSF4Q9H2L5 321 aa14.07□□□□□ -0.16
LRRC28-210ENST00000558879 NUFIP1Q9UHK0 495 aaKnown RBP14.07□□□□□ -0.16
LRRC28-210ENST00000558879 TMEM14AQ9Y6G1 99 aa14.07□□□□□ -0.16
LRRC28-210ENST00000558879 ZNF816-ZNF321PA0A0X1KG74 233 aa14.06□□□□□ -0.16
LRRC28-210ENST00000558879 G3V2T6 193 aa14.06□□□□□ -0.16
LRRC28-210ENST00000558879 PSMD9O00233 223 aa14.06□□□□□ -0.16
LRRC28-210ENST00000558879 TOX4O94842 621 aa14.06□□□□□ -0.16
LRRC28-210ENST00000558879 ECDO95905 644 aaPredicted RBP14.06□□□□□ -0.16
LRRC28-210ENST00000558879 MFGE8Q08431 387 aaPredicted RBP14.06□□□□□ -0.16
LRRC28-210ENST00000558879 POU4F2Q12837 409 aa14.06□□□□□ -0.16
LRRC28-210ENST00000558879 FOXL1Q12952 345 aa14.06□□□□□ -0.16
LRRC28-210ENST00000558879 DEFB112Q30KQ8 113 aa14.06□□□□□ -0.16
LRRC28-210ENST00000558879 ATPAF1Q5TC12 328 aaPredicted RBP14.06□□□□□ -0.16
LRRC28-210ENST00000558879 RUSC1-AS1Q66K80 236 aa14.06□□□□□ -0.16
LRRC28-210ENST00000558879 BTN2A1Q7KYR7 527 aa14.06□□□□□ -0.16
LRRC28-210ENST00000558879 BCDIN3DQ7Z5W3 292 aaKnown RBP14.06□□□□□ -0.16
LRRC28-210ENST00000558879 ZDHHC23Q8IYP9 409 aa14.06□□□□□ -0.16
LRRC28-210ENST00000558879 FAM216BQ8N7L0 139 aa14.06□□□□□ -0.16
LRRC28-210ENST00000558879 C3orf56Q8N813 242 aa14.06□□□□□ -0.16
LRRC28-210ENST00000558879 TMEM163Q8TC26 289 aa14.06□□□□□ -0.16
LRRC28-210ENST00000558879 ASB17Q8WXJ9 295 aa14.06□□□□□ -0.16
LRRC28-210ENST00000558879 PIGCQ92535 297 aa14.06□□□□□ -0.16
LRRC28-210ENST00000558879 SLC25A28Q96A46 364 aa14.06□□□□□ -0.16
LRRC28-210ENST00000558879 DMRTB1Q96MA1 342 aa14.06□□□□□ -0.16
LRRC28-210ENST00000558879 TTTY10Q9BZA0 68 aa14.06□□□□□ -0.16
LRRC28-210ENST00000558879 PBOV1Q9GZY1 135 aa14.06□□□□□ -0.16
LRRC28-210ENST00000558879 DNTTIP1Q9H147 329 aa14.06□□□□□ -0.16
LRRC28-210ENST00000558879 ADGRL4Q9HBW9 690 aa14.06□□□□□ -0.16
LRRC28-210ENST00000558879 RPUSD1Q9UJJ7 312 aaKnown RBP14.06□□□□□ -0.16
LRRC28-210ENST00000558879 CENPVL3A0A0U1RRI6 287 aa14.05□□□□□ -0.16
LRRC28-210ENST00000558879 TMEM269A0A1B0GVZ9 245 aa14.05□□□□□ -0.16
LRRC28-210ENST00000558879 SLC22A31A6NKX4 558 aa14.05□□□□□ -0.16
LRRC28-210ENST00000558879 ATP5HO75947 161 aa14.05□□□□□ -0.16
LRRC28-210ENST00000558879 ATP6V1B1P15313 513 aa14.05□□□□□ -0.16
LRRC28-210ENST00000558879 FASP25445 335 aa14.05□□□□□ -0.16
LRRC28-210ENST00000558879 MAP2K3P46734 347 aa14.05□□□□□ -0.16
LRRC28-210ENST00000558879 ZNF829Q3KNS6 432 aaPredicted RBP14.05□□□□□ -0.16
LRRC28-210ENST00000558879 METTL11BQ5VVY1 283 aa14.05□□□□□ -0.16
LRRC28-210ENST00000558879 MEPCEQ7L2J0 689 aaKnown RBP14.05□□□□□ -0.16
LRRC28-210ENST00000558879 SLC36A1Q7Z2H8 476 aa14.05□□□□□ -0.16
LRRC28-210ENST00000558879 TCEANCQ8N8B7 351 aa14.05□□□□□ -0.16
LRRC28-210ENST00000558879 SCCPDHQ8NBX0 429 aa14.05□□□□□ -0.16
LRRC28-210ENST00000558879 LY6G5BQ8NDX9 201 aa14.05□□□□□ -0.16
LRRC28-210ENST00000558879 ST8SIA4Q92187 359 aa14.05□□□□□ -0.16
LRRC28-210ENST00000558879 RPL3LQ92901 407 aaKnown RBP14.05□□□□□ -0.16
LRRC28-210ENST00000558879 RAB3IPQ96QF0 476 aaPredicted RBP14.05□□□□□ -0.16
LRRC28-210ENST00000558879 MNTQ99583 582 aa14.05□□□□□ -0.16
LRRC28-210ENST00000558879 CCL13Q99616 98 aa14.05□□□□□ -0.16
LRRC28-210ENST00000558879 WDR13Q9H1Z4 485 aa14.05□□□□□ -0.16
LRRC28-210ENST00000558879 MOB1AQ9H8S9 216 aa14.05□□□□□ -0.16
LRRC28-210ENST00000558879 HAO2Q9NYQ3 351 aa14.05□□□□□ -0.16
LRRC28-210ENST00000558879 AP4S1Q9Y587 144 aa14.05□□□□□ -0.16
LRRC28-210ENST00000558879 TTRP02766 147 aa14.04□□□□□ -0.16
LRRC28-210ENST00000558879 FCGR1AP12314 374 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms