RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 GPR137BO60478 399 aa11.13□□□□□ -0.63
VPS18-203ENST00000558855 FAM107AO95990 144 aa11.13□□□□□ -0.63
VPS18-203ENST00000558855 LYNP07948 512 aa11.13□□□□□ -0.63
VPS18-203ENST00000558855 PRR23D2P0DMB1 279 aaPredicted RBP11.13□□□□□ -0.63
VPS18-203ENST00000558855 SLC15A1P46059 708 aa11.13□□□□□ -0.63
VPS18-203ENST00000558855 TGM4P49221 684 aa11.13□□□□□ -0.63
VPS18-203ENST00000558855 MNAT1P51948 309 aa11.13□□□□□ -0.63
VPS18-203ENST00000558855 PSMA6P60900 246 aaKnown RBP11.13□□□□□ -0.63
VPS18-203ENST00000558855 KCNJ8Q15842 424 aa11.13□□□□□ -0.63
VPS18-203ENST00000558855 TAF9Q16594 264 aa11.13□□□□□ -0.63
VPS18-203ENST00000558855 DGUOKQ16854 277 aa11.13□□□□□ -0.63
VPS18-203ENST00000558855 METTL11BQ5VVY1 283 aa11.13□□□□□ -0.63
VPS18-203ENST00000558855 CD276Q5ZPR3 534 aa11.13□□□□□ -0.63
VPS18-203ENST00000558855 BCDIN3DQ7Z5W3 292 aaKnown RBP11.13□□□□□ -0.63
VPS18-203ENST00000558855 PNLDC1Q8NA58 520 aaKnown RBP11.13□□□□□ -0.63
VPS18-203ENST00000558855 SCCPDHQ8NBX0 429 aa11.13□□□□□ -0.63
VPS18-203ENST00000558855 CCDC197Q8NCU1 140 aa11.13□□□□□ -0.63
VPS18-203ENST00000558855 THEM6Q8WUY1 208 aa11.13□□□□□ -0.63
VPS18-203ENST00000558855 GATAD2BQ8WXI9 593 aa11.13□□□□□ -0.63
VPS18-203ENST00000558855 OR5P3Q8WZ94 311 aa11.13□□□□□ -0.63
VPS18-203ENST00000558855 PKP2Q99959 881 aa11.13□□□□□ -0.63
VPS18-203ENST00000558855 SLITRK2Q9H156 845 aa11.13□□□□□ -0.63
VPS18-203ENST00000558855 OR10A2Q9H208 303 aa11.13□□□□□ -0.63
VPS18-203ENST00000558855 NOX4Q9NPH5 578 aa11.13□□□□□ -0.63
VPS18-203ENST00000558855 DSCAML1Q8TD84 2053 aa11.12□□□□□ -0.63
VPS18-203ENST00000558855 MAGEB4O15481 346 aaPredicted RBP11.12□□□□□ -0.63
VPS18-203ENST00000558855 NDUFA2O43678 99 aa11.12□□□□□ -0.63
VPS18-203ENST00000558855 NDUFA7O95182 113 aa11.12□□□□□ -0.63
VPS18-203ENST00000558855 MRPL3P09001 348 aaKnown RBP11.12□□□□□ -0.63
VPS18-203ENST00000558855 OSMP13725 252 aa11.12□□□□□ -0.63
VPS18-203ENST00000558855 MUC1P15941 1255 aaPredicted RBP11.12□□□□□ -0.63
VPS18-203ENST00000558855 ALOX5APP20292 161 aa11.12□□□□□ -0.63
VPS18-203ENST00000558855 IER3P46695 156 aa11.12□□□□□ -0.63
VPS18-203ENST00000558855 BLVRAP53004 296 aa11.12□□□□□ -0.63
VPS18-203ENST00000558855 MFGE8Q08431 387 aaPredicted RBP11.12□□□□□ -0.63
VPS18-203ENST00000558855 PDCD1Q15116 288 aa11.12□□□□□ -0.63
VPS18-203ENST00000558855 HIST2H2BDQ6DRA6 164 aa11.12□□□□□ -0.63
VPS18-203ENST00000558855 HCP5Q6MZN7 132 aa11.12□□□□□ -0.63
VPS18-203ENST00000558855 ZNF788Q6ZQV5 615 aa11.12□□□□□ -0.63
VPS18-203ENST00000558855 SHFQ7M4L6 423 aa11.12□□□□□ -0.63
VPS18-203ENST00000558855 TRPM8Q7Z2W7 1104 aa11.12□□□□□ -0.63
VPS18-203ENST00000558855 LDLRAD3Q86YD5 345 aa11.12□□□□□ -0.63
VPS18-203ENST00000558855 GALNT4Q8N4A0 578 aa11.12□□□□□ -0.63
VPS18-203ENST00000558855 OR52H1Q8NGJ2 320 aa11.12□□□□□ -0.63
VPS18-203ENST00000558855 C17orf50Q8WW18 174 aa11.12□□□□□ -0.63
VPS18-203ENST00000558855 PIGCQ92535 297 aa11.12□□□□□ -0.63
VPS18-203ENST00000558855 TNFRSF14Q92956 283 aa11.12□□□□□ -0.63
VPS18-203ENST00000558855 SLC7A6OSQ96CW6 309 aaPredicted RBP11.12□□□□□ -0.63
VPS18-203ENST00000558855 RAB3IPQ96QF0 476 aaPredicted RBP11.12□□□□□ -0.63
VPS18-203ENST00000558855 CITED1Q99966 193 aa11.12□□□□□ -0.63
VPS18-203ENST00000558855 DCTN5Q9BTE1 182 aa11.12□□□□□ -0.63
VPS18-203ENST00000558855 CNTD2Q9H8S5 307 aa11.12□□□□□ -0.63
VPS18-203ENST00000558855 FAM206AQ9NX38 181 aa11.12□□□□□ -0.63
VPS18-203ENST00000558855 HAO2Q9NYQ3 351 aa11.12□□□□□ -0.63
VPS18-203ENST00000558855 ONECUT1Q9UBC0 465 aa11.12□□□□□ -0.63
VPS18-203ENST00000558855 WNK1Q9H4A3 2382 aa11.12□□□□□ -0.63
VPS18-203ENST00000558855 IGKV1D-17A0A075B6S4 117 aa11.11□□□□□ -0.63
VPS18-203ENST00000558855 MEGF11A6BM72 1044 aa11.11□□□□□ -0.63
VPS18-203ENST00000558855 CST4P01036 141 aa11.11□□□□□ -0.63
VPS18-203ENST00000558855 IGLV3-1P01715 115 aa11.11□□□□□ -0.63
VPS18-203ENST00000558855 LIPFP07098 398 aa11.11□□□□□ -0.63
VPS18-203ENST00000558855 PAX6P26367 422 aa11.11□□□□□ -0.63
VPS18-203ENST00000558855 GNALP38405 381 aa11.11□□□□□ -0.63
VPS18-203ENST00000558855 APOFQ13790 326 aa11.11□□□□□ -0.63
VPS18-203ENST00000558855 MICBQ29980 383 aa11.11□□□□□ -0.63
VPS18-203ENST00000558855 CDONQ4KMG0 1287 aa11.11□□□□□ -0.63
VPS18-203ENST00000558855 CEP78Q5JTW2 689 aa11.11□□□□□ -0.63
VPS18-203ENST00000558855 OLFML2AQ68BL7 652 aa11.11□□□□□ -0.63
VPS18-203ENST00000558855 CSNK2A3Q8NEV1 391 aa11.11□□□□□ -0.63
VPS18-203ENST00000558855 ANGPTL6Q8NI99 470 aa11.11□□□□□ -0.63
VPS18-203ENST00000558855 LRGUKQ96M69 825 aa11.11□□□□□ -0.63
VPS18-203ENST00000558855 ZNF488Q96MN9 340 aa11.11□□□□□ -0.63
VPS18-203ENST00000558855 SP140LQ9H930 580 aa11.11□□□□□ -0.63
VPS18-203ENST00000558855 SLC25A19Q9HC21 320 aa11.11□□□□□ -0.63
VPS18-203ENST00000558855 TRIM36Q9NQ86 728 aa11.11□□□□□ -0.63
VPS18-203ENST00000558855 ZNRD1Q9P1U0 126 aa11.11□□□□□ -0.63
VPS18-203ENST00000558855 ZNF391Q9UJN7 358 aa11.11□□□□□ -0.63
VPS18-203ENST00000558855 ZNF222Q9UK12 451 aa11.11□□□□□ -0.63
VPS18-203ENST00000558855 KPTNQ9Y664 436 aa11.11□□□□□ -0.63
VPS18-203ENST00000558855 TGP01266 2768 aa11.11□□□□□ -0.63
VPS18-203ENST00000558855 TCRBV3S1A0A5B6 114 aa11.1□□□□□ -0.63
VPS18-203ENST00000558855 AQP12BA6NM10 295 aa11.1□□□□□ -0.63
VPS18-203ENST00000558855 PRODHO43272 600 aa11.1□□□□□ -0.63
VPS18-203ENST00000558855 MITFO75030 526 aaPredicted RBP11.1□□□□□ -0.63
VPS18-203ENST00000558855 FKBP6O75344 327 aa11.1□□□□□ -0.63
VPS18-203ENST00000558855 SRSF10O75494 262 aaKnown RBP11.1□□□□□ -0.63
VPS18-203ENST00000558855 TIPRLO75663 272 aa11.1□□□□□ -0.63
VPS18-203ENST00000558855 KNG1P01042 644 aa11.1□□□□□ -0.63
VPS18-203ENST00000558855 EPHA2P29317 976 aa11.1□□□□□ -0.63
VPS18-203ENST00000558855 GPM6AP51674 278 aa11.1□□□□□ -0.63
VPS18-203ENST00000558855 BPIFB3P59826 476 aa11.1□□□□□ -0.63
VPS18-203ENST00000558855 CBX1P83916 185 aa11.1□□□□□ -0.63
VPS18-203ENST00000558855 FAM76BQ5HYJ3 339 aa11.1□□□□□ -0.63
VPS18-203ENST00000558855 ATPAF1Q5TC12 328 aaPredicted RBP11.1□□□□□ -0.63
VPS18-203ENST00000558855 AQP12AQ8IXF9 295 aa11.1□□□□□ -0.63
VPS18-203ENST00000558855 TMEM86BQ8N661 226 aa11.1□□□□□ -0.63
VPS18-203ENST00000558855 LINC01006Q8NI28 216 aa11.1□□□□□ -0.63
VPS18-203ENST00000558855 C8orf46Q8TAG6 207 aa11.1□□□□□ -0.63
VPS18-203ENST00000558855 SSMEM1Q8WWF3 244 aa11.1□□□□□ -0.63
VPS18-203ENST00000558855 H1FXQ92522 213 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms