RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 RPS6KA3P51812 740 aa7.9□□□□□ -1.14
SPG11-212ENST00000558790 RAP2BP61225 183 aa7.9□□□□□ -1.14
SPG11-212ENST00000558790 ZNF92Q03936 586 aa7.9□□□□□ -1.14
SPG11-212ENST00000558790 KLF10Q13118 480 aa7.9□□□□□ -1.14
SPG11-212ENST00000558790 KLRD1Q13241 179 aa7.9□□□□□ -1.14
SPG11-212ENST00000558790 SEC23BQ15437 767 aa7.9□□□□□ -1.14
SPG11-212ENST00000558790 PCK2Q16822 640 aa7.9□□□□□ -1.14
SPG11-212ENST00000558790 FGD3Q5JSP0 725 aa7.9□□□□□ -1.14
SPG11-212ENST00000558790 TEX36Q5VZQ5 186 aa7.9□□□□□ -1.14
SPG11-212ENST00000558790 DPY19L2P2Q6ZN68 376 aa7.9□□□□□ -1.14
SPG11-212ENST00000558790 RRM2BQ7LG56 351 aa7.9□□□□□ -1.14
SPG11-212ENST00000558790 OR6V1Q8N148 313 aa7.9□□□□□ -1.14
SPG11-212ENST00000558790 LNX2Q8N448 690 aa7.9□□□□□ -1.14
SPG11-212ENST00000558790 ST8SIA2Q92186 375 aa7.9□□□□□ -1.14
SPG11-212ENST00000558790 ZNF799Q96GE5 643 aa7.9□□□□□ -1.14
SPG11-212ENST00000558790 NMNAT3Q96T66 252 aa7.9□□□□□ -1.14
SPG11-212ENST00000558790 SLC22A4Q9H015 551 aa7.9□□□□□ -1.14
SPG11-212ENST00000558790 TOR3AQ9H497 397 aa7.9□□□□□ -1.14
SPG11-212ENST00000558790 RPRD1BQ9NQG5 326 aaKnown RBP7.9□□□□□ -1.14
SPG11-212ENST00000558790 CMTM6Q9NX76 183 aa7.9□□□□□ -1.14
SPG11-212ENST00000558790 CYB5R1Q9UHQ9 305 aa7.9□□□□□ -1.14
SPG11-212ENST00000558790 B9D1Q9UPM9 204 aa7.9□□□□□ -1.14
SPG11-212ENST00000558790 NOP16Q9Y3C1 178 aaKnown RBP7.9□□□□□ -1.14
SPG11-212ENST00000558790 FAM96BQ9Y3D0 163 aa7.9□□□□□ -1.14
SPG11-212ENST00000558790 PCLOQ9Y6V0 5065 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 TRBV4-1A0A0J9YWV2 114 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 A0A1W2PRD5 423 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 A0A1W2PRF3 423 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 A0A1W2PRM7 423 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 A0A1W2PRQ8 180 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 UNC119BA6NIH7 251 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 RNASEK-C17orf49H0YIS7 233 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 CXCR6O00574 342 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 NDUFA2O43678 99 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 GMDSO60547 372 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 ECDO95905 644 aaPredicted RBP7.89□□□□□ -1.15
SPG11-212ENST00000558790 SERPINA1P01009 418 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 H1F0P07305 194 aaKnown RBP7.89□□□□□ -1.15
SPG11-212ENST00000558790 GRPP07492 148 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 PSKH1P11801 424 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 TGFBR2P37173 567 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 RPS27P42677 84 aaKnown RBP7.89□□□□□ -1.15
SPG11-212ENST00000558790 ECH1Q13011 328 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 DGCR6Q14129 220 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 MAPRE2Q15555 327 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 FAM189A2Q15884 450 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 RFX4Q33E94 735 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 WDR38Q5JTN6 314 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 VAX1Q5SQQ9 334 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 GLYATL3Q5SZD4 288 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 C11orf87Q6NUJ2 197 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 SMARCD3Q6STE5 483 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 METAP1DQ6UB28 335 aaPredicted RBP7.89□□□□□ -1.15
SPG11-212ENST00000558790 Q6ZRM9 215 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 WDR86Q86TI4 376 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 CYP4Z1Q86W10 505 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 PNKDQ8N490 385 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 FAM216BQ8N7L0 139 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 OR56B2PQ8NGI1 322 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 RCN3Q96D15 328 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 ERMAPQ96PL5 475 aaPredicted RBP7.89□□□□□ -1.15
SPG11-212ENST00000558790 PPA2Q9H2U2 334 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 SAR1AQ9NR31 198 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 GID8Q9NWU2 228 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 MRPL22Q9NWU5 206 aaKnown RBP7.89□□□□□ -1.15
SPG11-212ENST00000558790 ADA2Q9NZK5 511 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 MRPL15Q9P015 296 aaKnown RBP7.89□□□□□ -1.15
SPG11-212ENST00000558790 KAAG1Q9UBP8 84 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 DNAJB11Q9UBS4 358 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 SLC23A1Q9UHI7 598 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 AURKCQ9UQB9 309 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 SIGLEC9Q9Y336 463 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 ENPP4Q9Y6X5 453 aa7.89□□□□□ -1.15
SPG11-212ENST00000558790 ANKRD61A6NGH8 418 aa7.88□□□□□ -1.15
SPG11-212ENST00000558790 GGT3PA6NGU5 568 aa7.88□□□□□ -1.15
SPG11-212ENST00000558790 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.88□□□□□ -1.15
SPG11-212ENST00000558790 NME4O00746 187 aa7.88□□□□□ -1.15
SPG11-212ENST00000558790 NPFFO15130 113 aa7.88□□□□□ -1.15
SPG11-212ENST00000558790 RENP00797 406 aa7.88□□□□□ -1.15
SPG11-212ENST00000558790 LHBP01229 141 aa7.88□□□□□ -1.15
SPG11-212ENST00000558790 HLA-DQA2P01906 255 aa7.88□□□□□ -1.15
SPG11-212ENST00000558790 TROVE2P10155 538 aaKnown RBP eCLIP7.88□□□□□ -1.15
SPG11-212ENST00000558790 SELLP14151 372 aa7.88□□□□□ -1.15
SPG11-212ENST00000558790 HIST1H1CP16403 213 aaKnown RBP7.88□□□□□ -1.15
SPG11-212ENST00000558790 GABRA5P31644 462 aa7.88□□□□□ -1.15
SPG11-212ENST00000558790 OTX1P32242 354 aaPredicted RBP7.88□□□□□ -1.15
SPG11-212ENST00000558790 SAA4P35542 130 aa7.88□□□□□ -1.15
SPG11-212ENST00000558790 TPTEP56180 551 aa7.88□□□□□ -1.15
SPG11-212ENST00000558790 CSNK2BP67870 215 aa7.88□□□□□ -1.15
SPG11-212ENST00000558790 LIPEQ05469 1076 aa7.88□□□□□ -1.15
SPG11-212ENST00000558790 SF3A3Q12874 501 aaKnown RBP eCLIP7.88□□□□□ -1.15
SPG11-212ENST00000558790 HERPUD1Q15011 391 aa7.88□□□□□ -1.15
SPG11-212ENST00000558790 SLC35E4Q6ICL7 350 aa7.88□□□□□ -1.15
SPG11-212ENST00000558790 CCBE1Q6UXH8 406 aaPredicted RBP7.88□□□□□ -1.15
SPG11-212ENST00000558790 Q6ZTK2 550 aa7.88□□□□□ -1.15
SPG11-212ENST00000558790 SLC15A3Q8IY34 581 aa7.88□□□□□ -1.15
SPG11-212ENST00000558790 GALNT4Q8N4A0 578 aa7.88□□□□□ -1.15
SPG11-212ENST00000558790 Q8N7P7 452 aa7.88□□□□□ -1.15
SPG11-212ENST00000558790 C11orf44Q8N8P7 122 aa7.88□□□□□ -1.15
SPG11-212ENST00000558790 LY6G5BQ8NDX9 201 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms