RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 PRPF19Q9UMS4 504 aaKnown RBP3.57□□□□□ -1.84
SPG11-211ENST00000558561 KLHDC2Q9Y2U9 406 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 SAMHD1Q9Y3Z3 626 aaKnown RBP3.57□□□□□ -1.84
SPG11-211ENST00000558561 CMAHPQ9Y471 501 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 TIMM10BQ9Y5J6 103 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 SOX21Q9Y651 276 aaPredicted RBP3.57□□□□□ -1.84
SPG11-211ENST00000558561 FBN1P35555 2871 aaKnown RBP3.57□□□□□ -1.84
SPG11-211ENST00000558561 IGLV3-9A0A075B6K5 115 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 IQCMA0A1B0GVH7 501 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 DHRS12A0PJE2 317 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 OR6C6A6NF89 314 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 A6NIZ1 184 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 TEX22C9J3V5 150 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 F5H5K5 113 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 H7C417 338 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 ZNF593O00488 134 aaPredicted RBP3.56□□□□□ -1.84
SPG11-211ENST00000558561 ARPC3O15145 178 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 SGCEO43556 437 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 KRT36O76013 467 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 IGHV1-46P01743 117 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 TFF1P04155 84 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 HEXAP06865 529 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 ARSBP15848 533 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 ITGA2P17301 1181 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 SPI1P17947 270 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 MSR1P21757 451 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 IFNA8P32881 189 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 APLNRP35414 380 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 GDI2P50395 445 aaKnown RBP3.56□□□□□ -1.84
SPG11-211ENST00000558561 PRKXP51817 358 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 MNAT1P51948 309 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 RAP1BP61224 184 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 LMO4P61968 165 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 PPP1CBP62140 327 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 RAP1AP62834 184 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 CDK5Q00535 292 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 GALK2Q01415 458 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 TAF11Q15544 211 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 TMEM249Q2WGJ8 235 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 SNAI3Q3KNW1 292 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 KRTAP27-1Q3LI81 207 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 SLC36A2Q495M3 483 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 FAM98BQ52LJ0 330 aaKnown RBP3.56□□□□□ -1.84
SPG11-211ENST00000558561 GPR139Q6DWJ6 353 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 OR2T2Q6IF00 324 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 Q6ZSV7 163 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 RASSF6Q6ZTQ3 369 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 ASRGL1Q7L266 308 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 ZNF367Q7RTV3 350 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 AQP12AQ8IXF9 295 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 CCDC36Q8IYA8 594 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 ZNF786Q8N393 782 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 FGFRL1Q8N441 504 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 RFLNBQ8N5W9 214 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 OR2AE1Q8NHA4 323 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 OR1F12Q8NHA8 337 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 ZNF420Q8TAQ5 688 aaPredicted RBP3.56□□□□□ -1.84
SPG11-211ENST00000558561 SYNPRQ8TBG9 265 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 PYDC1Q8WXC3 89 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 ST8SIA4Q92187 359 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 OTULINQ96BN8 352 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 ASB9Q96DX5 294 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 ZMYND19Q96E35 227 aaPredicted RBP3.56□□□□□ -1.84
SPG11-211ENST00000558561 RNF125Q96EQ8 232 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 SLC29A1Q99808 456 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 PKP2Q99959 881 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 KCNS3Q9BQ31 491 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 RBM4Q9BWF3 364 aaKnown RBP3.56□□□□□ -1.84
SPG11-211ENST00000558561 DGCR6LQ9BY27 220 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 TTTY10Q9BZA0 68 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 OR51V1Q9H2C8 321 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 MAGIXQ9H6Y5 334 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 ZNF442Q9H7R0 627 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 REEP1Q9H902 201 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 CDH20Q9HBT6 801 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 CCNB1IP1Q9NPC3 277 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 KRCC1Q9NPI7 259 aaPredicted RBP3.56□□□□□ -1.84
SPG11-211ENST00000558561 HINT3Q9NQE9 182 aaKnown RBP3.56□□□□□ -1.84
SPG11-211ENST00000558561 ZNF275Q9NSD4 429 aaPredicted RBP3.56□□□□□ -1.84
SPG11-211ENST00000558561 PLEK2Q9NYT0 353 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 SLC25A10Q9UBX3 287 aaPredicted RBP3.56□□□□□ -1.84
SPG11-211ENST00000558561 CYB5R1Q9UHQ9 305 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 TMEM5Q9Y2B1 443 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 PCDHGB5Q9Y5G0 923 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 CDH10Q9Y6N8 788 aa3.56□□□□□ -1.84
SPG11-211ENST00000558561 HIVEP2P31629 2446 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 NSD1Q96L73 2696 aaPredicted RBP3.55□□□□□ -1.84
SPG11-211ENST00000558561 HTR3EA5X5Y0 456 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 CCDC182A6NF36 153 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 A6NLC8 198 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 C12orf71A8MTZ7 269 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 CENPBD1B2RD01 187 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 XKRYO14609 159 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 GNGT2O14610 69 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 SURF4O15260 269 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 MLNRO43193 412 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 PRKYO43930 277 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 SELENOFO60613 162 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 FCN3O75636 299 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 RP2O75695 350 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms