RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 INAFM1C9JVW0 142 aa10.39□□□□□ -0.75
SMAD3-205ENST00000558428 SYT7O43581 403 aa10.39□□□□□ -0.75
SMAD3-205ENST00000558428 ZNF205O95201 554 aa10.39□□□□□ -0.75
SMAD3-205ENST00000558428 TGFAP01135 160 aa10.39□□□□□ -0.75
SMAD3-205ENST00000558428 IGHV2-5P01817 119 aa10.39□□□□□ -0.75
SMAD3-205ENST00000558428 UBCP0CG48 685 aaKnown RBP10.39□□□□□ -0.75
SMAD3-205ENST00000558428 CCL1P22362 96 aa10.39□□□□□ -0.75
SMAD3-205ENST00000558428 DCKP27707 260 aa10.39□□□□□ -0.75
SMAD3-205ENST00000558428 KIR3DL2P43630 455 aa10.39□□□□□ -0.75
SMAD3-205ENST00000558428 CDH15P55291 814 aa10.39□□□□□ -0.75
SMAD3-205ENST00000558428 ZNF154Q13106 437 aa10.39□□□□□ -0.75
SMAD3-205ENST00000558428 ZMYND11Q15326 602 aa10.39□□□□□ -0.75
SMAD3-205ENST00000558428 CEP78Q5JTW2 689 aa10.39□□□□□ -0.75
SMAD3-205ENST00000558428 FAM201AQ5SY85 155 aa10.39□□□□□ -0.75
SMAD3-205ENST00000558428 ZBTB37Q5TC79 503 aa10.39□□□□□ -0.75
SMAD3-205ENST00000558428 FAM166AQ6J272 317 aa10.39□□□□□ -0.75
SMAD3-205ENST00000558428 ZNF826PQ6ZT77 177 aa10.39□□□□□ -0.75
SMAD3-205ENST00000558428 KCTD8Q6ZWB6 473 aa10.39□□□□□ -0.75
SMAD3-205ENST00000558428 WDR86Q86TI4 376 aa10.39□□□□□ -0.75
SMAD3-205ENST00000558428 SPICQ8N5J4 248 aa10.39□□□□□ -0.75
SMAD3-205ENST00000558428 LINC01356Q8N9X3 169 aa10.39□□□□□ -0.75
SMAD3-205ENST00000558428 OR1M1Q8NGA1 313 aa10.39□□□□□ -0.75
SMAD3-205ENST00000558428 OR14K1Q8NGZ2 314 aa10.39□□□□□ -0.75
SMAD3-205ENST00000558428 OR2G2Q8NGZ5 317 aa10.39□□□□□ -0.75
SMAD3-205ENST00000558428 HPSE2Q8WWQ2 592 aa10.39□□□□□ -0.75
SMAD3-205ENST00000558428 RNF166Q96A37 237 aaPredicted RBP10.39□□□□□ -0.75
SMAD3-205ENST00000558428 RAB39BQ96DA2 213 aa10.39□□□□□ -0.75
SMAD3-205ENST00000558428 RNF170Q96K19 258 aa10.39□□□□□ -0.75
SMAD3-205ENST00000558428 HIST1H2AAQ96QV6 131 aa10.39□□□□□ -0.75
SMAD3-205ENST00000558428 ZNF649Q9BS31 505 aa10.39□□□□□ -0.75
SMAD3-205ENST00000558428 JAM3Q9BX67 310 aa10.39□□□□□ -0.75
SMAD3-205ENST00000558428 ISG20L2Q9H9L3 353 aaKnown RBP10.39□□□□□ -0.75
SMAD3-205ENST00000558428 C1orf123Q9NWV4 160 aa10.39□□□□□ -0.75
SMAD3-205ENST00000558428 RNF7Q9UBF6 113 aa10.39□□□□□ -0.75
SMAD3-205ENST00000558428 PCDHB10Q9UN67 800 aa10.39□□□□□ -0.75
SMAD3-205ENST00000558428 NIPBLQ6KC79 2804 aaeCLIP10.39□□□□□ -0.75
SMAD3-205ENST00000558428 SVEP1Q4LDE5 3571 aa10.39□□□□□ -0.75
SMAD3-205ENST00000558428 PPIAL4EA0A075B759 164 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 A6NIN4 97 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 TMEM210A6NLX4 147 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 DHRS7CA6NNS2 312 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 A8MV72 311 aaPredicted RBP10.38□□□□□ -0.75
SMAD3-205ENST00000558428 B4DSR2 109 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 FAM157AC9JC47 383 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 PPIAL4DF5H284 164 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 XPNPEP2O43895 674 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 NRASP01111 189 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 LIMS3P0CW19 117 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 LIMS4P0CW20 117 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 PPIAL4FP0DN26 164 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 MYL12AP19105 171 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 THBS2P35442 1172 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 MDH2P40926 338 aaKnown RBP10.38□□□□□ -0.75
SMAD3-205ENST00000558428 GPM6AP51674 278 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 GBX2P52951 348 aaPredicted RBP10.38□□□□□ -0.75
SMAD3-205ENST00000558428 NANOS3P60323 173 aaKnown RBP10.38□□□□□ -0.75
SMAD3-205ENST00000558428 CSNK2BP67870 215 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 ALKBH1Q13686 389 aaKnown RBP10.38□□□□□ -0.75
SMAD3-205ENST00000558428 TMEM155Q4W5P6 130 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 DMRTC1Q5HYR2 192 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 CLVS2Q5SYC1 327 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 TMEM244Q5VVB8 128 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 PLCXD3Q63HM9 321 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 FDX2Q6P4F2 183 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 IZUMO2Q6UXV1 221 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 Q6ZSR3 168 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 MOB3CQ70IA8 216 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 KRT74Q7RTS7 529 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 LRRC28Q86X40 367 aaPredicted RBP10.38□□□□□ -0.75
SMAD3-205ENST00000558428 RDH10Q8IZV5 341 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 MUC20Q8N307 709 aaPredicted RBP10.38□□□□□ -0.75
SMAD3-205ENST00000558428 KLHL36Q8N4N3 616 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 BOLLQ8N9W6 283 aaKnown RBP10.38□□□□□ -0.75
SMAD3-205ENST00000558428 BPIFB6Q8NFQ5 453 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 FBLIM1Q8WUP2 373 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 OR5P3Q8WZ94 311 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 GGHQ92820 318 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 C1orf159Q96HA4 380 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 TMEM80Q96HE8 168 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 FGF23Q9GZV9 251 aaPredicted RBP10.38□□□□□ -0.75
SMAD3-205ENST00000558428 PLEKHA1Q9HB21 404 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 LPAR2Q9HBW0 351 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 FRRS1LQ9P0K9 344 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 KCNS2Q9ULS6 477 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 DIMT1Q9UNQ2 313 aaKnown RBP10.38□□□□□ -0.75
SMAD3-205ENST00000558428 EXOSC1Q9Y3B2 195 aaKnown RBP10.38□□□□□ -0.75
SMAD3-205ENST00000558428 PPIAL4AQ9Y536 164 aa10.38□□□□□ -0.75
SMAD3-205ENST00000558428 EFCAB10A6NFE3 127 aa10.37□□□□□ -0.75
SMAD3-205ENST00000558428 LMX1BO60663 402 aa10.37□□□□□ -0.75
SMAD3-205ENST00000558428 ZNF12P17014 697 aa10.37□□□□□ -0.75
SMAD3-205ENST00000558428 HSPA13P48723 471 aa10.37□□□□□ -0.75
SMAD3-205ENST00000558428 ETV1P50549 477 aa10.37□□□□□ -0.75
SMAD3-205ENST00000558428 CCR9P51686 369 aa10.37□□□□□ -0.75
SMAD3-205ENST00000558428 GNG3P63215 75 aa10.37□□□□□ -0.75
SMAD3-205ENST00000558428 HOXA4Q00056 320 aaPredicted RBP10.37□□□□□ -0.75
SMAD3-205ENST00000558428 ST3GAL4Q11206 333 aa10.37□□□□□ -0.75
SMAD3-205ENST00000558428 MRPL28Q13084 256 aaKnown RBP10.37□□□□□ -0.75
SMAD3-205ENST00000558428 MED21Q13503 144 aa10.37□□□□□ -0.75
SMAD3-205ENST00000558428 CEACAM21Q3KPI0 293 aa10.37□□□□□ -0.75
SMAD3-205ENST00000558428 LAIR2Q6ISS4 152 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms