RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 WDR62O43379 1518 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 TMEM2Q9UHN6 1383 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 CORTO00230 105 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 KIAA1644Q3SXP7 199 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 PRAMEF20Q5VT98 475 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 IP6K3Q96PC2 410 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 RAB40CQ96S21 281 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 IGKV6-21A0A0C4DH24 114 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 SUOXP51687 545 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 SLC16A14Q7RTX9 510 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 CLDN17P56750 224 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 FAM3AP98173 230 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 NAAAQ02083 359 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 ACSM6Q6P461 480 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 HTR3DQ70Z44 454 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 ARHGAP5-AS1Q96IT6 56 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 C16orf70Q9BSU1 422 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 EMC6Q9BV81 110 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 MRPS2Q9Y399 296 aaKnown RBP3.32□□□□□ -1.88
ATXN3-248ENST00000558190 OR8U8P0C7N1 319 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 RND3P61587 244 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 TSEN54Q7Z6J9 526 aaKnown RBP3.32□□□□□ -1.88
ATXN3-248ENST00000558190 ARHGEF39Q8N4T4 335 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 ZFYVE21Q9BQ24 234 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 Q9N2K0 584 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 SPHK2Q9NRA0 654 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 COL6A6A6NMZ7 2263 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 IGHV3-64DA0A0J9YX35 117 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 OR5G3P0C626 314 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 FABP2P12104 132 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 GALNSP34059 522 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 PTGER4P35408 488 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 CSNK1G2P78368 415 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 AWAT1Q58HT5 328 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 CXorf66Q5JRM2 361 aaPredicted RBP3.32□□□□□ -1.88
ATXN3-248ENST00000558190 SHISA6Q6ZSJ9 500 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 KLHDC9Q8NEP7 349 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 M1APQ8TC57 530 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 WDR92Q96MX6 357 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 ZNF264O43296 627 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 IGHG1P01857 330 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 CKS1BP61024 79 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 PRSS54Q6PEW0 395 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 LYZL2Q7Z4W2 148 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 HSPB8Q9UJY1 196 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 SNAI2O43623 268 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 CSN1S1P47710 185 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 GPR12P47775 334 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 PPP2CBP62714 309 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.32□□□□□ -1.88
ATXN3-248ENST00000558190 ABHD5Q8WTS1 349 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 ASIC5Q9NY37 505 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 BMPR1BO00238 502 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 PCBD1P61457 104 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 BAXQ07812 192 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 CCSMST1Q4G0I0 132 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 BCORP1Q8N888 145 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 SERINC5Q86VE9 423 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 C17orf47Q8NEP4 570 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 RNF2Q99496 336 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 CDH20Q9HBT6 801 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 OBP2BQ9NPH6 170 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 MRPS18AQ9NVS2 196 aaKnown RBP3.32□□□□□ -1.88
ATXN3-248ENST00000558190 VDAC3Q9Y277 283 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 RCL1Q9Y2P8 373 aaKnown RBP3.32□□□□□ -1.88
ATXN3-248ENST00000558190 ABLIM3O94929 683 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 NDUFB4O95168 129 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 TNFSF4P23510 183 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 LSM11P83369 360 aaKnown RBP eCLIP3.31□□□□□ -1.88
ATXN3-248ENST00000558190 CDC20BQ86Y33 519 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 TMEM116Q8NCL8 245 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 PHOSPHO2Q8TCD6 241 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 SLC52A3Q9NQ40 469 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 CMC2Q9NRP2 79 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 DEFB108AA8MXU0 73 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 RPL27P61353 136 aaKnown RBP3.31□□□□□ -1.88
ATXN3-248ENST00000558190 C1orf140Q5VVS0 124 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 PTPMT1Q8WUK0 201 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-248ENST00000558190 IGSF21Q96ID5 467 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 HOXB3P14651 431 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-248ENST00000558190 P2RY1P47900 373 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 COMPP49747 757 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-248ENST00000558190 ADPRHP54922 357 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 TCTAP57738 103 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 DMKNQ6E0U4 476 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-248ENST00000558190 OVCH2Q7RTZ1 564 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 AMER3Q8N944 861 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 WDR61Q9GZS3 305 aaKnown RBP3.31□□□□□ -1.88
ATXN3-248ENST00000558190 ADGBQ8N7X0 1667 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 CBR3O75828 277 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 TMIGD3P0DMS9 266 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-248ENST00000558190 RPL11P62913 178 aaKnown RBP3.31□□□□□ -1.88
ATXN3-248ENST00000558190 UBE2V1Q13404 147 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 SAMD13Q5VXD3 122 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 ACY3Q96HD9 319 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 OR4C12Q96R67 309 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 SLX1AQ9BQ83 275 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 LAT2Q9GZY6 243 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 TXNRD2Q9NNW7 524 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 ZNF732B4DXR9 585 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms