RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 G3V4G9 280 aa2□□□□□ -2.09
SPG11-206ENST00000558093 H3BNH8 94 aa2□□□□□ -2.09
SPG11-206ENST00000558093 GFYI3L273 518 aa2□□□□□ -2.09
SPG11-206ENST00000558093 PSMD12O00232 456 aaPredicted RBP2□□□□□ -2.09
SPG11-206ENST00000558093 SIRPB1O00241 398 aa2□□□□□ -2.09
SPG11-206ENST00000558093 PLPP1O14494 284 aa2□□□□□ -2.09
SPG11-206ENST00000558093 AZIN1O14977 448 aa2□□□□□ -2.09
SPG11-206ENST00000558093 ACOX3O15254 700 aa2□□□□□ -2.09
SPG11-206ENST00000558093 TCAPO15273 167 aa2□□□□□ -2.09
SPG11-206ENST00000558093 RGS16O15492 202 aaPredicted RBP2□□□□□ -2.09
SPG11-206ENST00000558093 TAPBPO15533 448 aa2□□□□□ -2.09
SPG11-206ENST00000558093 PRKAB2O43741 272 aa2□□□□□ -2.09
SPG11-206ENST00000558093 RAD1O60671 282 aa2□□□□□ -2.09
SPG11-206ENST00000558093 TOM1O60784 492 aa2□□□□□ -2.09
SPG11-206ENST00000558093 ATP5LO75964 103 aa2□□□□□ -2.09
SPG11-206ENST00000558093 MPZL1O95297 269 aa2□□□□□ -2.09
SPG11-206ENST00000558093 PLEKHA8P1O95397 391 aa2□□□□□ -2.09
SPG11-206ENST00000558093 CNIH1O95406 144 aa2□□□□□ -2.09
SPG11-206ENST00000558093 TDP2O95551 362 aa2□□□□□ -2.09
SPG11-206ENST00000558093 ATP6V1G2O95670 118 aa2□□□□□ -2.09
SPG11-206ENST00000558093 APOC1P02654 83 aa2□□□□□ -2.09
SPG11-206ENST00000558093 ORM1P02763 201 aa2□□□□□ -2.09
SPG11-206ENST00000558093 CDK1P06493 297 aa2□□□□□ -2.09
SPG11-206ENST00000558093 CRHP06850 196 aa2□□□□□ -2.09
SPG11-206ENST00000558093 RBMY1CP0DJD4 496 aa2□□□□□ -2.09
SPG11-206ENST00000558093 ADRB3P13945 408 aa2□□□□□ -2.09
SPG11-206ENST00000558093 GFAPP14136 432 aa2□□□□□ -2.09
SPG11-206ENST00000558093 UCHL3P15374 230 aa2□□□□□ -2.09
SPG11-206ENST00000558093 KCNE1P15382 129 aa2□□□□□ -2.09
SPG11-206ENST00000558093 GCAP28676 217 aa2□□□□□ -2.09
SPG11-206ENST00000558093 MAGEA12P43365 314 aa2□□□□□ -2.09
SPG11-206ENST00000558093 SLCO1A2P46721 670 aa2□□□□□ -2.09
SPG11-206ENST00000558093 CX3CR1P49238 355 aa2□□□□□ -2.09
SPG11-206ENST00000558093 CYB561P49447 251 aa2□□□□□ -2.09
SPG11-206ENST00000558093 TMED10P49755 219 aaKnown RBP2□□□□□ -2.09
SPG11-206ENST00000558093 CCR6P51684 374 aa2□□□□□ -2.09
SPG11-206ENST00000558093 CLDN12P56749 244 aa2□□□□□ -2.09
SPG11-206ENST00000558093 OR4D2P58180 307 aa2□□□□□ -2.09
SPG11-206ENST00000558093 RHOAP61586 193 aa2□□□□□ -2.09
SPG11-206ENST00000558093 AP1S1P61966 158 aa2□□□□□ -2.09
SPG11-206ENST00000558093 RANP62826 216 aaKnown RBP2□□□□□ -2.09
SPG11-206ENST00000558093 KLRB1Q12918 225 aa2□□□□□ -2.09
SPG11-206ENST00000558093 SRSF6Q13247 344 aaKnown RBP2□□□□□ -2.09
SPG11-206ENST00000558093 SKP2Q13309 424 aa2□□□□□ -2.09
SPG11-206ENST00000558093 GRB7Q14451 532 aa2□□□□□ -2.09
SPG11-206ENST00000558093 PSG5Q15238 335 aa2□□□□□ -2.09
SPG11-206ENST00000558093 TOMM34Q15785 309 aaPredicted RBP2□□□□□ -2.09
SPG11-206ENST00000558093 ZNF77Q15935 545 aa2□□□□□ -2.09
SPG11-206ENST00000558093 RPEL1Q2QD12 228 aa2□□□□□ -2.09
SPG11-206ENST00000558093 PDZD11Q5EBL8 140 aa2□□□□□ -2.09
SPG11-206ENST00000558093 OR2G6Q5TZ20 316 aa2□□□□□ -2.09
SPG11-206ENST00000558093 SYPL2Q5VXT5 272 aa2□□□□□ -2.09
SPG11-206ENST00000558093 TRIQKQ629K1 86 aa2□□□□□ -2.09
SPG11-206ENST00000558093 LPCAT4Q643R3 524 aa2□□□□□ -2.09
SPG11-206ENST00000558093 SAXO2Q658L1 398 aa2□□□□□ -2.09
SPG11-206ENST00000558093 FAM45BPQ6NSW5 357 aa2□□□□□ -2.09
SPG11-206ENST00000558093 FAHD1Q6P587 224 aa2□□□□□ -2.09
SPG11-206ENST00000558093 DNM1P34Q6PK57 102 aa2□□□□□ -2.09
SPG11-206ENST00000558093 C5orf46Q6UWT4 87 aa2□□□□□ -2.09
SPG11-206ENST00000558093 DRAM2Q6UX65 266 aa2□□□□□ -2.09
SPG11-206ENST00000558093 LINC00336Q6ZUF6 198 aa2□□□□□ -2.09
SPG11-206ENST00000558093 COX15Q7KZN9 410 aa2□□□□□ -2.09
SPG11-206ENST00000558093 SSX6Q7RTT6 188 aa2□□□□□ -2.09
SPG11-206ENST00000558093 OR2W3Q7Z3T1 314 aa2□□□□□ -2.09
SPG11-206ENST00000558093 HORMAD1Q86X24 394 aa2□□□□□ -2.09
SPG11-206ENST00000558093 APRG1Q8IVJ8 170 aa2□□□□□ -2.09
SPG11-206ENST00000558093 ZNF547Q8IVP9 402 aa2□□□□□ -2.09
SPG11-206ENST00000558093 SLC35F2Q8IXU6 374 aa2□□□□□ -2.09
SPG11-206ENST00000558093 CMTM1Q8IZ96 169 aa2□□□□□ -2.09
SPG11-206ENST00000558093 PNKDQ8N490 385 aa2□□□□□ -2.09
SPG11-206ENST00000558093 KIF2BQ8N4N8 673 aa2□□□□□ -2.09
SPG11-206ENST00000558093 LFNGQ8NES3 379 aa2□□□□□ -2.09
SPG11-206ENST00000558093 OR10W1Q8NGF6 305 aa2□□□□□ -2.09
SPG11-206ENST00000558093 OR2Y1Q8NGV0 311 aa2□□□□□ -2.09
SPG11-206ENST00000558093 OR5AK3PQ8NH89 298 aa2□□□□□ -2.09
SPG11-206ENST00000558093 LYPD6BQ8NI32 183 aa2□□□□□ -2.09
SPG11-206ENST00000558093 RNASE11Q8TAA1 199 aaKnown RBP2□□□□□ -2.09
SPG11-206ENST00000558093 TBRG4Q969Z0 631 aaKnown RBP eCLIP2□□□□□ -2.09
SPG11-206ENST00000558093 YIPF6Q96EC8 236 aa2□□□□□ -2.09
SPG11-206ENST00000558093 ANKRD36BP1Q96IX9 119 aa2□□□□□ -2.09
SPG11-206ENST00000558093 ITCHQ96J02 903 aa2□□□□□ -2.09
SPG11-206ENST00000558093 FOPNLQ96NB1 174 aa2□□□□□ -2.09
SPG11-206ENST00000558093 KCNA7Q96RP8 456 aa2□□□□□ -2.09
SPG11-206ENST00000558093 CNN2Q99439 309 aaKnown RBP2□□□□□ -2.09
SPG11-206ENST00000558093 STACQ99469 402 aa2□□□□□ -2.09
SPG11-206ENST00000558093 TSC22D3Q99576 134 aa2□□□□□ -2.09
SPG11-206ENST00000558093 ATP5SQ99766 215 aa2□□□□□ -2.09
SPG11-206ENST00000558093 SLC6A7Q99884 636 aa2□□□□□ -2.09
SPG11-206ENST00000558093 NRIP2Q9BQI9 281 aa2□□□□□ -2.09
SPG11-206ENST00000558093 TIPINQ9BVW5 301 aa2□□□□□ -2.09
SPG11-206ENST00000558093 NUDT9Q9BW91 350 aa2□□□□□ -2.09
SPG11-206ENST00000558093 MRPS26Q9BYN8 205 aaKnown RBP2□□□□□ -2.09
SPG11-206ENST00000558093 ZYG11BQ9C0D3 744 aa2□□□□□ -2.09
SPG11-206ENST00000558093 NAT10Q9H0A0 1025 aaKnown RBP2□□□□□ -2.09
SPG11-206ENST00000558093 ALX4Q9H161 411 aaPredicted RBP2□□□□□ -2.09
SPG11-206ENST00000558093 DEFB129Q9H1M3 183 aa2□□□□□ -2.09
SPG11-206ENST00000558093 PPA2Q9H2U2 334 aa2□□□□□ -2.09
SPG11-206ENST00000558093 ZSCAN16Q9H4T2 348 aaPredicted RBP2□□□□□ -2.09
SPG11-206ENST00000558093 ZNF430Q9H8G1 570 aaPredicted RBP2□□□□□ -2.09
SPG11-206ENST00000558093 RHOFQ9HBH0 211 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms