RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 ZNF404Q494X3 552 aa14.44□□□□□ -0.1
SNX1-203ENST00000558040 MEX3BQ6ZN04 569 aaKnown RBP14.44□□□□□ -0.1
SNX1-203ENST00000558040 LHFPL2Q6ZUX7 228 aa14.44□□□□□ -0.1
SNX1-203ENST00000558040 NR2C2APQ86WQ0 139 aa14.44□□□□□ -0.1
SNX1-203ENST00000558040 JAGN1Q8N5M9 183 aa14.44□□□□□ -0.1
SNX1-203ENST00000558040 DNAAF1Q8NEP3 725 aa14.44□□□□□ -0.1
SNX1-203ENST00000558040 OR52N4Q8NGI2 321 aa14.44□□□□□ -0.1
SNX1-203ENST00000558040 KCTD12Q96CX2 325 aaKnown RBP14.44□□□□□ -0.1
SNX1-203ENST00000558040 SORCS2Q96PQ0 1159 aa14.44□□□□□ -0.1
SNX1-203ENST00000558040 SLC30A2Q9BRI3 323 aa14.44□□□□□ -0.1
SNX1-203ENST00000558040 SLIRPQ9GZT3 109 aaKnown RBP14.44□□□□□ -0.1
SNX1-203ENST00000558040 METTL17Q9H7H0 456 aaPredicted RBP14.44□□□□□ -0.1
SNX1-203ENST00000558040 PLGRKTQ9HBL7 147 aa14.44□□□□□ -0.1
SNX1-203ENST00000558040 CGGBP1Q9UFW8 167 aaPredicted RBP14.44□□□□□ -0.1
SNX1-203ENST00000558040 GPR160Q9UJ42 338 aa14.44□□□□□ -0.1
SNX1-203ENST00000558040 ZNF462Q96JM2 2506 aa14.43□□□□□ -0.1
SNX1-203ENST00000558040 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.43□□□□□ -0.1
SNX1-203ENST00000558040 IFITM5A6NNB3 132 aa14.43□□□□□ -0.1
SNX1-203ENST00000558040 PRSS44E7EML9 344 aa14.43□□□□□ -0.1
SNX1-203ENST00000558040 SIAH2O43255 324 aa14.43□□□□□ -0.1
SNX1-203ENST00000558040 RNF224P0DH78 156 aa14.43□□□□□ -0.1
SNX1-203ENST00000558040 ZNF93P35789 620 aaPredicted RBP14.43□□□□□ -0.1
SNX1-203ENST00000558040 FUT6P51993 359 aa14.43□□□□□ -0.1
SNX1-203ENST00000558040 CEACAM21Q3KPI0 293 aa14.43□□□□□ -0.1
SNX1-203ENST00000558040 IDNKQ5T6J7 187 aa14.43□□□□□ -0.1
SNX1-203ENST00000558040 PNLDC1Q8NA58 520 aaKnown RBP14.43□□□□□ -0.1
SNX1-203ENST00000558040 MCFD2Q8NI22 146 aa14.43□□□□□ -0.1
SNX1-203ENST00000558040 NPRL2Q8WTW4 380 aa14.43□□□□□ -0.1
SNX1-203ENST00000558040 ACOT12Q8WYK0 555 aa14.43□□□□□ -0.1
SNX1-203ENST00000558040 BORCS8Q96FH0 119 aa14.43□□□□□ -0.1
SNX1-203ENST00000558040 GFI1Q99684 422 aa14.43□□□□□ -0.1
SNX1-203ENST00000558040 SYT3Q9BQG1 590 aa14.43□□□□□ -0.1
SNX1-203ENST00000558040 UQCC2Q9BRT2 126 aa14.43□□□□□ -0.1
SNX1-203ENST00000558040 TMEM204Q9BSN7 226 aa14.43□□□□□ -0.1
SNX1-203ENST00000558040 MRI1Q9BV20 369 aa14.43□□□□□ -0.1
SNX1-203ENST00000558040 BARHL1Q9BZE3 327 aa14.43□□□□□ -0.1
SNX1-203ENST00000558040 TMEM100Q9NV29 134 aa14.43□□□□□ -0.1
SNX1-203ENST00000558040 DAPK2Q9UIK4 370 aa14.43□□□□□ -0.1
SNX1-203ENST00000558040 A3GALT2U3KPV4 340 aa14.43□□□□□ -0.1
SNX1-203ENST00000558040 PLSCR5A0PG75 271 aa14.42□□□□□ -0.1
SNX1-203ENST00000558040 OR5B21A6NL26 309 aa14.42□□□□□ -0.1
SNX1-203ENST00000558040 SLC17A2O00624 439 aa14.42□□□□□ -0.1
SNX1-203ENST00000558040 OR4A8P0C604 315 aa14.42□□□□□ -0.1
SNX1-203ENST00000558040 CA6P23280 308 aa14.42□□□□□ -0.1
SNX1-203ENST00000558040 CFPP27918 469 aa14.42□□□□□ -0.1
SNX1-203ENST00000558040 RBP2P50120 134 aa14.42□□□□□ -0.1
SNX1-203ENST00000558040 ATP1B3P54709 279 aa14.42□□□□□ -0.1
SNX1-203ENST00000558040 SRSF1Q07955 248 aaKnown RBP eCLIP14.42□□□□□ -0.1
SNX1-203ENST00000558040 DYNC1I2Q13409 638 aaKnown RBP14.42□□□□□ -0.1
SNX1-203ENST00000558040 DAZAP2Q15038 168 aaPredicted RBP14.42□□□□□ -0.1
SNX1-203ENST00000558040 RAB11BQ15907 218 aa14.42□□□□□ -0.1
SNX1-203ENST00000558040 MSMPQ1L6U9 139 aa14.42□□□□□ -0.1
SNX1-203ENST00000558040 ALKBH6Q3KRA9 238 aa14.42□□□□□ -0.1
SNX1-203ENST00000558040 MZT2AQ6P582 158 aa14.42□□□□□ -0.1
SNX1-203ENST00000558040 OR5A2Q8NGI9 324 aa14.42□□□□□ -0.1
SNX1-203ENST00000558040 OR6M1Q8NGM8 313 aa14.42□□□□□ -0.1
SNX1-203ENST00000558040 OR13G1Q8NGZ3 307 aa14.42□□□□□ -0.1
SNX1-203ENST00000558040 OR8S1Q8NH09 359 aa14.42□□□□□ -0.1
SNX1-203ENST00000558040 TRMT10AQ8TBZ6 339 aaKnown RBP14.42□□□□□ -0.1
SNX1-203ENST00000558040 GPER1Q99527 375 aa14.42□□□□□ -0.1
SNX1-203ENST00000558040 MICU1Q9BPX6 476 aa14.42□□□□□ -0.1
SNX1-203ENST00000558040 ADAT1Q9BUB4 502 aaKnown RBP14.42□□□□□ -0.1
SNX1-203ENST00000558040 MRPL37Q9BZE1 423 aaKnown RBP14.42□□□□□ -0.1
SNX1-203ENST00000558040 PLK3Q9H4B4 646 aa14.42□□□□□ -0.1
SNX1-203ENST00000558040 CYSLTR2Q9NS75 346 aa14.42□□□□□ -0.1
SNX1-203ENST00000558040 PLEKHB1Q9UF11 243 aaPredicted RBP14.42□□□□□ -0.1
SNX1-203ENST00000558040 STEAP1Q9UHE8 339 aa14.42□□□□□ -0.1
SNX1-203ENST00000558040 A0A075B6Q4 140 aa14.41□□□□□ -0.1
SNX1-203ENST00000558040 FAM230AA0A1W2PPH8 454 aa14.41□□□□□ -0.1
SNX1-203ENST00000558040 CLEC18AA5D8T8 446 aa14.41□□□□□ -0.1
SNX1-203ENST00000558040 E7EQL1 145 aa14.41□□□□□ -0.1
SNX1-203ENST00000558040 LILRA1O75019 489 aa14.41□□□□□ -0.1
SNX1-203ENST00000558040 CD37P11049 281 aa14.41□□□□□ -0.1
SNX1-203ENST00000558040 LOXP28300 417 aaPredicted RBP14.41□□□□□ -0.1
SNX1-203ENST00000558040 HTR2CP28335 458 aa14.41□□□□□ -0.1
SNX1-203ENST00000558040 EVX1P49640 407 aa14.41□□□□□ -0.1
SNX1-203ENST00000558040 CAPZA1P52907 286 aa14.41□□□□□ -0.1
SNX1-203ENST00000558040 MTCP1P56278 107 aa14.41□□□□□ -0.1
SNX1-203ENST00000558040 MZT1Q08AG7 82 aa14.41□□□□□ -0.1
SNX1-203ENST00000558040 RIN1Q13671 783 aa14.41□□□□□ -0.1
SNX1-203ENST00000558040 OR8G1Q15617 311 aa14.41□□□□□ -0.1
SNX1-203ENST00000558040 KISS1Q15726 138 aa14.41□□□□□ -0.1
SNX1-203ENST00000558040 ADIPOQQ15848 244 aa14.41□□□□□ -0.1
SNX1-203ENST00000558040 ZNF672Q499Z4 452 aaPredicted RBP14.41□□□□□ -0.1
SNX1-203ENST00000558040 TMEM255AQ5JRV8 349 aa14.41□□□□□ -0.1
SNX1-203ENST00000558040 C1orf100Q5SVJ3 147 aa14.41□□□□□ -0.1
SNX1-203ENST00000558040 HES5Q5TA89 166 aa14.41□□□□□ -0.1
SNX1-203ENST00000558040 CLEC18BQ6UXF7 455 aa14.41□□□□□ -0.1
SNX1-203ENST00000558040 LRP11Q86VZ4 500 aa14.41□□□□□ -0.1
SNX1-203ENST00000558040 SPERTQ8NA61 448 aa14.41□□□□□ -0.1
SNX1-203ENST00000558040 ACBD4Q8NC06 268 aa14.41□□□□□ -0.1
SNX1-203ENST00000558040 CLEC18CQ8NCF0 446 aa14.41□□□□□ -0.1
SNX1-203ENST00000558040 ZNF671Q8TAW3 534 aa14.41□□□□□ -0.1
SNX1-203ENST00000558040 OR5P3Q8WZ94 311 aa14.41□□□□□ -0.1
SNX1-203ENST00000558040 ITPKCQ96DU7 683 aa14.41□□□□□ -0.1
SNX1-203ENST00000558040 HS3ST6Q96QI5 342 aa14.41□□□□□ -0.1
SNX1-203ENST00000558040 SPOCK3Q9BQ16 436 aa14.41□□□□□ -0.1
SNX1-203ENST00000558040 RTL8AQ9BWD3 113 aa14.41□□□□□ -0.1
SNX1-203ENST00000558040 NXF2Q9GZY0 626 aaKnown RBP14.41□□□□□ -0.1
SNX1-203ENST00000558040 MMP27Q9H306 513 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms