RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 MICU1Q9BPX6 476 aa21.58■■□□□ 1.05
SMAD6-202ENST00000557916 PLEKHA1Q9HB21 404 aa21.58■■□□□ 1.05
SMAD6-202ENST00000557916 TMEM106BQ9NUM4 274 aa21.58■■□□□ 1.05
SMAD6-202ENST00000557916 ERVK-18Q9QC07 812 aa21.58■■□□□ 1.05
SMAD6-202ENST00000557916 ZNF469Q96JG9 3925 aaPredicted RBP21.57■■□□□ 1.04
SMAD6-202ENST00000557916 A6NIN4 97 aa21.57■■□□□ 1.04
SMAD6-202ENST00000557916 CLDN25C9JDP6 229 aa21.57■■□□□ 1.04
SMAD6-202ENST00000557916 SMAD7O15105 426 aaKnown RBP21.57■■□□□ 1.04
SMAD6-202ENST00000557916 PTBP3O95758 552 aaKnown RBP21.57■■□□□ 1.04
SMAD6-202ENST00000557916 ZNF12P17014 697 aa21.57■■□□□ 1.04
SMAD6-202ENST00000557916 HNRNPA0Q13151 305 aaKnown RBP21.57■■□□□ 1.04
SMAD6-202ENST00000557916 RNLSQ5VYX0 342 aa21.57■■□□□ 1.04
SMAD6-202ENST00000557916 XAF1Q6GPH4 301 aa21.57■■□□□ 1.04
SMAD6-202ENST00000557916 NANOGP1Q8N7R0 232 aa21.57■■□□□ 1.04
SMAD6-202ENST00000557916 ZNF420Q8TAQ5 688 aaPredicted RBP21.57■■□□□ 1.04
SMAD6-202ENST00000557916 OR5P3Q8WZ94 311 aa21.57■■□□□ 1.04
SMAD6-202ENST00000557916 ERGIC1Q969X5 290 aa21.57■■□□□ 1.04
SMAD6-202ENST00000557916 C18orf12Q96KH6 178 aa21.57■■□□□ 1.04
SMAD6-202ENST00000557916 HIST1H2AAQ96QV6 131 aa21.57■■□□□ 1.04
SMAD6-202ENST00000557916 CDCA4Q9BXL8 241 aa21.57■■□□□ 1.04
SMAD6-202ENST00000557916 TRIM36Q9NQ86 728 aa21.57■■□□□ 1.04
SMAD6-202ENST00000557916 UFSP2Q9NUQ7 469 aa21.57■■□□□ 1.04
SMAD6-202ENST00000557916 DCAF16Q9NXF7 216 aa21.57■■□□□ 1.04
SMAD6-202ENST00000557916 A0A096LNT2 108 aa21.56■■□□□ 1.04
SMAD6-202ENST00000557916 TMEM212A6NML5 194 aa21.56■■□□□ 1.04
SMAD6-202ENST00000557916 IFNL4K9M1U5 179 aa21.56■■□□□ 1.04
SMAD6-202ENST00000557916 ZFPL1O95159 310 aa21.56■■□□□ 1.04
SMAD6-202ENST00000557916 GRPP07492 148 aa21.56■■□□□ 1.04
SMAD6-202ENST00000557916 RBMXP38159 391 aaKnown RBP21.56■■□□□ 1.04
SMAD6-202ENST00000557916 MPPED2Q15777 294 aa21.56■■□□□ 1.04
SMAD6-202ENST00000557916 CLVS2Q5SYC1 327 aa21.56■■□□□ 1.04
SMAD6-202ENST00000557916 MAPK1IP1LQ8NDC0 245 aa21.56■■□□□ 1.04
SMAD6-202ENST00000557916 OR5AK2Q8NH90 309 aa21.56■■□□□ 1.04
SMAD6-202ENST00000557916 COX4I2Q96KJ9 171 aa21.56■■□□□ 1.04
SMAD6-202ENST00000557916 PDCD1LG2Q9BQ51 273 aa21.56■■□□□ 1.04
SMAD6-202ENST00000557916 RTL8AQ9BWD3 113 aa21.56■■□□□ 1.04
SMAD6-202ENST00000557916 COMMD4Q9H0A8 199 aa21.56■■□□□ 1.04
SMAD6-202ENST00000557916 BLOC1S6Q9UL45 172 aa21.56■■□□□ 1.04
SMAD6-202ENST00000557916 HHLA2Q9UM44 414 aa21.56■■□□□ 1.04
SMAD6-202ENST00000557916 RGS10O43665 173 aa21.55■■□□□ 1.04
SMAD6-202ENST00000557916 LMX1BO60663 402 aa21.55■■□□□ 1.04
SMAD6-202ENST00000557916 LALBAP00709 142 aa21.55■■□□□ 1.04
SMAD6-202ENST00000557916 NRASP01111 189 aa21.55■■□□□ 1.04
SMAD6-202ENST00000557916 USF1P22415 310 aaPredicted RBP21.55■■□□□ 1.04
SMAD6-202ENST00000557916 PMELP40967 661 aa21.55■■□□□ 1.04
SMAD6-202ENST00000557916 CDH15P55291 814 aa21.55■■□□□ 1.04
SMAD6-202ENST00000557916 WNT4P56705 351 aa21.55■■□□□ 1.04
SMAD6-202ENST00000557916 CDK5R1Q15078 307 aa21.55■■□□□ 1.04
SMAD6-202ENST00000557916 MOB3CQ70IA8 216 aa21.55■■□□□ 1.04
SMAD6-202ENST00000557916 OR10AC1Q8NH08 325 aa21.55■■□□□ 1.04
SMAD6-202ENST00000557916 RAB1CQ92928 201 aa21.55■■□□□ 1.04
SMAD6-202ENST00000557916 TIMD4Q96H15 378 aa21.55■■□□□ 1.04
SMAD6-202ENST00000557916 RNF170Q96K19 258 aa21.55■■□□□ 1.04
SMAD6-202ENST00000557916 FN3KRPQ9HA64 309 aa21.55■■□□□ 1.04
SMAD6-202ENST00000557916 DYSFO75923 2080 aa21.55■■□□□ 1.04
SMAD6-202ENST00000557916 RPSAP08865 295 aaKnown RBP21.55■■□□□ 1.04
SMAD6-202ENST00000557916 LOXL1Q08397 574 aaPredicted RBP21.55■■□□□ 1.04
SMAD6-202ENST00000557916 CEACAM21Q3KPI0 293 aa21.55■■□□□ 1.04
SMAD6-202ENST00000557916 CEP78Q5JTW2 689 aa21.55■■□□□ 1.04
SMAD6-202ENST00000557916 AVPI1Q5T686 147 aa21.55■■□□□ 1.04
SMAD6-202ENST00000557916 PLCXD3Q63HM9 321 aa21.55■■□□□ 1.04
SMAD6-202ENST00000557916 TMEM42Q69YG0 159 aa21.55■■□□□ 1.04
SMAD6-202ENST00000557916 PEG10Q86TG7 708 aaKnown RBP21.55■■□□□ 1.04
SMAD6-202ENST00000557916 WDR86Q86TI4 376 aa21.55■■□□□ 1.04
SMAD6-202ENST00000557916 OR1M1Q8NGA1 313 aa21.55■■□□□ 1.04
SMAD6-202ENST00000557916 Q8TCH9 128 aa21.55■■□□□ 1.04
SMAD6-202ENST00000557916 HPSE2Q8WWQ2 592 aa21.55■■□□□ 1.04
SMAD6-202ENST00000557916 MND1Q9BWT6 205 aa21.55■■□□□ 1.04
SMAD6-202ENST00000557916 WIPI2Q9Y4P8 454 aa21.55■■□□□ 1.04
SMAD6-202ENST00000557916 SIRT4Q9Y6E7 314 aaPredicted RBP21.55■■□□□ 1.04
SMAD6-202ENST00000557916 IGHV4-61A0A0C4DH41 118 aa21.54■■□□□ 1.04
SMAD6-202ENST00000557916 LRRC30A6NM36 301 aa21.54■■□□□ 1.04
SMAD6-202ENST00000557916 TMEM178BH3BS89 294 aa21.54■■□□□ 1.04
SMAD6-202ENST00000557916 OGG1O15527 345 aa21.54■■□□□ 1.04
SMAD6-202ENST00000557916 FOSL1P15407 271 aa21.54■■□□□ 1.04
SMAD6-202ENST00000557916 THBS2P35442 1172 aa21.54■■□□□ 1.04
SMAD6-202ENST00000557916 ZNF181Q2M3W8 571 aa21.54■■□□□ 1.04
SMAD6-202ENST00000557916 DMRTC1Q5HYR2 192 aa21.54■■□□□ 1.04
SMAD6-202ENST00000557916 KCTD8Q6ZWB6 473 aa21.54■■□□□ 1.04
SMAD6-202ENST00000557916 OR51A4Q8NGJ6 313 aa21.54■■□□□ 1.04
SMAD6-202ENST00000557916 OR11L1Q8NGX0 322 aa21.54■■□□□ 1.04
SMAD6-202ENST00000557916 HPS1Q92902 700 aa21.54■■□□□ 1.04
SMAD6-202ENST00000557916 C10orf35Q96D05 121 aa21.54■■□□□ 1.04
SMAD6-202ENST00000557916 CCDC90BQ9GZT6 254 aa21.54■■□□□ 1.04
SMAD6-202ENST00000557916 FGF23Q9GZV9 251 aaPredicted RBP21.54■■□□□ 1.04
SMAD6-202ENST00000557916 GPR173Q9NS66 373 aa21.54■■□□□ 1.04
SMAD6-202ENST00000557916 ACANP16112 2415 aa21.54■■□□□ 1.04
SMAD6-202ENST00000557916 TANC2Q9HCD6 1990 aa21.53■■□□□ 1.04
SMAD6-202ENST00000557916 A6NLC8 198 aa21.53■■□□□ 1.04
SMAD6-202ENST00000557916 CYB5R3P00387 301 aaPredicted RBP21.53■■□□□ 1.04
SMAD6-202ENST00000557916 MT-ND2P03891 347 aa21.53■■□□□ 1.04
SMAD6-202ENST00000557916 INHBBP09529 407 aa21.53■■□□□ 1.04
SMAD6-202ENST00000557916 EEF1B2P24534 225 aaKnown RBP21.53■■□□□ 1.04
SMAD6-202ENST00000557916 IRF3Q14653 427 aa21.53■■□□□ 1.04
SMAD6-202ENST00000557916 OR5A2Q8NGI9 324 aa21.53■■□□□ 1.04
SMAD6-202ENST00000557916 OR13C3Q8NGS6 347 aa21.53■■□□□ 1.04
SMAD6-202ENST00000557916 RPS4Y2Q8TD47 263 aa21.53■■□□□ 1.04
SMAD6-202ENST00000557916 C1orf123Q9NWV4 160 aa21.53■■□□□ 1.04
SMAD6-202ENST00000557916 NPTNQ9Y639 398 aa21.53■■□□□ 1.04
SMAD6-202ENST00000557916 F8P00451 2351 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms