RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 PGAM4Q8N0Y7 254 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 ZFP82Q8N141 532 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 STX19Q8N4C7 294 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 PACRGLQ8N7B6 248 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 LRRC52Q8N7C0 313 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 LRRC75AQ8NAA5 344 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 OR10X1Q8NGY0 326 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 OR4Q3Q8NH05 313 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 MRAPQ8TCY5 172 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 C16orf78Q8WTQ4 265 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 RPEQ96AT9 228 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 C18orf12Q96KH6 178 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 JSRP1Q96MG2 331 aaPredicted RBP1.3□□□□□ -2.2
HIF1A-212ENST00000557538 GLT1D1Q96MS3 346 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF184Q99676 751 aaPredicted RBP1.3□□□□□ -2.2
HIF1A-212ENST00000557538 C7orf50Q9BRJ6 194 aaKnown RBP1.3□□□□□ -2.2
HIF1A-212ENST00000557538 TCEAL7Q9BRU2 100 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 DCSTAMPQ9H295 470 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 TMBIM4Q9HC24 238 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 NIT2Q9NQR4 276 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 PLSCR3Q9NRY6 295 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 RASL12Q9NYN1 266 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 CD274Q9NZQ7 290 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 CCDC59Q9P031 241 aaKnown RBP1.3□□□□□ -2.2
HIF1A-212ENST00000557538 COPS7AQ9UBW8 275 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 MOB4Q9Y3A3 225 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 WDR45Q9Y484 360 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 ALG5Q9Y673 324 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 CDC42BPGQ6DT37 1551 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 DIP2BQ9P265 1576 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 ABCC2Q92887 1545 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 UBR2Q8IWV8 1755 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 SYNJ1O43426 1573 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 A0A1B0GTI1 187 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 IGSF23A1L1A6 192 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 SAGE2PA6NJ88 616 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 CDX4O14627 284 aaPredicted RBP1.29□□□□□ -2.2
HIF1A-212ENST00000557538 CCL25O15444 150 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 HCRTR1O43613 425 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 CHMP2AO43633 222 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 DCTN3O75935 186 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 GAPDHP04406 335 aaKnown RBP1.29□□□□□ -2.2
HIF1A-212ENST00000557538 KRTAP1-4P0C5Y4 121 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 OR8U8P0C7N1 319 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 CD79AP11912 226 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF44P15621 663 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 CD1DP15813 335 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 PAICSP22234 425 aaKnown RBP1.29□□□□□ -2.2
HIF1A-212ENST00000557538 KDELR1P24390 212 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 FMO3P31513 532 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 CDKN2DP55273 166 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 C21orf59P57076 290 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 MAXP61244 160 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 CHRNB3Q05901 458 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 IL18R1Q13478 541 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 GK3PQ14409 553 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 TRAM1Q15629 374 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 TRIP10Q15642 601 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 ISXQ2M1V0 245 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 EXOC3L2Q2M3D2 409 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 MORN2Q502X0 79 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 CARD16Q5EG05 197 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 NHLRC3Q5JS37 347 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 LGSNQ5TDP6 509 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 ASPHD2Q6ICH7 369 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 CGB2Q6NT52 195 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 FAM71F2Q6NXP2 309 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 LUZP2Q86TE4 346 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 PARGQ86W56 976 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 SERPINA9Q86WD7 417 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 IFNEQ86WN2 208 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 TCTE3Q8IZS6 198 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 SPAG16Q8N0X2 631 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 SPEM1Q8N4L4 309 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 UBL4BQ8N7F7 174 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 FBXL13Q8NEE6 735 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 OR2Z1Q8NG97 314 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 OR10W1Q8NGF6 305 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 OR6K3Q8NGY3 331 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 OR1P1Q8NH06 330 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 DYNC2LI1Q8TCX1 351 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 ABHD3Q8WU67 409 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 DCAKDQ8WVC6 231 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 SPRYD4Q8WW59 207 aaPredicted RBP1.29□□□□□ -2.2
HIF1A-212ENST00000557538 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.29□□□□□ -2.22e-8■■■■■ 39.2
HIF1A-212ENST00000557538 CREB3L1Q96BA8 519 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 FAF2Q96CS3 445 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 MS4A14Q96JA4 679 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 BTN2A3PQ96KV6 586 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 TEX37Q96LM6 180 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 MRPS26Q9BYN8 205 aaKnown RBP1.29□□□□□ -2.2
HIF1A-212ENST00000557538 NXF2Q9GZY0 626 aaKnown RBP1.29□□□□□ -2.2
HIF1A-212ENST00000557538 SMYD3Q9H7B4 428 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 WDR76Q9H967 626 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 NANOGQ9H9S0 305 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 C3orf14Q9HBI5 128 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 POLE4Q9NR33 117 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 PRR34Q9NV39 138 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 PIPOXQ9P0Z9 390 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 CD84Q9UIB8 345 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms