RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 PITX2Q99697 317 aa7.29□□□□□ -1.24
NEDD1-211ENST00000557454 SPATA5L1Q9BVQ7 753 aa7.29□□□□□ -1.24
NEDD1-211ENST00000557454 TBC1D23Q9NUY8 699 aa7.29□□□□□ -1.24
NEDD1-211ENST00000557454 NLKQ9UBE8 527 aa7.29□□□□□ -1.24
NEDD1-211ENST00000557454 MINOS1-NBL1R4GNA1 71 aa7.29□□□□□ -1.24
NEDD1-211ENST00000557454 TEX13CA0A0J9YWL9 993 aa7.28□□□□□ -1.24
NEDD1-211ENST00000557454 MEX3AA1L020 520 aaKnown RBP7.28□□□□□ -1.24
NEDD1-211ENST00000557454 A6NIZ1 184 aa7.28□□□□□ -1.24
NEDD1-211ENST00000557454 ANP32DO95626 131 aa7.28□□□□□ -1.24
NEDD1-211ENST00000557454 MT-ND1P03886 318 aa7.28□□□□□ -1.24
NEDD1-211ENST00000557454 OR8U8P0C7N1 319 aa7.28□□□□□ -1.24
NEDD1-211ENST00000557454 ZNF823P16415 610 aa7.28□□□□□ -1.24
NEDD1-211ENST00000557454 AQP1P29972 269 aa7.28□□□□□ -1.24
NEDD1-211ENST00000557454 DLX6P56179 175 aa7.28□□□□□ -1.24
NEDD1-211ENST00000557454 CTXN1P60606 82 aa7.28□□□□□ -1.24
NEDD1-211ENST00000557454 RAP1BP61224 184 aa7.28□□□□□ -1.24
NEDD1-211ENST00000557454 LSM6P62312 80 aaKnown RBP7.28□□□□□ -1.24
NEDD1-211ENST00000557454 RAP1AP62834 184 aa7.28□□□□□ -1.24
NEDD1-211ENST00000557454 RGNQ15493 299 aa7.28□□□□□ -1.24
NEDD1-211ENST00000557454 SNAI3Q3KNW1 292 aa7.28□□□□□ -1.24
NEDD1-211ENST00000557454 CXorf66Q5JRM2 361 aaPredicted RBP7.28□□□□□ -1.24
NEDD1-211ENST00000557454 LINC00336Q6ZUF6 198 aa7.28□□□□□ -1.24
NEDD1-211ENST00000557454 CPLX4Q7Z7G2 160 aa7.28□□□□□ -1.24
NEDD1-211ENST00000557454 RBM45Q8IUH3 476 aaKnown RBP7.28□□□□□ -1.24
NEDD1-211ENST00000557454 GLB1L2Q8IW92 636 aa7.28□□□□□ -1.24
NEDD1-211ENST00000557454 STPG2Q8N412 459 aa7.28□□□□□ -1.24
NEDD1-211ENST00000557454 FAM71E2Q8N5Q1 922 aa7.28□□□□□ -1.24
NEDD1-211ENST00000557454 MAPKAPK5-AS1Q8N8E1 139 aa7.28□□□□□ -1.24
NEDD1-211ENST00000557454 SMYD1Q8NB12 490 aa7.28□□□□□ -1.24
NEDD1-211ENST00000557454 STMN2Q93045 179 aa7.28□□□□□ -1.24
NEDD1-211ENST00000557454 FAM46AQ96IP4 442 aaKnown RBP7.28□□□□□ -1.24
NEDD1-211ENST00000557454 MPP4Q96JB8 637 aa7.28□□□□□ -1.24
NEDD1-211ENST00000557454 PRSS27Q9BQR3 290 aa7.28□□□□□ -1.24
NEDD1-211ENST00000557454 TLNRD1Q9H1K6 362 aa7.28□□□□□ -1.24
NEDD1-211ENST00000557454 PSMC3IPQ9P2W1 217 aaPredicted RBP7.28□□□□□ -1.24
NEDD1-211ENST00000557454 MOB4Q9Y3A3 225 aa7.28□□□□□ -1.24
NEDD1-211ENST00000557454 LHFPL6Q9Y693 200 aa7.28□□□□□ -1.24
NEDD1-211ENST00000557454 HSPE1-MOB4S4R3N1 261 aa7.28□□□□□ -1.24
NEDD1-211ENST00000557454 TRAPPC13A5PLN9 417 aa7.27□□□□□ -1.25
NEDD1-211ENST00000557454 PRORSD1PA6NEY8 169 aa7.27□□□□□ -1.25
NEDD1-211ENST00000557454 C17orf98A8MV24 154 aa7.27□□□□□ -1.25
NEDD1-211ENST00000557454 C12orf77C9JDV5 145 aa7.27□□□□□ -1.25
NEDD1-211ENST00000557454 OVOL1O14753 267 aa7.27□□□□□ -1.25
NEDD1-211ENST00000557454 PSPNO60542 156 aa7.27□□□□□ -1.25
NEDD1-211ENST00000557454 PIPP12273 146 aaPredicted RBP7.27□□□□□ -1.25
NEDD1-211ENST00000557454 ALDH3A1P30838 453 aa7.27□□□□□ -1.25
NEDD1-211ENST00000557454 MDH1P40925 334 aaKnown RBP7.27□□□□□ -1.25
NEDD1-211ENST00000557454 CCT5P48643 541 aa7.27□□□□□ -1.25
NEDD1-211ENST00000557454 HIST1H3AP68431 136 aa7.27□□□□□ -1.25
NEDD1-211ENST00000557454 TRAP1Q12931 704 aaKnown RBP7.27□□□□□ -1.25
NEDD1-211ENST00000557454 IL18R1Q13478 541 aa7.27□□□□□ -1.25
NEDD1-211ENST00000557454 MEP1BQ16820 701 aa7.27□□□□□ -1.25
NEDD1-211ENST00000557454 GLYATL3Q5SZD4 288 aa7.27□□□□□ -1.25
NEDD1-211ENST00000557454 HIST2H3PS2Q5TEC6 136 aa7.27□□□□□ -1.25
NEDD1-211ENST00000557454 TMEM65Q6PI78 240 aa7.27□□□□□ -1.25
NEDD1-211ENST00000557454 CEMP1Q6PRD7 247 aaPredicted RBP7.27□□□□□ -1.25
NEDD1-211ENST00000557454 HIST2H3AQ71DI3 136 aa7.27□□□□□ -1.25
NEDD1-211ENST00000557454 TSEN54Q7Z6J9 526 aaKnown RBP7.27□□□□□ -1.25
NEDD1-211ENST00000557454 HAPLN4Q86UW8 402 aa7.27□□□□□ -1.25
NEDD1-211ENST00000557454 ZNF575Q86XF7 245 aa7.27□□□□□ -1.25
NEDD1-211ENST00000557454 GJC3Q8NFK1 279 aa7.27□□□□□ -1.25
NEDD1-211ENST00000557454 OR4D11Q8NGI4 311 aa7.27□□□□□ -1.25
NEDD1-211ENST00000557454 DCUN1D4Q92564 292 aa7.27□□□□□ -1.25
NEDD1-211ENST00000557454 RPL3LQ92901 407 aaKnown RBP7.27□□□□□ -1.25
NEDD1-211ENST00000557454 RERGLQ9H628 205 aa7.27□□□□□ -1.25
NEDD1-211ENST00000557454 ZNF222Q9UK12 451 aa7.27□□□□□ -1.25
NEDD1-211ENST00000557454 COA3Q9Y2R0 106 aaPredicted RBP7.27□□□□□ -1.25
NEDD1-211ENST00000557454 AP4M1O00189 453 aa7.26□□□□□ -1.25
NEDD1-211ENST00000557454 COPEO14579 308 aa7.26□□□□□ -1.25
NEDD1-211ENST00000557454 TIPRLO75663 272 aa7.26□□□□□ -1.25
NEDD1-211ENST00000557454 OR5F1O95221 314 aa7.26□□□□□ -1.25
NEDD1-211ENST00000557454 ZCCHC18P0CG32 403 aa7.26□□□□□ -1.25
NEDD1-211ENST00000557454 PSG2P11465 335 aa7.26□□□□□ -1.25
NEDD1-211ENST00000557454 BRS3P32247 399 aa7.26□□□□□ -1.25
NEDD1-211ENST00000557454 GNALP38405 381 aa7.26□□□□□ -1.25
NEDD1-211ENST00000557454 CDK6Q00534 326 aa7.26□□□□□ -1.25
NEDD1-211ENST00000557454 RBMY1FQ15415 496 aaKnown RBP7.26□□□□□ -1.25
NEDD1-211ENST00000557454 GCNT6Q5T4J0 391 aa7.26□□□□□ -1.25
NEDD1-211ENST00000557454 GPR139Q6DWJ6 353 aa7.26□□□□□ -1.25
NEDD1-211ENST00000557454 REEP3Q6NUK4 255 aa7.26□□□□□ -1.25
NEDD1-211ENST00000557454 SLC35E3Q7Z769 313 aa7.26□□□□□ -1.25
NEDD1-211ENST00000557454 LRRC75AQ8NAA5 344 aa7.26□□□□□ -1.25
NEDD1-211ENST00000557454 OR10Z1Q8NGY1 313 aa7.26□□□□□ -1.25
NEDD1-211ENST00000557454 OR2T27Q8NH04 317 aa7.26□□□□□ -1.25
NEDD1-211ENST00000557454 TMEM255BQ8WV15 326 aa7.26□□□□□ -1.25
NEDD1-211ENST00000557454 ZIM3Q96PE6 472 aa7.26□□□□□ -1.25
NEDD1-211ENST00000557454 TUBA4BQ9H853 241 aa7.26□□□□□ -1.25
NEDD1-211ENST00000557454 YY1AP1Q9H869 796 aa7.26□□□□□ -1.25
NEDD1-211ENST00000557454 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.26□□□□□ -1.25
NEDD1-211ENST00000557454 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.26□□□□□ -1.25
NEDD1-211ENST00000557454 IGHV2-26A0A0B4J1V2 119 aa7.25□□□□□ -1.25
NEDD1-211ENST00000557454 ANKRD30BLA7E2S9 258 aa7.25□□□□□ -1.25
NEDD1-211ENST00000557454 FAM229AH3BQW9 127 aa7.25□□□□□ -1.25
NEDD1-211ENST00000557454 M0R135 149 aa7.25□□□□□ -1.25
NEDD1-211ENST00000557454 SLC22A2O15244 555 aa7.25□□□□□ -1.25
NEDD1-211ENST00000557454 SLC16A7O60669 478 aa7.25□□□□□ -1.25
NEDD1-211ENST00000557454 PTMSP20962 102 aa7.25□□□□□ -1.25
NEDD1-211ENST00000557454 ACTA2P62736 377 aa7.25□□□□□ -1.25
NEDD1-211ENST00000557454 ACTG2P63267 376 aa7.25□□□□□ -1.25
NEDD1-211ENST00000557454 ACTC1P68032 377 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms