RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 OR5P3Q8WZ94 311 aa10.48□□□□□ -0.73
SLIRP-209ENST00000557342 RORBQ92753 470 aa10.48□□□□□ -0.73
SLIRP-209ENST00000557342 PPP1R14AQ96A00 147 aa10.48□□□□□ -0.73
SLIRP-209ENST00000557342 LGALS12Q96DT0 336 aa10.48□□□□□ -0.73
SLIRP-209ENST00000557342 ITPKCQ96DU7 683 aa10.48□□□□□ -0.73
SLIRP-209ENST00000557342 RNF170Q96K19 258 aa10.48□□□□□ -0.73
SLIRP-209ENST00000557342 ADI1Q9BV57 179 aa10.48□□□□□ -0.73
SLIRP-209ENST00000557342 TMEM165Q9HC07 324 aa10.48□□□□□ -0.73
SLIRP-209ENST00000557342 INPP5EQ9NRR6 644 aa10.48□□□□□ -0.73
SLIRP-209ENST00000557342 MRPS18AQ9NVS2 196 aaKnown RBP10.48□□□□□ -0.73
SLIRP-209ENST00000557342 AASSQ9UDR5 926 aa10.48□□□□□ -0.73
SLIRP-209ENST00000557342 ENPP5Q9UJA9 477 aa10.48□□□□□ -0.73
SLIRP-209ENST00000557342 LRCH1Q9Y2L9 728 aa10.48□□□□□ -0.73
SLIRP-209ENST00000557342 V9GYS6 101 aa10.48□□□□□ -0.73
SLIRP-209ENST00000557342 C2CD3Q4AC94 2353 aa10.48□□□□□ -0.73
SLIRP-209ENST00000557342 MTORP42345 2549 aa10.48□□□□□ -0.73
SLIRP-209ENST00000557342 NSD1Q96L73 2696 aaPredicted RBP10.48□□□□□ -0.73
SLIRP-209ENST00000557342 TRAV38-1A0A0B4J264 116 aa10.47□□□□□ -0.73
SLIRP-209ENST00000557342 A0A1B0GVI7 797 aa10.47□□□□□ -0.73
SLIRP-209ENST00000557342 IRGMA1A4Y4 181 aa10.47□□□□□ -0.73
SLIRP-209ENST00000557342 CEACAM18A8MTB9 384 aa10.47□□□□□ -0.73
SLIRP-209ENST00000557342 F5H0A9 414 aaPredicted RBP10.47□□□□□ -0.73
SLIRP-209ENST00000557342 ZNF205O95201 554 aa10.47□□□□□ -0.73
SLIRP-209ENST00000557342 IFNA2P01563 188 aa10.47□□□□□ -0.73
SLIRP-209ENST00000557342 FAM157CP0CG43 387 aa10.47□□□□□ -0.73
SLIRP-209ENST00000557342 RPS2P15880 293 aaKnown RBP10.47□□□□□ -0.73
SLIRP-209ENST00000557342 ZNF12P17014 697 aa10.47□□□□□ -0.73
SLIRP-209ENST00000557342 GATA3P23771 443 aa10.47□□□□□ -0.73
SLIRP-209ENST00000557342 RBMXP38159 391 aaKnown RBP10.47□□□□□ -0.73
SLIRP-209ENST00000557342 ISL1P61371 349 aa10.47□□□□□ -0.73
SLIRP-209ENST00000557342 ZNF154Q13106 437 aa10.47□□□□□ -0.73
SLIRP-209ENST00000557342 CEACAM21Q3KPI0 293 aa10.47□□□□□ -0.73
SLIRP-209ENST00000557342 KRTAP21-3Q3LHN1 58 aa10.47□□□□□ -0.73
SLIRP-209ENST00000557342 ESCO2Q56NI9 601 aa10.47□□□□□ -0.73
SLIRP-209ENST00000557342 DCDC5Q6ZRR9 648 aa10.47□□□□□ -0.73
SLIRP-209ENST00000557342 Q6ZSR3 168 aa10.47□□□□□ -0.73
SLIRP-209ENST00000557342 KCTD8Q6ZWB6 473 aa10.47□□□□□ -0.73
SLIRP-209ENST00000557342 NLRC3Q7RTR2 1065 aa10.47□□□□□ -0.73
SLIRP-209ENST00000557342 TEX29Q8N6K0 151 aa10.47□□□□□ -0.73
SLIRP-209ENST00000557342 APH1BQ8WW43 257 aa10.47□□□□□ -0.73
SLIRP-209ENST00000557342 TMEM246Q9BRR3 403 aa10.47□□□□□ -0.73
SLIRP-209ENST00000557342 TLNRD1Q9H1K6 362 aa10.47□□□□□ -0.73
SLIRP-209ENST00000557342 SLC22A13Q9Y226 551 aa10.47□□□□□ -0.73
SLIRP-209ENST00000557342 PIGLQ9Y2B2 252 aa10.47□□□□□ -0.73
SLIRP-209ENST00000557342 HSPE1-MOB4S4R3N1 261 aa10.47□□□□□ -0.73
SLIRP-209ENST00000557342 PPIAL4CA0A0B4J2A2 164 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 A0A0G2JMP0 313 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 A0A0X1KG70 313 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 OOEPA6NGQ2 149 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 OR5B21A6NL26 309 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 A8MXK9 166 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 H0YAE9 185 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 J3QLI3 93 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 LGALS8O00214 317 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 P2RY10O00398 339 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 SYT7O43581 403 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 NDUFA2O43678 99 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 NRASP01111 189 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 LHBP01229 141 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 IGHA1P01876 353 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 WNT2P09544 360 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 UBCP0CG48 685 aaKnown RBP10.46□□□□□ -0.73
SLIRP-209ENST00000557342 FAHP16930 419 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 SRD5A1P18405 259 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 CCL1P22362 96 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 CFHR2P36980 270 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 CAPGP40121 348 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 GNG3P63215 75 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 ADARB1P78563 741 aaKnown RBP10.46□□□□□ -0.73
SLIRP-209ENST00000557342 MRPL28Q13084 256 aaKnown RBP10.46□□□□□ -0.73
SLIRP-209ENST00000557342 GALEQ14376 348 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 FAM76BQ5HYJ3 339 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 FAM201AQ5SY85 155 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 CLVS2Q5SYC1 327 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 DCAF12L2Q5VW00 463 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 FDX2Q6P4F2 183 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 ZNF826PQ6ZT77 177 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 MOB3CQ70IA8 216 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 WDR86Q86TI4 376 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 C11orf53Q8IXP5 236 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 SYS1Q8N2H4 156 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 BOLLQ8N9W6 283 aaKnown RBP10.46□□□□□ -0.73
SLIRP-209ENST00000557342 OR4M2Q8NGB6 313 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 OR8B3Q8NGG8 313 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 OR5A2Q8NGI9 324 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 OR10Z1Q8NGY1 313 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 OR14K1Q8NGZ2 314 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 HAVCR2Q8TDQ0 301 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 LRRC29Q8WV35 223 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 NEIL1Q96FI4 390 aaPredicted RBP10.46□□□□□ -0.73
SLIRP-209ENST00000557342 OR8B2Q96RD0 313 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 ALG8Q9BVK2 526 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 VCX3BQ9H321 246 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 PPP1R3EQ9H7J1 279 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 AMBNQ9NP70 447 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 ACOXLQ9NUZ1 547 aa10.46□□□□□ -0.73
SLIRP-209ENST00000557342 POLR3KQ9Y2Y1 108 aaPredicted RBP10.46□□□□□ -0.73
SLIRP-209ENST00000557342 ARHGAP32A7KAX9 2087 aa10.45□□□□□ -0.74
SLIRP-209ENST00000557342 A0A1B0GTI1 187 aa10.45□□□□□ -0.74
SLIRP-209ENST00000557342 J3QLW9 94 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms