RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 RPL18Q07020 188 aaKnown RBP3.72□□□□□ -1.81
SCFD1-223ENST00000557076 LRRC10Q5BKY1 277 aa3.72□□□□□ -1.81
SCFD1-223ENST00000557076 BEND6Q5SZJ8 279 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-223ENST00000557076 C1orf94Q6P1W5 598 aa3.72□□□□□ -1.81
SCFD1-223ENST00000557076 ZNF613Q6PF04 617 aa3.72□□□□□ -1.81
SCFD1-223ENST00000557076 TTC33Q6PID6 262 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-223ENST00000557076 SATL1Q86VE3 508 aa3.72□□□□□ -1.81
SCFD1-223ENST00000557076 RANBP3LQ86VV4 465 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-223ENST00000557076 FGFRL1Q8N441 504 aa3.72□□□□□ -1.81
SCFD1-223ENST00000557076 NRACQ8N912 160 aa3.72□□□□□ -1.81
SCFD1-223ENST00000557076 SLC26A10Q8NG04 563 aa3.72□□□□□ -1.81
SCFD1-223ENST00000557076 OR9Q1Q8NGQ5 310 aa3.72□□□□□ -1.81
SCFD1-223ENST00000557076 OR1F12Q8NHA8 337 aa3.72□□□□□ -1.81
SCFD1-223ENST00000557076 RPS4Y2Q8TD47 263 aa3.72□□□□□ -1.81
SCFD1-223ENST00000557076 LRRC8CQ8TDW0 803 aa3.72□□□□□ -1.81
SCFD1-223ENST00000557076 ADAMTS16Q8TE57 1224 aa3.72□□□□□ -1.81
SCFD1-223ENST00000557076 LIPHQ8WWY8 451 aa3.72□□□□□ -1.81
SCFD1-223ENST00000557076 ACOT11Q8WXI4 607 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-223ENST00000557076 SLC7A6Q92536 515 aa3.72□□□□□ -1.81
SCFD1-223ENST00000557076 C12orf43Q96C57 262 aaKnown RBP3.72□□□□□ -1.81
SCFD1-223ENST00000557076 MALSU1Q96EH3 234 aa3.72□□□□□ -1.81
SCFD1-223ENST00000557076 DUS3LQ96G46 650 aaKnown RBP3.72□□□□□ -1.81
SCFD1-223ENST00000557076 OR52E6Q96RD3 313 aa3.72□□□□□ -1.81
SCFD1-223ENST00000557076 P2RX4Q99571 388 aa3.72□□□□□ -1.81
SCFD1-223ENST00000557076 CCL13Q99616 98 aa3.72□□□□□ -1.81
SCFD1-223ENST00000557076 TM2D3Q9BRN9 247 aa3.72□□□□□ -1.81
SCFD1-223ENST00000557076 THAP7Q9BT49 309 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-223ENST00000557076 HCAR1Q9BXC0 346 aa3.72□□□□□ -1.81
SCFD1-223ENST00000557076 DNTTIP1Q9H147 329 aa3.72□□□□□ -1.81
SCFD1-223ENST00000557076 TXNIPQ9H3M7 391 aa3.72□□□□□ -1.81
SCFD1-223ENST00000557076 TPT1P8Q9HAU6 139 aa3.72□□□□□ -1.81
SCFD1-223ENST00000557076 RNPEPL1Q9HAU8 725 aa3.72□□□□□ -1.81
SCFD1-223ENST00000557076 POLE4Q9NR33 117 aa3.72□□□□□ -1.81
SCFD1-223ENST00000557076 INIPQ9NRY2 104 aa3.72□□□□□ -1.81
SCFD1-223ENST00000557076 ZFP57Q9NU63 452 aa3.72□□□□□ -1.81
SCFD1-223ENST00000557076 VNN3Q9NY84 501 aa3.72□□□□□ -1.81
SCFD1-223ENST00000557076 PTTG3PQ9NZH4 202 aa3.72□□□□□ -1.81
SCFD1-223ENST00000557076 ATPIF1Q9UII2 106 aa3.72□□□□□ -1.81
SCFD1-223ENST00000557076 AURKCQ9UQB9 309 aa3.72□□□□□ -1.81
SCFD1-223ENST00000557076 ZNF256Q9Y2P7 627 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-223ENST00000557076 CAPN7Q9Y6W3 813 aa3.72□□□□□ -1.81
SCFD1-223ENST00000557076 MUC4Q99102 2169 aa3.72□□□□□ -1.81
SCFD1-223ENST00000557076 A0A087WWL8 130 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 A0A1B0GW55 424 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 PRORSD1PA6NEY8 169 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 FAM90A22PA8MWA6 464 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 E9PBE3 544 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 H0YAE9 185 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 RAB27BO00194 218 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 RFXANKO14593 260 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 CHP2O43745 196 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 DOK2O60496 412 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 ANXA2P07355 339 aaKnown RBP3.71□□□□□ -1.82
SCFD1-223ENST00000557076 ABHD2P08910 425 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 ALDOCP09972 364 aaKnown RBP3.71□□□□□ -1.82
SCFD1-223ENST00000557076 DUX4L2P0CJ85 424 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 DUX4L3P0CJ86 424 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 DUX4L5P0CJ88 424 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 DUX4L6P0CJ89 424 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 DUX4L7P0CJ90 424 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 FUT1P19526 365 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 AZGP1P25311 298 aaKnown RBP3.71□□□□□ -1.82
SCFD1-223ENST00000557076 PAX6P26367 422 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 AQP2P41181 271 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 CAV3P56539 151 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 NCALDP61601 193 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 GNG11P61952 73 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 FMODQ06828 376 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 CD47Q08722 323 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 MZT1Q08AG7 82 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 RAB32Q13637 225 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 GK2Q14410 553 aaPredicted RBP3.71□□□□□ -1.82
SCFD1-223ENST00000557076 RBMS2Q15434 407 aaKnown RBP3.71□□□□□ -1.82
SCFD1-223ENST00000557076 RGNQ15493 299 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 OR8G1Q15617 311 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 NPTX1Q15818 432 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 RSPO1Q2MKA7 263 aaPredicted RBP3.71□□□□□ -1.82
SCFD1-223ENST00000557076 TMEM95Q3KNT9 176 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 C4orf46Q504U0 113 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 WDR38Q5JTN6 314 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 C9orf66Q5T8R8 295 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 PRAMEF6Q5VXH4 476 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 DUX4L9Q6RFH8 374 aaPredicted RBP3.71□□□□□ -1.82
SCFD1-223ENST00000557076 TMEM219Q86XT9 240 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 ARMC8Q8IUR7 673 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 C11orf53Q8IXP5 236 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 OSR2Q8N2R0 312 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 GCSAMQ8N6F7 178 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 CCDC63Q8NA47 563 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 BHLHE23Q8NDY6 225 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 BBS10Q8TAM1 723 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 TCP10LQ8TDR4 215 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 MUL1Q969V5 352 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 MED30Q96HR3 178 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 MPP4Q96JB8 637 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 PKNOX2Q96KN3 472 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 WFDC6Q9BQY6 131 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 ZNF426Q9BUY5 554 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 RMND5AQ9H871 391 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 ABCB10Q9NRK6 738 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms