RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 C4orf45Q96LM5 186 aa4.46□□□□□ -1.7
SYNE2-223ENST00000557005 PLEKHF2Q9H8W4 249 aa4.46□□□□□ -1.7
SYNE2-223ENST00000557005 ANKRD10Q9NXR5 420 aa4.46□□□□□ -1.7
SYNE2-223ENST00000557005 CES1P1Q9UKY3 287 aa4.46□□□□□ -1.7
SYNE2-223ENST00000557005 AQP7O14520 342 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 GEMIN2O14893 280 aaKnown RBP4.45□□□□□ -1.7
SYNE2-223ENST00000557005 SOCS1O15524 211 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 P04436 131 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 FGF2P09038 288 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 OR5AC1P0C628 307 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 TLE1Q04724 770 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 PNLIPRP3Q17RR3 467 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 SLC16A14Q7RTX9 510 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 PSMF1Q92530 271 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 SEH1LQ96EE3 360 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 ZNF845Q96IR2 970 aaPredicted RBP4.45□□□□□ -1.7
SYNE2-223ENST00000557005 RARRES2Q99969 163 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 HAO2Q9NYQ3 351 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 PSENENQ9NZ42 101 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 LPAR3Q9UBY5 353 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 ZMIZ1Q9ULJ6 1067 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 A0A087WV48 116 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 LOC102725191A0A1B0GVB3 256 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 IGHV3-9P01782 118 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 OR8U8P0C7N1 319 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 APOBEC1P41238 236 aaKnown RBP4.45□□□□□ -1.7
SYNE2-223ENST00000557005 SULT1A1P50225 295 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 NOVA1P51513 510 aaKnown RBP4.45□□□□□ -1.7
SYNE2-223ENST00000557005 RRADP55042 308 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 UBE2G2P60604 165 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 ZNF345Q14585 488 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 ARL6IP1Q15041 203 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 THEM4Q5T1C6 240 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 DRAM2Q6UX65 266 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 OR5M9Q8NGP3 310 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 EMG1Q92979 244 aaKnown RBP4.45□□□□□ -1.7
SYNE2-223ENST00000557005 PRRX2Q99811 253 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 FAAP24Q9BTP7 215 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 HINT2Q9BX68 163 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 RARRES3Q9UL19 164 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 TRAPPC2LQ9UL33 140 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 PLPP3O14495 311 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 NRG2O14511 850 aaPredicted RBP4.45□□□□□ -1.7
SYNE2-223ENST00000557005 EIF4E2O60573 245 aaKnown RBP4.45□□□□□ -1.7
SYNE2-223ENST00000557005 DUS4LO95620 317 aaKnown RBP4.45□□□□□ -1.7
SYNE2-223ENST00000557005 EML2O95834 649 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 EPPINO95925 133 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 HLA-DOBP13765 273 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 FAHP16930 419 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 CD200P41217 278 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 TMEM33P57088 247 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 PLP2Q04941 152 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 MICBQ29980 383 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 SPINK9Q5DT21 86 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 OR56B2PQ8NGI1 322 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 LILRB1Q8NHL6 650 aaPredicted RBP4.45□□□□□ -1.7
SYNE2-223ENST00000557005 SLC37A2Q8TED4 501 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 COX14Q96I36 57 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 PLEKHA2Q9HB19 425 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 LIPGQ9Y5X9 500 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 A0A1B0GV90 55 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 A0A1W2PPV4 95 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 LINC01565O15544 149 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 DDAH2O95865 285 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 KLK3P07288 261 aaPredicted RBP4.45□□□□□ -1.7
SYNE2-223ENST00000557005 MPGP29372 298 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 PRSS12P56730 875 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 RNF4P78317 190 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 CLN3Q13286 438 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 MFAP5Q13361 173 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 TFAP2EQ6VUC0 442 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 VN1R4Q7Z5H5 301 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 OR5AS1Q8N127 324 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 OR51F2Q8NH61 342 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 NPDC1Q9NQX5 325 aaPredicted RBP4.45□□□□□ -1.7
SYNE2-223ENST00000557005 HSF4Q9ULV5 492 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 SIRPB1O00241 398 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 ST8SIA3O43173 380 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 SOX15O60248 233 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 HLA-HP01893 362 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 CHRM2P08172 466 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 ADRA2CP18825 462 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 SPINK2P20155 84 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 FGF7P21781 194 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 HOXC8P31273 242 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 IL10RAQ13651 578 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 CD226Q15762 336 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 ETFRF1Q6IPR1 90 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 DMBX1Q8NFW5 382 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 PACRGQ96M98 296 aaPredicted RBP4.45□□□□□ -1.7
SYNE2-223ENST00000557005 RAB33BQ9H082 229 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 SLC35B3Q9H1N7 401 aa4.45□□□□□ -1.7
SYNE2-223ENST00000557005 PTRH2Q9Y3E5 179 aaKnown RBP4.45□□□□□ -1.7
SYNE2-223ENST00000557005 A0A0G2JK05 382 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 IGHV3-64DA0A0J9YX35 117 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 OTOL1A6NHN0 477 aaPredicted RBP4.44□□□□□ -1.7
SYNE2-223ENST00000557005 CST7O76096 145 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 NKX2-2O95096 273 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 MBP02144 154 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 CRHP06850 196 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms