RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 FBXO46Q6PJ61 603 aaPredicted RBP10.04□□□□□ -0.8
SRP54-213ENST00000556994 C5orf46Q6UWT4 87 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 Q7L0L9 218 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 TMPRSS9Q7Z410 1059 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 LHFPL1Q86WI0 220 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 GKN2Q86XP6 184 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 DMBX1Q8NFW5 382 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 OR56B1Q8NGI3 324 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 NANPQ8TBE9 248 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 SECTM1Q8WVN6 248 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 SAT2Q96F10 170 aaPredicted RBP10.04□□□□□ -0.8
SRP54-213ENST00000556994 C14orf79Q96F83 325 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 MRPL13Q9BYD1 178 aaKnown RBP10.04□□□□□ -0.8
SRP54-213ENST00000556994 OR10A2Q9H208 303 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 SLC2A4RGQ9NR83 387 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 ANAPC10Q9UM13 185 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 OSGIN2Q9Y236 505 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 VSTM2BA6NLU5 285 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 CEACAM18A8MTB9 384 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 ZNF814B7Z6K7 855 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 HEXAP06865 529 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 FCGR3AP08637 254 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 ACAA1P09110 424 aaPredicted RBP10.04□□□□□ -0.8
SRP54-213ENST00000556994 ZNF708P17019 499 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 SERPINA2P20848 420 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 PTGER4P35408 488 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 GABREP78334 506 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 HSD11B2P80365 405 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 ACY1Q03154 408 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 CFHR1Q03591 330 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 C17orf67Q0P5P2 114 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 MYBPHQ13203 477 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 IL15RAQ13261 267 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 HABP2Q14520 560 aaPredicted RBP10.04□□□□□ -0.8
SRP54-213ENST00000556994 IAH1Q2TAA2 248 aaPredicted RBP10.04□□□□□ -0.8
SRP54-213ENST00000556994 ACTBL2Q562R1 376 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 BTNL8Q6UX41 500 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 RBMS3Q6XE24 437 aaKnown RBP10.04□□□□□ -0.8
SRP54-213ENST00000556994 Q6ZRG5 221 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 ZNF283Q8N7M2 679 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 ST8SIA1Q92185 356 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 NECAB3Q96P71 396 aaPredicted RBP10.04□□□□□ -0.8
SRP54-213ENST00000556994 NUDT16L1Q9BRJ7 211 aaKnown RBP10.04□□□□□ -0.8
SRP54-213ENST00000556994 ELL3Q9HB65 397 aaPredicted RBP10.04□□□□□ -0.8
SRP54-213ENST00000556994 ZNF701Q9NV72 531 aaPredicted RBP10.04□□□□□ -0.8
SRP54-213ENST00000556994 EDARQ9UNE0 448 aa10.04□□□□□ -0.8
SRP54-213ENST00000556994 RPH3AQ9Y2J0 694 aaPredicted RBP10.04□□□□□ -0.8
SRP54-213ENST00000556994 PRSS44E7EML9 344 aa10.03□□□□□ -0.8
SRP54-213ENST00000556994 RAMP1O60894 148 aa10.03□□□□□ -0.8
SRP54-213ENST00000556994 ZNF205O95201 554 aa10.03□□□□□ -0.8
SRP54-213ENST00000556994 SCGB1D2O95969 90 aa10.03□□□□□ -0.8
SRP54-213ENST00000556994 APOC1P02654 83 aa10.03□□□□□ -0.8
SRP54-213ENST00000556994 CD5P06127 495 aa10.03□□□□□ -0.8
SRP54-213ENST00000556994 RPL12P30050 165 aaKnown RBP10.03□□□□□ -0.8
SRP54-213ENST00000556994 PPT1P50897 306 aa10.03□□□□□ -0.8
SRP54-213ENST00000556994 GPR85P60893 370 aa10.03□□□□□ -0.8
SRP54-213ENST00000556994 SLC16A13Q7RTY0 426 aa10.03□□□□□ -0.8
SRP54-213ENST00000556994 MISPQ8IVT2 679 aa10.03□□□□□ -0.8
SRP54-213ENST00000556994 KIRREL1Q96J84 757 aa10.03□□□□□ -0.8
SRP54-213ENST00000556994 URM1Q9BTM9 101 aaKnown RBP10.03□□□□□ -0.8
SRP54-213ENST00000556994 RPS10P5Q9NQ39 176 aa10.03□□□□□ -0.8
SRP54-213ENST00000556994 FBXL17Q9UF56 701 aa10.03□□□□□ -0.8
SRP54-213ENST00000556994 LSM5Q9Y4Y9 91 aaKnown RBP10.03□□□□□ -0.8
SRP54-213ENST00000556994 NCOA6Q14686 2063 aaPredicted RBP10.02□□□□□ -0.8
SRP54-213ENST00000556994 SHISA7A6NL88 538 aa10.02□□□□□ -0.8
SRP54-213ENST00000556994 STMND1H3BQB6 276 aa10.02□□□□□ -0.8
SRP54-213ENST00000556994 HPNP05981 417 aa10.02□□□□□ -0.8
SRP54-213ENST00000556994 DAOP14920 347 aa10.02□□□□□ -0.8
SRP54-213ENST00000556994 FOSL2P15408 326 aa10.02□□□□□ -0.8
SRP54-213ENST00000556994 NME1P15531 152 aaKnown RBP10.02□□□□□ -0.8
SRP54-213ENST00000556994 CPT2P23786 658 aa10.02□□□□□ -0.8
SRP54-213ENST00000556994 FCGR2CP31995 323 aa10.02□□□□□ -0.8
SRP54-213ENST00000556994 SULT1A2P50226 295 aa10.02□□□□□ -0.8
SRP54-213ENST00000556994 CHRFAM7AQ494W8 412 aa10.02□□□□□ -0.8
SRP54-213ENST00000556994 THEM4Q5T1C6 240 aa10.02□□□□□ -0.8
SRP54-213ENST00000556994 DTX1Q86Y01 620 aa10.02□□□□□ -0.8
SRP54-213ENST00000556994 UEVLDQ8IX04 471 aa10.02□□□□□ -0.8
SRP54-213ENST00000556994 ISOC2Q96AB3 205 aa10.02□□□□□ -0.8
SRP54-213ENST00000556994 MVB12AQ96EY5 273 aa10.02□□□□□ -0.8
SRP54-213ENST00000556994 SCGB3A2Q96PL1 93 aa10.02□□□□□ -0.8
SRP54-213ENST00000556994 HDHD3Q9BSH5 251 aaPredicted RBP10.02□□□□□ -0.8
SRP54-213ENST00000556994 NAA11Q9BSU3 229 aaPredicted RBP10.02□□□□□ -0.8
SRP54-213ENST00000556994 C20orf24Q9BUV8 137 aa10.02□□□□□ -0.8
SRP54-213ENST00000556994 CNTNAP3Q9BZ76 1288 aa10.02□□□□□ -0.8
SRP54-213ENST00000556994 FANCFQ9NPI8 374 aa10.02□□□□□ -0.8
SRP54-213ENST00000556994 KLRF1Q9NZS2 232 aa10.02□□□□□ -0.8
SRP54-213ENST00000556994 DNAJB11Q9UBS4 358 aa10.02□□□□□ -0.8
SRP54-213ENST00000556994 B3GALT5Q9Y2C3 310 aa10.02□□□□□ -0.8
SRP54-213ENST00000556994 K7EPK0 472 aa10.02□□□□□ -0.81
SRP54-213ENST00000556994 SNRNP70P08621 437 aaKnown RBP10.02□□□□□ -0.81
SRP54-213ENST00000556994 PET100P0DJ07 73 aa10.02□□□□□ -0.81
SRP54-213ENST00000556994 PGA4P0DJD7 388 aa10.02□□□□□ -0.81
SRP54-213ENST00000556994 PGA3P0DJD8 388 aa10.02□□□□□ -0.81
SRP54-213ENST00000556994 ADH6P28332 368 aa10.02□□□□□ -0.81
SRP54-213ENST00000556994 TMEM33P57088 247 aa10.02□□□□□ -0.81
SRP54-213ENST00000556994 KISS1Q15726 138 aa10.02□□□□□ -0.81
SRP54-213ENST00000556994 FAM71E2Q8N5Q1 922 aa10.02□□□□□ -0.81
SRP54-213ENST00000556994 APCDD1LQ8NCL9 501 aa10.02□□□□□ -0.81
SRP54-213ENST00000556994 MRPL38Q96DV4 380 aaKnown RBP10.02□□□□□ -0.81
SRP54-213ENST00000556994 BSCL2Q96G97 398 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms