RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 TTC33Q6PID6 262 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-245ENST00000556958 ZYG11AQ6WRX3 759 aa4.47□□□□□ -1.69
ATXN3-245ENST00000556958 ZNF788Q6ZQV5 615 aa4.47□□□□□ -1.69
ATXN3-245ENST00000556958 MRPL21Q7Z2W9 205 aaKnown RBP4.47□□□□□ -1.69
ATXN3-245ENST00000556958 DPY19L4Q7Z388 723 aa4.47□□□□□ -1.69
ATXN3-245ENST00000556958 CALHM1Q8IU99 346 aa4.47□□□□□ -1.69
ATXN3-245ENST00000556958 IFT20Q8IY31 132 aa4.47□□□□□ -1.69
ATXN3-245ENST00000556958 MAPKAPK5-AS1Q8N8E1 139 aa4.47□□□□□ -1.69
ATXN3-245ENST00000556958 NDNFQ8TB73 568 aa4.47□□□□□ -1.69
ATXN3-245ENST00000556958 BCAS4Q8TDM0 211 aa4.47□□□□□ -1.69
ATXN3-245ENST00000556958 HDAC2Q92769 488 aaKnown RBP4.47□□□□□ -1.69
ATXN3-245ENST00000556958 SLCO4A1Q96BD0 722 aa4.47□□□□□ -1.69
ATXN3-245ENST00000556958 PANX1Q96RD7 426 aa4.47□□□□□ -1.69
ATXN3-245ENST00000556958 PAFAH2Q99487 392 aa4.47□□□□□ -1.69
ATXN3-245ENST00000556958 SPATA5L1Q9BVQ7 753 aa4.47□□□□□ -1.69
ATXN3-245ENST00000556958 DCDC2Q9UHG0 476 aa4.47□□□□□ -1.69
ATXN3-245ENST00000556958 BTNL2Q9UIR0 455 aa4.47□□□□□ -1.69
ATXN3-245ENST00000556958 TANC2Q9HCD6 1990 aa4.47□□□□□ -1.69
ATXN3-245ENST00000556958 MUC4Q99102 2169 aa4.47□□□□□ -1.69
ATXN3-245ENST00000556958 GGT3PA6NGU5 568 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 NPIPB13A6NJU9 1138 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 CD300LBA8K4G0 201 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 ODF3BA8MYP8 253 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 C12orf77C9JDV5 145 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 NPIPB4C9JG80 1138 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 G3V2L1 256 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 BHLHE40O14503 412 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 OVOL1O14753 267 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 SELLP14151 372 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 FASP25445 335 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 S100A3P33764 101 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 KIR3DL2P43630 455 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 CAPZA1P52907 286 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 DSTNP60981 165 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 RPL31P62899 125 aaKnown RBP4.46□□□□□ -1.7
ATXN3-245ENST00000556958 EMX2Q04743 252 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 GABPB1Q06547 395 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-245ENST00000556958 RPL18Q07020 188 aaKnown RBP4.46□□□□□ -1.7
ATXN3-245ENST00000556958 PMS2P11Q13670 270 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 MAPK11Q15759 364 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 SNAPC1Q16533 368 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 ZNF626Q68DY1 528 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 ZNF613Q6PF04 617 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 GLB1L2Q8IW92 636 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 FOXRED2Q8IWF2 684 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 STPG3Q8N7X2 389 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 CLRN3Q8NCR9 226 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 OR11H1Q8NG94 326 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 OR11H6Q8NGC7 330 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 OR8S1Q8NH09 359 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 LRRC8CQ8TDW0 803 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 ACMSDQ8TDX5 336 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 C4orf3Q8WVX3 66 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 TESCQ96BS2 214 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 TMEM19Q96HH6 336 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 C16orf92Q96LL3 132 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 GAFA1Q96PS6 74 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 RAB3IPQ96QF0 476 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-245ENST00000556958 HIPK2Q9H2X6 1198 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 BCL2L10Q9HD36 194 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 PAPOLBQ9NRJ5 636 aaKnown RBP4.46□□□□□ -1.7
ATXN3-245ENST00000556958 DNAJB9Q9UBS3 223 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 GIMAP2Q9UG22 337 aa4.46□□□□□ -1.7
ATXN3-245ENST00000556958 PRORSD1PA6NEY8 169 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 A6NIZ1 184 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 SH2D7A6NKC9 451 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-245ENST00000556958 C5orf58C9J3I9 102 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 HSPA12AO43301 675 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 CHP2O43745 196 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 TRIM13O60858 407 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 CNIH1O95406 144 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 PLA2G1BP04054 148 aaKnown RBP4.45□□□□□ -1.7
ATXN3-245ENST00000556958 LCATP04180 440 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 AMY1AP04745 511 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 ELANEP08246 267 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 IGHV1-8P0DP01 117 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 CPA3P15088 417 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 FUT1P19526 365 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 AQP2P41181 271 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 GABRA2P47869 451 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 CCT5P48643 541 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 MVDP53602 400 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 CLNS1AP54105 237 aaKnown RBP4.45□□□□□ -1.7
ATXN3-245ENST00000556958 SCAND1P57086 179 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 RGS8P57771 180 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-245ENST00000556958 RAP1BP61224 184 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 RPL27P61353 136 aaKnown RBP4.45□□□□□ -1.7
ATXN3-245ENST00000556958 LSM6P62312 80 aaKnown RBP4.45□□□□□ -1.7
ATXN3-245ENST00000556958 RAP1AP62834 184 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 ROM1Q03395 351 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.45□□□□□ -1.7
ATXN3-245ENST00000556958 FOXE3Q13461 319 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 TMEM200BQ69YZ2 307 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 LCN8Q6JVE9 175 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 NANOGP8Q6NSW7 305 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 DHRS4L2Q6PKH6 230 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 ZDHHC24Q6UX98 284 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 WDR82Q6UXN9 313 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 ZNF782Q6ZMW2 699 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-245ENST00000556958 ACP7Q6ZNF0 438 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms