RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 SPTSSAQ969W0 71 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 MBD6Q96DN6 1003 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 SMIM19Q96E16 107 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 FAM71F1Q96KD3 344 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-244ENST00000556898 NKX3-1Q99801 234 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-244ENST00000556898 SYT3Q9BQG1 590 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 CHCHD6Q9BRQ6 235 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 CENPOQ9BU64 300 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 HDHD5Q9BXW7 423 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 RBM38Q9H0Z9 239 aaKnown RBP4.55□□□□□ -1.68
ATXN3-244ENST00000556898 NIPAL2Q9H841 368 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 CDH20Q9HBT6 801 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 VCX3AQ9NNX9 186 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 EXOSC4Q9NPD3 245 aaKnown RBP4.55□□□□□ -1.68
ATXN3-244ENST00000556898 ISYNA1Q9NPH2 558 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 GPR84Q9NQS5 396 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 NDUFB11Q9NX14 153 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 CRNNQ9UBG3 495 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-244ENST00000556898 NUFIP1Q9UHK0 495 aaKnown RBP4.55□□□□□ -1.68
ATXN3-244ENST00000556898 ZGRF1Q86YA3 2104 aa4.55□□□□□ -1.68
ATXN3-244ENST00000556898 NIPBLQ6KC79 2804 aaeCLIP4.54□□□□□ -1.68
ATXN3-244ENST00000556898 IGHV2OR16-5A0A0B4J2B6 119 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 LOC107986453A0A1B0GWG9 222 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 CCDC160A6NGH7 325 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 GABRPO00591 440 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 SMPD2O60906 423 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 NCR1O76036 304 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 IGLV3-1P01715 115 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 HEXAP06865 529 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 COX5BP10606 129 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 ACHEP22303 614 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 ACKR3P25106 362 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 CD40P25942 277 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 LOXP28300 417 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-244ENST00000556898 DCTDP32321 178 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 MPV17P39210 176 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 CCR9P51686 369 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 CAV3P56539 151 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 VBP1P61758 197 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 NAAAQ02083 359 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 BDH1Q02338 343 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 BSPH1Q075Z2 132 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 ECH1Q13011 328 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 SPCS2Q15005 226 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 TBC1D28Q2M2D7 210 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 ACSM3Q53FZ2 586 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 C22orf42Q6IC83 251 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 DRAM2Q6UX65 266 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 CEACAM19Q7Z692 300 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 LRP11Q86VZ4 500 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 COMMD2Q86X83 199 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 KBTBD8Q8NFY9 601 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 OR1J2Q8NGS2 313 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 OR1J1Q8NGS3 322 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 OR14K1Q8NGZ2 314 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 OR5AK2Q8NH90 309 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 NDNFQ8TB73 568 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 SLC25A40Q8TBP6 338 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 GTF3AQ92664 365 aaKnown RBP4.54□□□□□ -1.68
ATXN3-244ENST00000556898 MUCL1Q96DR8 90 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 MRPL48Q96GC5 212 aaKnown RBP4.54□□□□□ -1.68
ATXN3-244ENST00000556898 REEP6Q96HR9 211 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 RADILQ96JH8 1075 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 OR14A2Q96R54 314 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 SMR3AQ99954 134 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 KCNS3Q9BQ31 491 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 WACQ9BTA9 647 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 MED18Q9BUE0 208 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 C1QTNF5Q9BXJ0 243 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 OR2J1Q9GZK6 312 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 LIME1Q9H400 295 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 NOX4Q9NPH5 578 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 TXNL4BQ9NX01 149 aaKnown RBP4.54□□□□□ -1.68
ATXN3-244ENST00000556898 TAS2R4Q9NYW5 299 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 ENPP5Q9UJA9 477 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 STUB1Q9UNE7 303 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 PLEKHA6Q9Y2H5 1048 aa4.54□□□□□ -1.68
ATXN3-244ENST00000556898 NCOA6Q14686 2063 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-244ENST00000556898 TRAV8-7A0A075B6U6 113 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 TRBV5-5A0A0J9YX44 114 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 hCG_38984A0A1B0GV85 526 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 A0A1B0GVI7 797 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-244ENST00000556898 TRDV1A0A1B0GX56 115 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 A0A1W2PPR1 153 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 TUBAL3A6NHL2 446 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 DEFB108AA8MXU0 73 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 ZNF879B4DU55 563 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 ABCD4O14678 606 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 SYT7O43581 403 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 AIREO43918 545 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 SC5DO75845 299 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 CCL1P22362 96 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 GABRA5P31644 462 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 THBS4P35443 961 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 PEX19P40855 299 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 SERPINB10P48595 397 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 FABP6P51161 128 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 UCP2P55851 309 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 TAS2R43P59537 309 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms