RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 R4GMQ9 66 aa18.86■□□□□ 0.61
PABPN1-207ENST00000556821 OOEPA6NGQ2 149 aa18.85■□□□□ 0.61
PABPN1-207ENST00000556821 LOC110117498-PIK3R3F6TDL0 507 aa18.85■□□□□ 0.61
PABPN1-207ENST00000556821 TCF21O43680 179 aa18.85■□□□□ 0.61
PABPN1-207ENST00000556821 CFPP27918 469 aa18.85■□□□□ 0.61
PABPN1-207ENST00000556821 MAP2K3P46734 347 aa18.85■□□□□ 0.61
PABPN1-207ENST00000556821 IL5RAQ01344 420 aa18.85■□□□□ 0.61
PABPN1-207ENST00000556821 POU4F2Q12837 409 aa18.85■□□□□ 0.61
PABPN1-207ENST00000556821 ZNF684Q5T5D7 378 aa18.85■□□□□ 0.61
PABPN1-207ENST00000556821 WDR25Q64LD2 544 aaPredicted RBP18.85■□□□□ 0.61
PABPN1-207ENST00000556821 FAM90A1Q86YD7 464 aa18.85■□□□□ 0.61
PABPN1-207ENST00000556821 FAM71F1Q96KD3 344 aaPredicted RBP18.85■□□□□ 0.61
PABPN1-207ENST00000556821 SLC29A1Q99808 456 aa18.85■□□□□ 0.61
PABPN1-207ENST00000556821 MICU1Q9BPX6 476 aa18.85■□□□□ 0.61
PABPN1-207ENST00000556821 RTL8AQ9BWD3 113 aa18.85■□□□□ 0.61
PABPN1-207ENST00000556821 MEGF8Q7Z7M0 2845 aa18.85■□□□□ 0.61
PABPN1-207ENST00000556821 ZNF816-ZNF321PA0A0X1KG74 233 aa18.84■□□□□ 0.61
PABPN1-207ENST00000556821 A0A1W2PQL4 384 aaPredicted RBP18.84■□□□□ 0.61
PABPN1-207ENST00000556821 FCN3O75636 299 aa18.84■□□□□ 0.61
PABPN1-207ENST00000556821 OR2T7P0C7T2 308 aa18.84■□□□□ 0.61
PABPN1-207ENST00000556821 PAX8Q06710 450 aa18.84■□□□□ 0.61
PABPN1-207ENST00000556821 TMED1Q13445 227 aa18.84■□□□□ 0.61
PABPN1-207ENST00000556821 TEX36Q5VZQ5 186 aa18.84■□□□□ 0.61
PABPN1-207ENST00000556821 ZDHHC23Q8IYP9 409 aa18.84■□□□□ 0.61
PABPN1-207ENST00000556821 ELMOD2Q8IZ81 293 aa18.84■□□□□ 0.61
PABPN1-207ENST00000556821 OR2T27Q8NH04 317 aa18.84■□□□□ 0.61
PABPN1-207ENST00000556821 NANPQ8TBE9 248 aa18.84■□□□□ 0.61
PABPN1-207ENST00000556821 TRUB1Q8WWH5 349 aaKnown RBP18.84■□□□□ 0.61
PABPN1-207ENST00000556821 OCEL1Q9H607 264 aa18.84■□□□□ 0.61
PABPN1-207ENST00000556821 MOB1AQ9H8S9 216 aa18.84■□□□□ 0.61
PABPN1-207ENST00000556821 SMURF1Q9HCE7 757 aa18.84■□□□□ 0.61
PABPN1-207ENST00000556821 ABCB9Q9NP78 766 aa18.84■□□□□ 0.61
PABPN1-207ENST00000556821 IMPAD1Q9NX62 359 aa18.84■□□□□ 0.61
PABPN1-207ENST00000556821 CLN8Q9UBY8 286 aa18.84■□□□□ 0.61
PABPN1-207ENST00000556821 DSCAML1Q8TD84 2053 aa18.83■□□□□ 0.61
PABPN1-207ENST00000556821 IGHV3OR15-7A0A075B7D8 119 aa18.83■□□□□ 0.6
PABPN1-207ENST00000556821 TRAV38-1A0A0B4J264 116 aa18.83■□□□□ 0.6
PABPN1-207ENST00000556821 IGHV2-70DA0A0C4DH43 119 aa18.83■□□□□ 0.6
PABPN1-207ENST00000556821 CDIPTO14735 213 aa18.83■□□□□ 0.6
PABPN1-207ENST00000556821 CFHR2P36980 270 aa18.83■□□□□ 0.6
PABPN1-207ENST00000556821 FAM76BQ5HYJ3 339 aa18.83■□□□□ 0.6
PABPN1-207ENST00000556821 SLC25A30Q5SVS4 291 aa18.83■□□□□ 0.6
PABPN1-207ENST00000556821 LIPNQ5VXI9 398 aa18.83■□□□□ 0.6
PABPN1-207ENST00000556821 COMMD2Q86X83 199 aa18.83■□□□□ 0.6
PABPN1-207ENST00000556821 OR10H4Q8NGA5 316 aa18.83■□□□□ 0.6
PABPN1-207ENST00000556821 RAB40AQ8WXH6 277 aa18.83■□□□□ 0.6
PABPN1-207ENST00000556821 RPL3LQ92901 407 aaKnown RBP18.83■□□□□ 0.6
PABPN1-207ENST00000556821 RFKQ969G6 155 aa18.83■□□□□ 0.6
PABPN1-207ENST00000556821 C9orf16Q9BUW7 83 aa18.83■□□□□ 0.6
PABPN1-207ENST00000556821 AASSQ9UDR5 926 aa18.83■□□□□ 0.6
PABPN1-207ENST00000556821 GTF2A1LQ9UNN4 478 aa18.83■□□□□ 0.6
PABPN1-207ENST00000556821 AUP1Q9Y679 476 aa18.83■□□□□ 0.6
PABPN1-207ENST00000556821 A0A1B0GTI1 187 aa18.82■□□□□ 0.6
PABPN1-207ENST00000556821 TMEM210A6NLX4 147 aa18.82■□□□□ 0.6
PABPN1-207ENST00000556821 SRRM5B3KS81 715 aa18.82■□□□□ 0.6
PABPN1-207ENST00000556821 C22orf46C9J442 243 aa18.82■□□□□ 0.6
PABPN1-207ENST00000556821 ADAM20O43506 726 aa18.82■□□□□ 0.6
PABPN1-207ENST00000556821 ENTPD6O75354 484 aa18.82■□□□□ 0.6
PABPN1-207ENST00000556821 VENTXO95231 258 aa18.82■□□□□ 0.6
PABPN1-207ENST00000556821 GYPAP02724 150 aa18.82■□□□□ 0.6
PABPN1-207ENST00000556821 KRT8P05787 483 aa18.82■□□□□ 0.6
PABPN1-207ENST00000556821 ATP6V1B1P15313 513 aa18.82■□□□□ 0.6
PABPN1-207ENST00000556821 FAHP16930 419 aa18.82■□□□□ 0.6
PABPN1-207ENST00000556821 SNRPGP62308 76 aaKnown RBP18.82■□□□□ 0.6
PABPN1-207ENST00000556821 ELF3P78545 371 aaPredicted RBP18.82■□□□□ 0.6
PABPN1-207ENST00000556821 ZNF85Q03923 595 aa18.82■□□□□ 0.6
PABPN1-207ENST00000556821 KCNJ8Q15842 424 aa18.82■□□□□ 0.6
PABPN1-207ENST00000556821 DMRTC1Q5HYR2 192 aa18.82■□□□□ 0.6
PABPN1-207ENST00000556821 KLF17Q5JT82 389 aaPredicted RBP18.82■□□□□ 0.6
PABPN1-207ENST00000556821 BCL2L15Q5TBC7 163 aa18.82■□□□□ 0.6
PABPN1-207ENST00000556821 SCCPDHQ8NBX0 429 aa18.82■□□□□ 0.6
PABPN1-207ENST00000556821 SEMA6DQ8NFY4 1073 aa18.82■□□□□ 0.6
PABPN1-207ENST00000556821 ITFG2Q969R8 447 aa18.82■□□□□ 0.6
PABPN1-207ENST00000556821 SEH1LQ96EE3 360 aa18.82■□□□□ 0.6
PABPN1-207ENST00000556821 RNF170Q96K19 258 aa18.82■□□□□ 0.6
PABPN1-207ENST00000556821 TRIM36Q9NQ86 728 aa18.82■□□□□ 0.6
PABPN1-207ENST00000556821 OR52A1Q9UKL2 312 aa18.82■□□□□ 0.6
PABPN1-207ENST00000556821 SLC22A13Q9Y226 551 aa18.82■□□□□ 0.6
PABPN1-207ENST00000556821 SNX5Q9Y5X3 404 aa18.82■□□□□ 0.6
PABPN1-207ENST00000556821 DHRS3O75911 302 aa18.81■□□□□ 0.6
PABPN1-207ENST00000556821 RGS9O75916 674 aaPredicted RBP18.81■□□□□ 0.6
PABPN1-207ENST00000556821 RPP14O95059 124 aaKnown RBP18.81■□□□□ 0.6
PABPN1-207ENST00000556821 GABRB1P18505 474 aa18.81■□□□□ 0.6
PABPN1-207ENST00000556821 OCLNQ16625 522 aa18.81■□□□□ 0.6
PABPN1-207ENST00000556821 CEP78Q5JTW2 689 aa18.81■□□□□ 0.6
PABPN1-207ENST00000556821 ZBTB37Q5TC79 503 aa18.81■□□□□ 0.6
PABPN1-207ENST00000556821 Q6ZSR3 168 aa18.81■□□□□ 0.6
PABPN1-207ENST00000556821 YIPF7Q8N8F6 280 aa18.81■□□□□ 0.6
PABPN1-207ENST00000556821 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.81■□□□□ 0.62e-8■□□□□ 10.9
PABPN1-207ENST00000556821 PIGLQ9Y2B2 252 aa18.81■□□□□ 0.6
PABPN1-207ENST00000556821 A0A1B0GW55 424 aa18.8■□□□□ 0.6
PABPN1-207ENST00000556821 DUX4L2P0CJ85 424 aa18.8■□□□□ 0.6
PABPN1-207ENST00000556821 DUX4L3P0CJ86 424 aa18.8■□□□□ 0.6
PABPN1-207ENST00000556821 DUX4L4P0CJ87 422 aa18.8■□□□□ 0.6
PABPN1-207ENST00000556821 DUX4L5P0CJ88 424 aa18.8■□□□□ 0.6
PABPN1-207ENST00000556821 DUX4L6P0CJ89 424 aa18.8■□□□□ 0.6
PABPN1-207ENST00000556821 DUX4L7P0CJ90 424 aa18.8■□□□□ 0.6
PABPN1-207ENST00000556821 MTNR1AP48039 350 aa18.8■□□□□ 0.6
PABPN1-207ENST00000556821 GPM6AP51674 278 aa18.8■□□□□ 0.6
PABPN1-207ENST00000556821 ISL1P61371 349 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms